XLOC_036055 (gene) - C. hemisphaerica

Overview
NameXLOC_036055
Unique NameXLOC_036055
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_286:114573..117891-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036055 ID=XLOC_036055|Name=XLOC_036055|organism=Clytia hemisphaerica|type=gene|length=3319bp|location=Sequence derived from alignment at scaffold_286:114573..117891- (Clytia hemisphaerica)
GTAAAAATTTCTATGAAAGAAGTAAGTCAAGAACAAGATATGGTGTCTTA
CGAAGGGCCATTCTCAAAACCATGGCAGGACAGTGATACAGTTTTGATTG
TGGAAGAAAAAGACCTTCACGTTCATTCGAATATTTTATCCATCGCTTCC
CCTTACTTCGAAAAAATGTTCAATGGAAATTTCAAAGAATCGCAAACCAA
ACGAGTTACTTTGGAAGGGAAATCTTTTGAGCTGATTGAGCAAATGTTGA
AGATTATTTATCCAAATGTGGATGCAGAATTTGGTAATGAATTTACTTTG
ATTTAGTTGTGTTATTAAAAAGAAGAAAACAGTGGACTTTTTTTGCAAAA
ACAAACTAAAAAGGCTTTTATGGTCAAAATGTTAAGAACAAGTTGAGAAC
ATTTTAATCAACATCGAGTGTTGTTCTTAGGAGTTTACAGAAAATTGTAA
AAACAAGAACATTTTTAAAAGTATGTCTTTATATTAAGCTTAACACTCGA
AAAGTAACTCGGCTAGAACGCTTAAGGCATCAAAATGCAGGCGCCATAGC
ACCACTTAGAGAGCAGCTTTAAGACTAAAAAGGAGCCAGAAATTGTCCAC
GCCGACGGAAAAAATTCTTTTGACCTTCGACACTTCCAACGCCAATTCTT
CAAGGTTGTAAAGAAAATTTTACTTCATTGATACATTGCTGTGTTGCTTT
ACGAAGAAGGCCCAAGGTCAAACGCCTCTCCGCCTCGCGCCCGCGCTTAA
TAAAGCGTGGATCAAAATAGAACTATTGATTATACTAGATAAAATTACTT
CTTTATTATTTGCAATGTCAGAATTTAACACGAAGCTGTGTGATGGTTGT
TACCCAGAAGCGAACAACAAAAGGATACAACCATGTGAAGATTGCACATT
AGCTGAAGGTATAATAGTATTCTTTTTTTTTTTTATTCGCCCCATTACTA
CTGCCCGTTGGCTAGACGCAAAAACCTCCAAAATTTCAGTATAATAGAAA
GTCGTTATCAGAGCGCGGTGGTCCTTATTACCCATAATTCCTTCCGACCG
TGAAATGGCCCAAGCTAACAAATTTAGAAATTTGAAGTCATTCAGCAAAC
TTTATCCCAATTCTCTTGTGGCATTACAGTTAATGAGGCCCCCCTCCAAG
CAGTTTTCGTGATGACGTGATAGGGACTTTTTTGCAGCGTGATTACGGGA
TTTGGAAATTTTTTCTTCGTGATTGCGTGATGAGAGGTCAAAACGTGATC
GTGATTTGAAAGATTTTTGAGCCGTGATACGTGATTTAGACTATTTCAAA
TTGATGCGTGATTGTCCTTTTATTTTCTGATTTGCGTGATCGCGATTGAA
GACAAAAATTGCGATCAGAGTTACCGGTGGGGGAGGGGGGGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCGGTGGGGGGGGGGGTCGT
TCATACATCTATTTGAATGTTGTGTTGGAAACTTCTAGCATCTAATGGTA
TTTTTATCTCGATCCTCCGTCCAATATATTTGATTATTATTAATAGGATT
GAACTCGTTGTGTGCAAAATGTGTCGTCCCCGGAACAGAATTATGTCCAA
AATGCAAGAATTACTTTTTCAAATCAGGTATCAGAATTTGAATTCATTTT
ATCAGTTACATTTTAAGAGATACATATCCCAAGTGGCACACAACGATGAA
CGTCAGGGACCTTAGATGGACGCTGTAATGACGTTATGTGTCGGCTTGGA
CAGTATGTAAAACTTTCAGTTGAAAATTGAATCAAATAGTAGTATCATAG
AATTATTATCAATTCACTGGTATACTACCAATTCTCTCGTCGATTCAGTC
CAAGTATAACTCTCGAGTACTTAATAACCGTCTTCCCCGCTAATTTATTT
TTCGAAAATTTCCCACCCAGGACATTTTTACGTTCAGAATGATAAGCAGA
AAAACTATCATTTAAAAACACCACTAATTTCTTTAGAAGAGGGTCGATCA
CAACATTTCGAATGTTTGAGGAATCTGTCCAAATTACGTGATGAATACAT
TATTTCCTCATTGGAAAGGATCGTCGATGCCGAAGTTCTCTCTATGAGCA
AGTCTTTGGATGGGTATACAATCGAGTACACAATGGAACTATTAGAATTG
GCAGACCATCTGCAACATCAAGAATCGGCTGACCTCTGTATACAGAATTT
GACATCTCGATTAAGCAGCTATGGCACTTGTACCGATGATGGAGGAAACA
TAAGAAATGTGACTTTCGGGAAAAACATCAGTCCGAAATCAAAGAACAAA
TTGAAAGGTTTGATAATGAAAAAGAGAATCGACGAAGTAGAAAAAGAAAT
AGAACAGCTTGAGCAGAATGGCGATCAAAGCAAAACCACAACCCAAAAAT
CTGGCGGTTTTTCCTTTGGGCAGCAGCAAGTGCCAGCCCGTTCTCATAGA
CGAGTTGATGTTAGCCCACTTAGAGACGCGCTTAAAGATCTGAAAATTTT
AGCCAAAGACCTGACCGTCTGAGACAATAATTTACCTGGAGAAAGATCGG
TCAGACCTTTTTTGTGATTATATATTACTATTGAGATAAAAATGAGCTGT
ACTTTTAACAGTCGAAAGAACACATATTTTTTGTTTTCCTTTTGTTTACT
GGAAGTCAAATCTGGACCTCCCAGACGCTGCAGGCTTTGATAACCAGCAT
ATCACTACGACTATGATTGATAAATGTGTTACAATGTAGAATTGACGTCC
TAAGAATAACAAAAAATTTTTTTTTAAAGATTACCTCATCACCCAACGTG
AGTTGTCTTTGTTAGCGAATTCCAAATTACACCTGGTGCCGTAAGAACCA
CCACGGAACGATTGTAAAAAGTTAGAATCGGAGACAGGTGTACCGCATTC
GTACCATAATACTTTGCCTTTGACTTGAGGAACCTATTGTCGTGTAAACA
GATATGAAATGATATAAAACAAGTAATACTTTAATGGACCTACCTATTTA
TAAAACGAATAATTAGAATTTAATGGAAGTAATGTATAATTTTAAATTTC
GATTTATATATCTATTGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057233TCONS_00057233Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057233-proteinTCONS_00057233-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:114573..117891 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.48	0.32	1.2	1.1	0.67	0.71	1.16	0.84	2.55	6.72	0.94	1.68	3.12	2.4	11.43	4.95	5.87	8.17	7.39	7.7	1.53	1.65	1.54	2.79	8.07	9.77	1.32	1.39	1.76	1.29