XLOC_036042 (gene) - C. hemisphaerica

Overview
NameXLOC_036042
Unique NameXLOC_036042
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_286:639717..643954+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036042 ID=XLOC_036042|Name=XLOC_036042|organism=Clytia hemisphaerica|type=gene|length=4238bp|location=Sequence derived from alignment at scaffold_286:639717..643954+ (Clytia hemisphaerica)
caagcaaggAACTAGAAGATAAATCAAGACACGAAAATGGTGTCATTTGA
TAGAGGGTGCTTCATTTTCTGTTTGATATCCTTGGTCATCTCATCTGTTT
ATTTGTATGCAATTGATGAAATACTCCTGGAGGAAGGTAAGTCGTGGTTT
AACTTCCTAAGATGACAATCAAACAAGATGAAAAATCATTACTTTTGTAA
ACTATTGTGAGCTGCAATAGACTCTCTATAACtggaatgtctccttaact
cgaagtTTTATAGCCCCTTCAGTTATAACAATACCTTGTACAAAAGGGGG
CTCAaaacaactttcgatctttcacttgtttgcaggatattgTTGCGTAA
AAAAAGTAGCTTTGATTTATCTGACTCAGCATGAAGACACTGCttaaaat
aagtttcttttattCCCGTAGAAAACCTTTTAACTTTGAGGTACTCTTAg
ctatacattttaaaactttacatTCAGTTTTGCCTTTCCAAAATTTATTT
GAGCTTGGTAATGTAACGTAAACTTGGTCCTTTTTCTGGTAATTCCACGA
GGGAGattatttctttttctatcTTTTATTTAAAGCCGCTGAGCTGTTTG
AAGAATCAGATTCATCGCGTGAAGATGACGACTCTGCTTTCGATATCATC
GCAAAAACCAACCAAGGTATAATATAGATTaacaaactagtctgttaata
gGCCTTATCGAAGTTTTTGATTattctaaaacagcgatgcattttgggat
tgttttgggtgtattacaatagaattccctcgaggcaTTCCTAAactatt
tgattattttcagcgggaacaaaaattagaggataattttccactgggga
cgatattttggccaatttttcagtgggaagggttcccagtgggtctgtga
gaaggggtgtgaTAAAGGTTAATAACAAGATTTCTCCTgtcttcaatttc
attttatttatgaTGATAtcttaactttctttttagCTGTTATGAATGGG
AAAAATGCATTGTTTGAAGGTGATATCCGTCTTGCTGACGGTCCTGAGGG
TGATCCAGCCAATCAGAATGCAATCCGGTCAGAAACGTTGAAGCGTGCGT
TGCGAAGAGATCAAGAGTATCTATGGATCGATCGAGTAGTTCCGTATGAT
TATTCTGATATGAAGGGTATGGATTTGTGATAACAGTAATCTTAAGGCCT
GTCGTTTTTGtgaggtcattggtcggttgaaaaatgaagcaattccattg
gtagAAATTGACGTAagggatgaaaaaagtagaacttacttcaacttttt
tttttgttcgcgcgaaacttttttatgacgtaatcttttcttcaggcaaa
acaggttaagaaaaaaactttcgcgcatttcgcgcgaaagtggagtccGG
CCTTTACGGAGCCATGGCTTGTAGAGTGAATGCGTGCATTGACGCCTTAT
GTGCTTAATTTACGGAAGCCAATGAAAGAGAAGCCTCAAGGGTTAGTGGG
GGTAACTCAAGGGAAACATAACAGATCATCTATTTTGCACACACCACGTT
ATGCTCTTAACGGATATGACGAATATGACGACCTGgccttttgcttgaaa
acgacaGCGACAGCGACcgggttctaatgtttatgaTTAGCGCTAGATTT
AGATTTTGGtacgattgttttgctttagccaatcaccgCGCTCTAAAGCT
CATTTGATATTCATtccaaatctggatgaaaagATAAAAGCGGTGCGCAA
AGTATCAGAATCTGCTTGGAAATTATACTTGTCCTTACATTTTGATCCTT
CTAtttatttttgcttattttataCTATGTCCGAAATAGTTGTCTAGCAT
GTTAAACACCAGctatttcaatcaaaaacttACCATTTCTTTTTGTATAG
AGTATGAGCGGGAAGATATTGACAAAGCGATGGCCGAAATCTCCAGTGTA
TCCTGCATTAAATTTGTTAAACATacaaatgaaagaaattgggTCCGCTT
CGTAAAAGAGAATGGGTAAGTGCACTGAACCATTATAGAGCAATCTGTCA
AAaactaggcttctgctcatcctctagcaaaaaaagtttcttatagaaat
ataggaagtatattataGTCAAAAACGAACTGTTCTCAAACTTTTCGTAA
CGACCTAATCAAATCTAAAACAAAAGCGTTTTCAATAGAAACGATCAGAA
CACTTTGGGTAATCAGAGAAGCTGGTTTTCTTTTCTATCCCATCTCTCTG
TTGAAAAAAGAGTTCCCCTAATGGCTGGCTGGTGCTACTTGAATATGACA
GAAAATACATTTGATATACCCACATCCCGCAGGTACTACTTTGCTCAAAA
CCAAAGAGAGTGTTTTTAACTTCCAGGGTCTTGATATGATAGGTCAATAG
GTAAGTGTGGCCTGTACCAGACAGACAAGACTTTTTCCAACATCTTTCTG
TCTACGCTTAACAAATATTTTCACTCCTCGCTTCtaatagcaagtttatg
tatttgcgctTTTGACGGTGACTGacgcgatttggaataacccgcagttt
tgactcACAAAATCGGGGACGATAagtgatttaccgtcgtcctcagtcag
tcaggatgtagaaaaattagaaccttaccgtctccgacGCAGAAAAACAC
CGGTAATTTTGAAGCTGTTATACAGTACAGTTTGAAGGAATTGTCATTAC
TTTAATGTTTTGTGAAACACTTTAAAAGTAATAGACAACAACTAAGCTGG
CTAATAGAACTATGATTTACTTATGACTGGTAGTGTAtatgcacttttga
ggacggcggagTGGCTGAAGCAATTTGGAAAAGCCCGCACTTCTGacctg
caaaatcgaggacggtaaaagtgctgatttaccgtcgtcctcagttggtc
atgatctagtcaaattagaaccttaccgtctccgtcgctgaaaagcacac
atacataaactcggtaatcgAAGTGCAAAGGCAGAGCATTTGGCTATGGT
GCGCGAGGTCATGGATTTAATCCCTGTACCGAAGTGGTACTTGGAGGAGC
ATCAAGATTGAAATTCCCTGTTCAGTCAATACATATTCAATATCCAAGAT
GATCGAATAGGTTTCGAGATTGAAATACCAAGTACAaaatttcccgccaa
aatttaatttttccatcatccgtcaaattaaattccttgccgatccgcca
aattaaattccttctgaaaaaactttttcggccatccggcaaattaaatt
ctcgctaaaatttcttcctttaatttACACAAATTGTAAATTTTCGCATA
AATTATGAGAAATTCACTTTACATAAAAATTTGCCTGCTTTTTCCGGGAC
ACAATGTAGAGTCAAAGTAATAACATTTTAATTAGTTTCTCTTATTTCTT
TTTCTCAGATGCTGGTCCTCTGTTGGACGATTGTTTTGGGGGTCTTTCGG
ACAAAAAATTAGTCTTGGCTCAGGATGTTTCAAGCATGGGATAATTATTC
ATGAAATTCTTCATGCATTGGGTTTCTGGCATGAGCAAAGTCGTCCTGAT
CGCAATCAATATGTTCAAATTATGTGGGAAAATATTGCTGATGGTCAGTT
TGTTCCTTTGATACAACTTTTTATTTGGACTTTTTTCTGATTGACGTTCT
CGAATTCGATTTTTAGGGTAATTTGATTTTCACTGAATAAAGGAGCGTAT
CGAAAAGTAAagcatcgaattagagagcgccaaCAGTAGTttgtttaaag
aaaacatttatcAGAGTCTTCATGCTGACttgcctgtaccagacgaccac
ggctttttcctcgacaccgttCCGTCTGTTACTTGCTTTTTACAATTATT
CCCCCAGAGATCTTTGGGGGGATAAAAATCCTCGGCTTTAAGCCAAAGAA
CCGTAGCTTTCGactgtaaaaaaaaactaaccAAAAGAATCTGTCAACGT
AAAGGAGAGTTTCAGTAAACAAAGCACAGACTGATAAAAAATCGCGTTTT
GGGATAGAGATAGGCCTGCTgacaaagttttttatttttattttttaggt
cAAGCAcacaatttcgaaaaatatagtAACGAAAGAGTTGACGATTTGGG
ATCAATATATGATTATTCTTCTATTATGcattatggtaaaaagggatTTT
CCAAGAATGATAAACCCACCATTTTGGTAATTGGTGATCCAAATCAACAG
CTTGGCCAACGTGATAAACTATCAACAGAAGATATCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057196TCONS_00057196Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057196-proteinTCONS_00057196-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:639717..643954 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.3	2.55	2.01	1.57	6.49	4.46	4.37	4.66	1.01	9.56	2.33	1.01	0	0	0.03	0.06	9.74	20.57	0.17	0	0.66	0.37	0.96	1.42	0.22	0.3	0.14	0.38	0.81	0.65