XLOC_036035 (gene) - C. hemisphaerica

Overview
NameXLOC_036035
Unique NameXLOC_036035
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_286:463801..470539+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036035 ID=XLOC_036035|Name=XLOC_036035|organism=Clytia hemisphaerica|type=gene|length=6739bp|location=Sequence derived from alignment at scaffold_286:463801..470539+ (Clytia hemisphaerica)
TATAACTCCTACTTTTTTACTACAATTGTGTAAACTAGATCGTTTGCTTA ATGAGTCGGTTATATAAATGATTCTAATGAGGTCTTAAAAAGTGAATACC AAGATTTGGATCACGCATATGACATATACACGTGCTTGAAAGGTCTCAAA AAATTGAGGAAGTTTAAAATgtttcaaacatcaaaacagtttATCACAGT TTTCTTTTNGCTTGAAAGGTTTTAAAAAATTGAGGAAGTTTAAAATgttt caaacatcaaaacagtttatcacagttttctttttcattcattgTTTTGC CACcgcattttctcaaaattctgGTCCCTTCGATCAGTGTTATGGAGATA AAGAATTGATAAATGGCTGTAGTGTGCCCTGGGGCTTTAACTTTCCTTAT AAAGGCTTGTTTACACTCGCATGTGATTATCATGATGTCTGTTACTCTTG CGTAAGTAGCACATTAATAGACTTCATTACATTACTGACAACGCTTGCCT TGTTTTGAACTTTTACTAAGAGCTAATTTATATTTCAGACTTTCAGTTAC AATCTAATGAATATATATCACTAATTAAAAGAAAGTCATATTTCTAAATT AGTTGGTTCATCATGTCGGACCATTGTCATTAGCATGTTATTATATGTGG TGCTGTAAATCCGTTTTTGAAGAAGTAGCCGCCAATTACCATGCGGGCAT TTTTCTGTCCATTTTACCACCATAAAACCGTCCCAGTTTTTTTCccgcct aaagacaatagaaaaaagtttaaaaaaggattggatcgagtttaggttgg taaattaaataaaaaagtggCACGCGTTTGACCgcacgactacggtcgaa aagacaTGTTGAAAGAAACGGCGCCCACGAAGGTGTATTATTACAACAAA ATATTCGACTATATTGCTATGTCTCTGGCCCTTTAATGCCGCTTCGGCTT GTTGTTGTTAGTAAAATTACAAATgtgaataacttttgatagagctTTAA CTAGATCACGTGTAATTATCATGTAAatgttttgaattattttttttcaa ttttcatcttcattttggatttttcttttctaaatatttgttACCCATTA GGGTGTGAAGAAGGACGTGGAAAGAATCCCACTAGGAAATCACCCGCGGA AAGGGAAATCCTTCTTTAGCCTTCACATTTTCTCTCAATCTTCCGACGCC AACCTTCGAGTAAATTATCCTTTTTCCTCCGTCTTAACTTTATACTACGT CTATTAACActttttactctatttctttgtttaaggccggtctccacttt cacaCGAAATGGGCGATAgcttttttcttaaccttttttgtctGAAGAAA AGATTTTGTAATGAAAAAGTTTCgggcaaacaaaaaaaaaatgaaggaag ttctacttttttcatccgttacgtcaatttcgaccaatggaattgcttca tttttcaaccgaccaatgaccttacaaagaCGTCAACaattttcgctcat gtcgcgcgaaagtggagacctgCCTTtagttaaaaacaaatttgttttta cacgtttttttaataagaacatccaaaatttttgaagccttcggatgttc ttgatttttttaacttttaagccTAGAaacgttcttaacatgttcttatt ttcaccattttctgtgtatttttttccattttcctaagaaattggctgtt ttagggtccgcaaagccttaaaatattcttaacttgttcttaatatttta gccattgaagccttatgttccttatatagtttgttcttatataaaaaaag tgtgtgtgTGTGACAGGCtagttaaaaacaaatttgtttttattcgaaaG GTTAAGAGATTCACATTGGGCGATGTGAGAAAAGCGTTGGCTGTGAGAGA TTGACTGCTAGCCAACAAAATGATCTTCTGTTTCAACTGTATAGATTACT ACTCATAAAAAGTTATTCGTTTTTGAATAACACTTACTAAAGTGCAGGGC GAATTTAGtgtgaatcgcagacctctatagatgtacttcctataagaaac tttgcttcgctagaggatgagcagaagagCAGGAATGAGCAGGAAGAGGT TTCTCAACTAAGGAATAACTTCTTTTTTAGGAACTTCTTTTGACTCATCC GCTTTCGCTTTCACTTCAATCTCcaaagcaaaaatgaatgtCTCTCATCT TAAGTCCATTCGTTTTaagcaataaaaatatttctcacaAGTTATATGcc tgtgaaaaagtgaaaaaaggtaTTTCCAACGAGCTACCTCCTAGAGGCTG TAACCTAAATGGGCTAAAAAAGATTATTAAGCTCCGGTtaaggagtttct taaaatcagtatgttttttatttgtaaTAGTGTGtaaatttttttgcgtt tgaTTTCCTGATCTTTCCggtttgatttcccgatttggtttgcgtttgcg ctcgcacttactaggatatactcttttaattttcatgttagatatattaa gaaaggctgaACACGATAAAGATGTTTGCATAATGGTTCGCTATTCAATA ATGATTACCGGAGTTTATAGCAGTCATTATACGGCTGTTTTATTGTACAC TTAAATTGAATGGACTTTAATACCTATACCAAATTTCCAGAAGTGATCGA CGCTTTAATGGCTACGTTTAGACcggcctggcatttgtaattgcttgcag tattcttttgaattctattgttccgcgcaattgttcggtttgtcaaatgc ctaatgatgccagcgtgttggcatttcgttggcatttgaaatgccatttt gagcaaaggaatccccttttctgacatttcaattcaaacaaaggaaccaa aacaaagagaaaaaatgatatttttgattttctaaagtATTTGCaccttt ttattcagttctctctatagattgtaaaatttgccaGAGGGTGCtttttt cactgagactgtctggcgaaaatcgattagctgaaacaaagaaaattggt agaaaacattactaactcccaaaacagttgtcaaagcgtttacaaccctt tgaatttgaagaaaattttattaaaaatcatcaactcgcatatcaaggga tatagaattacagccttctaatgaacattttctgtgacaagattcctcgt cttttgtatcaaatcaatacagggtgtccctaattaaagtatcgagtttg aaaatgcgattgagtagaaaagtttgtgtgtgtgttatcgctaaaatata aagGTCGTGGTCCACTTAGCCTTTTTTGGTCGCCGTTCAATGCGCACGGC TCGAGCGCATTGTGCGCAGAGCGCTTTTATACTTCCattgaaaactagaa aaaagttgcgcgtaagagaaaatcaaaacaaaagcaattGTACATGATGA AAATAAACACACAATCAGTATGTTTACCTTCTCTTTGATTGGCTACTTCA TAAAGAACAATAGAAGAGACGCACAGCTTTGCGcacaaagttgaaatttt tcaactttcaaaaaagctcaCGCCGTTCATTGCGACAAGCCTTGAAGgct taatttatgcaataatcgAGCCGTGCGCGTTGTGCGGCGACCAAAAAAAG CTAAGTGGACCACGACcttaagaacgttctccatcacacaggcttattac aaaaggtagttacaacgtataaattaatcgtaatgacaaagaaaaaagag ggagagcttaaaatacaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaagagggagagcttaaa atacaattttgtgaacacgcacataaaactttctactcatagttgtgttt cgactcgatactttaattagggacaccctgtacagatgaaagtttgctct tcaactctatcgggaaagaaaacacttttcccatatgaccaattttttta caaaagaatcccactacacattctgctacttttatggcaaccaatttatt tatggtgcctttttcgcttaattggtcattaagccaatAGAAGTCTACgg gtggtttttcactgagactgtctggcgaaaatagattagctgaaacaaag aaaattgataggaaagcatttctgactcccaaaacagttctcaaagcgtt tacaaccttttgaatttgaagaaaattttattaaaaatcatcaactcgca tatcaagggatttagaattacagccttctaatgaacattttctgtgacaa gattcctcttcttttgtatcaaatcaatacagatgaaagtttgctcttca accctatcgggaaagaaaaaacttttcccatatgaccaattttttacaaa ataaccccactgcacattctgctacttttatggcaaccaatttatttatg GTGCCTTTTTCGcttggtcattaagccaagagaagtctatggtcgtgttc agacctgaaagtttaagtttaaggcttaagtagtactaagttgatatggg aattaagaaatgcaacgacttaattgctatttcatcttttagatagatTA CATAAGAGAGGAAAAAGGAATCCGCTTCGTTTTTGATGCGGAGTATGGGT CCATCGATCCatgatattctcattaaaagcccattaactacctaaattgc tagagacgctccgagcgtctctaagtcataaatttcacgttctcctttca taatttacaaaaggagcatgcttttcacttgcgaattcNNcctctcttgg agaacaaaaggtttaatgatcaattttcgacgttaaatctggaatgctaa tatgaagcgatcaaaatctgatgttaagcacgaatcttcattgtatattt tttacaaaccttagaaatttataaaaaggaccgttgatgagaaccactta tctatctagcgtagtgaaaaagcacccttaATATAATGAATGCAGTTTTA GAGAAATTTCATGCTtctcattgtttgatctgtcaaagttgaacttgagg aaatcaccttttcagtaatgactctaaaaagacgattccttaaatgccat gacagaaaatacaatggaaacaCTATTAAAATCGattccctcatgagcaa atgccaaattacaaatgccatttggtctaaacgcagccaatgCCCGTGAC ACATCGAGTACAAATCCTATGATTACTATTGATTCCAGAATCTTTAAAAT AAGCACTTCTTCCAAGGAACTTTAACCCTTCAAACCCGGGTGACGTGTAC ACACGTTCTAAATTTTACAATATACAGAGTCTCTCAGACTTTCTCTCAGA CCATTTGATTTAAAAGGTCATAAACTGAATGTTTTTGGAAAGAGTATGAA AATACCTTTCTATTGGTAAAGAAACCATTATCTAGCTCTCAAGTTACAAG CGTTTATACACCCCTGTTGCACATCtgcggtggaacttttttccccagtg gggataaaaattcctattgaaatcccaatggggatggaaattatattgtt caaaggttaaaaaaatcagTGGCTTTGgatggagtgcaatttttaaacta gcctggatatccaagctcaaaattttagaaaaaacaaaatttacctcaac atacaaagttctaaaattataagagcttggtctccctagagaatgaaagt aaaaacccatgtttcctagtcaacccagggcagcaaaacagaaattaata aaaagcagtcttacaagatctaaaactatttaaaacatccaaagattaca ctatagtccataaaaaagtttgcatgcattatcatggccaaccatgtttt cttggaaaatgaatttgcctctgttttcttctttttcatgttttcatgta acagaaagccctatcttcactagcaactggaggactatcctatttttgct ttagAATTGCTCCGCGCCGTGTAGATTGGCCCTTACGGTTTTAGAGAAGT GAGCGCAAGCAAGCGGACTGCATTCTCTTAAAGAGAATGCAAATCGCTCT AGGGAGaccaggctgtaaaccagaacataaaatattaaaaatctagactg tgaaatagtttacagcctggatatccaggctattttTAAACATGAAATCA AAGTCTATTTCCCTAAgaggctgaaattcaagggtattttttcaccgggg acgaaacttttgctaaatttcccagtagggctggggtcccagcgggtctg tgacacaagggtgtGTTTATGCCAGTTtgaatttaagttttttttcttct ccagGCTGCTGGGCTGGAATCAACACGCACTGACTGTGACAAAACATTCC TTCAAAATATGCAATATTTATGCTACAAAACCTACCCAATAACAGATAAA CCTATTTCTTCAAGAATCTCAAGAAATAAACGATCCTTTACTGCATGGCA AAAATTCATAGAGGCTCTGAAAGGAAGTGCTGCTATTGGCCTTGATTTTT GGAAATGGTTTGGTGAAACTTGGTGGACTTTGGACCATTGTTTGACTGGA GCACATGTCTATTTCAACGCTGTTAAACATTTCTCAATGGACTATTTCCA TGAGGAGCCTGAAACCAAGTGTCAAATGCCATGCGCACAAATTATGGGGA ACCCACGGTTAACTTTGAACTCGACCGATTCGaaattttaagggctctga ccatagtgaatttttcataattgccgtgtttaaaatgtgttttctgactg atgtaaccaacaaaactatggcatgttatacattttctg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057185TCONS_00057185Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057185-proteinTCONS_00057185-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:463801..470539 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.07 0 0.72 0.37 1.23 1.28 0.44 0.33 0.13 0.41 1.08 0.71 0.17 0.14 5.7 9.27 1.66 6.39 21.99 25.88 10.95 15 5 8.45 0.17 0 4.53 8.31