XLOC_036112 (gene) - C. hemisphaerica

Overview
NameXLOC_036112
Unique NameXLOC_036112
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_286:877927..881422-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036112 ID=XLOC_036112|Name=XLOC_036112|organism=Clytia hemisphaerica|type=gene|length=3496bp|location=Sequence derived from alignment at scaffold_286:877927..881422- (Clytia hemisphaerica)
TTTGGCCACAAAAACTCTTTGTCATTTTGTTTTTATAAAACAATCATATA
ACAAACTATGATTATAATAACCTACTCTTATCACCCTTTCGAACTGATTT
GGATTGACACCAAAGAGAAAAGAGACAAACTTTCACGATTTTTAATGACT
TAATAAACAAATCTGTCAAAAATGACAATTATGAGGCTGTCAGTACAGAA
AGAATAAACTAAAAATTTGTCACGAAATTTGATTTTCGAGATGTGATATC
GTGACAAAAAAATGTTTGACAATTTAATTTTTTATCTATAACTTTGTTTA
CAATGTGGCAAATATAGGAAGGGTTTAAAATTTAGTTACTTTTTTTTCAA
ACAAACACTAGAAGTATAAGAAGTTTTATATTTGAGAAACTTAAATTTTG
ATGTCACTTCGAAATCATCATTGATACAAATCTCGCAATGAAGAACTAGT
TGCTTCAATTCAACTTGCATACATATTGTATTGAAATGTAGACGGTGTAC
CTTGCATCTCTGATTTGTAAAATCAAAGATTCGTTATCCATGAAGCTTGG
AGCTACTTTGTGATAATAACCGCATCAGAGATTGGTTTGCAGCTGGTCAT
ATTTTACATACTTTTACATGCTACCCCTTTAAATACCTTGGTATAAATGC
TAATTGCTATTGATTATATTATCTTTTACCACCATTTTAAGCATGGATGA
TATATCTATGGTAGTTCTTTTATTGGCTCTCATTGTATTATTTTTCTTGG
CTCGTGGACTTGTTGGATTGAAGCTATTTCAACGTTGCGTATTTTTATCC
AAAAAGAACGGGCAAAGACCAAACCTGATCGTCATTTCAAAATCTGAAGA
TGTCACAAACTCCAAGAAATACATTTTCGATAATGCCATCAAAACGTATC
AACTACCTTTGAAGTTTCTGGTAATTCTACCAAAGCCATCAGTGAACACT
GTATTCACCATGTACATTGGAAAACCTATCGAAGATAAAACTCAACCATA
CAACAAACTATGTCCTTTATGCTTAGACGAGTTGAATACAATGACTACAA
ACTGTTTTACTGTCAATTGTGGACATTCTTATCATCAAGTATGTGCTGTT
AATCTCTTTCTGAAAGAGACTAAAACATGTCCTTTATGCAAACAAGGGAT
TGAAAAACGCGTTAAAAAGGTCTTTGGAAAAGAGACAAAGATTGACACAT
TAGCTAAGTTCTATGGCTCTACTATATCGACAACTTTAAATTCTGAGGCA
GATTTAGTTTGATTAAACACTATAAAGGACTTGAAGACCCTTGAAGTTCA
AAACATTTTTGGAACAAAAAGGAAAAAACTGTGTTTCATACTTTCAGATG
ATATCCAAAATAGTATATTAGGTACATTTTGTAAATATAATTTGTCATAA
TATAAAAAATACTACTACAAGGTGTCCCTAATACACTCTTCTCGAGATGT
TTTTGCGCGGCATGAAAACGAGGCCAGCAATGATATTTTGTAAACATTAT
ACAAAGTGGCGAACGAAAGCGGTGCTGTTCAAGAGCTTTTTGGATGAACT
TCTTCTAAACACTGAAAGATCTATTGAAATTATTGTTGAAAAAGAACAAA
ACATTGAATGGACTAAACATTTAACTAATCTTCCTTTGTTTACAAAAAGA
GAGATCGAATTACATCGACAAAAGAGTGGCAAAAATGCACGATCAATCAT
CAAAACAAGAGATCAAGGTTTAAAATTCAAAAACGAAGGATATGTTATAA
AAGATCAAATGTATACAAAGACTTCCTCACTATTTTTTACTGTCAAAGCT
GAATGTAGATCGAGCATGATACAAGAAAAAAAAACATTTGGAAGTTGTTC
TAAATAGACTTAATGGAGAAGTTTTCAGTGGAACGTGTGATTGTGCTGCA
GGCAATTCTTCGTATTGCAATCATATAATGGCTCTGTTATTTGAACTAGC
AGATTTTTCGTTACGTGAGATAAAGACAGTTCCTGAGGATATTGCCTGCA
CAAGCGGGCCACGGCAATGGGGAACCCACCCCTCGGACAAGTTAAAGTAT
CCTGAGGCGGTCATGGACATTTCTATTCGAAAAGGAAACAGCAGAGGTGT
TTCAAGCACTCTTTACAACCCACGTATTAACACAAAAATTGACAATTTGG
TACATAGGGCTGCCAAAGCCCATTTGAACCTTCTTCNGTGGATTTTGTTT
AGGGTTAGTTGGGATCTTGAAAAATCCAATTTCAGTTTTGGTCATGTCAA
TGTTATAAAAACTGCTCTTGCATTCGGGTATACAACAATATGCACCTTTT
CCTCCTTTCAAAACTTTTCCAGGTCGCGCAGCAGACGATCAAGCATACTC
CTCAGAAGCCATTTTTAACTAAAGACACATAAAATTTTGTTTCTATTCAC
TGAAAATCTTTACTCATTTTGGTTTTTTCTTCTATAAACAAACACTAAAT
TTTTTTTATATTCTAATCCCTCATACCATCCATTCCATAAAAAACTTCAC
AGAAAGATCAATTTTCTCACAAAAGAAAGCATATTATTTTCATTCAAATT
TCTTGTGTAAACATATAAAGAATAAATAATAAGAAAAATTCAAAGGAATG
AGAAAAGAAAAGAGAAAAGAAGACATATTTTGTAAACTGTTATGGGAATT
TATAAGAGGCCCCCCCAGCGGTTGGCGTGATGGAGGGTTTTTCGTGGNAT
GGGAATTTATAAGATTTCCCGCTAGAAAAAAAGTTTGTTTTGATTTTTAT
CATTTCTGGCCTCGTTTTCATGCCGAGCGAAAACATCTCGAGAAGAGTGT
ATTAAAGTATCGAGTCGAAACACAACTATGAGTAGAAAGTTTTATGTGCG
TGTTCACAAAATTGTATCTTAAGCTCTCCCTCTTTTTTCTTTGTCATTAC
GATTAATTTATACGTTGTAACTACCTTTAGTAATAAGCCTGTGTGATGGA
GAACGTTCTTATATTTTAGCGATAACACACACAAACTTTTCTACTCAATC
GCATGTTCAAACTCGATACTTTAATTAGGGACACCCTGTATATCAATACA
AAATCCTTAGCGAAGGTGCAATTGAAAAACTATAGGGGATGTGGTTCCAG
GGTTGAGACTTTTCGCGGCAATGATTTCTTGTTCTGCAGTTTTTCCCGAA
ATCCTGATCTACCGACTTTATGGATTGAAATTATACAGATTAAGTGGTGT
TTCGGTGCAGTGGAGCTTTTTAATTAAGTCTGGGTTGAAATTCTCCATCA
AAATTAAATCAATACATAAAATCGACGGAATGAGGTCCTCGGAAGCAACT
AAGTTTGACAAGACTCGACCGGGTTTGTGATACAGGGGTGTATATGAAAA
AAATTCAGTAATAGGGGGGGGTTTGTACTTTTTCGGTGTGACGGGATTGG
CCCTTTTATAGTACGGTATTACGGGATTTGACGAAAAAAGAGACGGGAAA
ACGGTATTTTAAAATCAGACGGTGACGGTATTTAGGTACATTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057307TCONS_00057307Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057307-proteinTCONS_00057307-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:877927..881422 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.36	7.15	4.57	3.56	32.33	21.07	14.79	14.15	7.24	4.55	3.76	5.39	1.94	1.92	1.35	1.16	3.49	3.09	2.23	1.6	1.24	1.26	5.83	5.65	1.21	1.67	2.83	1.3	3.35	3.31