XLOC_036132 (gene) - C. hemisphaerica

Overview
NameXLOC_036132
Unique NameXLOC_036132
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_288:692067..697571+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036132 ID=XLOC_036132|Name=XLOC_036132|organism=Clytia hemisphaerica|type=gene|length=5505bp|location=Sequence derived from alignment at scaffold_288:692067..697571+ (Clytia hemisphaerica)
CTCAATTTCTTTGTTTACTCATTCATAACTTTGTCAACGATGTAGGACAA ATTTAGTGTGTCAACTTTTTATAGACAGAGGCGACGAGACATTTCTTTCT GGCAAGATTAAAGGAGGCGTGAGAGACATCGATTGAGCACTTGTTGTAGT TTATGATCACCACCATTGAAGGCTTTTGAAACTTTAAAACACTGTTCATG ATAATTGGTGATAAATCCTCGGGCTAACAGGAAATTGAGAGATTATCAAG CGGAAAAGAAGTGTTGAGATTATAAACTTTTGGTTTTGCGAGTGTTTTTT GTGTTATTTAACGAATAAATAcattatttttattgatttcacGAATGATG AATAGTCAAAATACACAACAAACTATCATTTCAGGTGCTAAGACTGAGAC CATCTTGGAAGAAGAGGCTACTGGTGAAAATACACACGAGTCTGTATCTT CTGAGGAGGAAGGGGGAAATTCTCCTCTAAACCGAAGCTTTAATATGAAT CGTCGATCGGAGATCTCGTCAGCTCAATCTACACCGAAAATTGAGAAAGC TTTGATGAATAGATCCAGTGAGCTGATAAAGGAGTTCGCTCCGCCTTCCA TGGAGTATAGTTATTATGTTATTGCATCTCCAGTAGTTGGGCGCCGTAAA GTTTCCGCCACAAATAGCGCCCCATCGTCTAATATGACAAGTAGAAGTTA TTCATTCGTATCCATGTCTTCGAGGGACTCGCAATCATCATCAGAAGTTT CGGCTGTTGTTCAGCCACGTAAAAGAGCACCAAAATCACGAGGCTTGTTA CAGTCTGTTAAAGAAAAACTATTAGCTGAAATTGAGAATATCAATGTAGA ACTCGTCAAAATGGATTCTGAAAAACTTGTTTTGGTGAATTTACGAAATG CTTCTTTGCTTTATCGAGATATGATATGTAAATCAGAACGTAATAATCAA GGGATACCGAATGCTGGTAAGTTACGAGCATCTTGCGAGAGTATCGAGTT GAAAATACAAGATGAGGAGCATGCATTGCAGGACGATTTAGCGATACCAT CAATTGATGAAATTCGAAAGGACTTGAAAGAGATTTTAAAAGTCTGTAGC GTTATTACAAACAATAAATCAACGAATATGAAAATGACTTTAGTTGAGGA ATTGTTATGTGCTGTTGGAAAGTTGTATGGGGTGGTGGATACTATTTTGG TGATTTTCTATGAAGATTTGAATGATGATGATTCAGATGATGGTCTTGAG AATACTGGTGAAAGAGGGGATGAGGTTGACAATGTAGTGGAATGCAAAGA AAGTGGTGGTGAAATTTCACCAGTTGCTTCGTCGCCAGAGCTGGCAGTGG ATGTGAGTATAGTTGGATTTATTTATATTCTGAAAGTACATATTTAGTAA ACAGTGCCTGTCTATGTACAGATATTTACAAAACATGATTTCTAACCTTA AAAGGTAAAGtattatttgacattttttctcTAGGCAGCTCGATACGGTG AGGTTTATTCTGTTCACACTTTCGAAATTCGAACCCCGTCTAAAACGGTG AAGATCATAGACATTTAATCAGTTCTACAGCTAAAAAATTCAACAAGCTT TATACGGTCGGTTTGCAAAGATTAAAAATGAAATGGAAAAGTTGTGGTAA CAAAGTTGTTTTTCCGTCCCCTATTAGAAATTCCCTTTAATGCGGATTCT TTTCCGCCATAAGGAAGATTTGAGATCGAGGAAGTAGGATCAATAACGTT TGtctgaatttttattttcaaagtatAATCATATaactttataatttgaa aaaagtttaacattGAGGTCATTTTATCCCCTCATTTCGAAAGTCTAGTC CAAAATGTTTAATCCTTCCAACCTTGAACGTGTCTTGatatttgatttga atttctcgagaaAGCTCTTAAGTTTTAAACATTTCATCATATGGTTTTAA AAACCAAGACAACCGAAAGAAATCTAATCCCAAGGAAACAGACGAGCATA CTAGCGAACAGTATGCTCTCTAGCAGTTTATTCTTGATTAGTGAGGCGAT TTATTCCAATATCCAAAATCCAAAAGTAGTATGAAATAATCCAAATTTTA TGAACTATCAAAATATAcgctattttttgaaagaactTGNTAATGAAATT CCGAAGCGTATACAGATCAGGTTGATAATTTGTATCTGTTCCCAAATTTA AGTCAATGATAAACTAAagtcgaaaatattttgatgttgaaAGGATGATT AGCGAAAAGATGACGTAATGAAAACGATTTTTGGTTGGATAAAATAATTA CGCATGCTCAAGGgcaaaaaaacaattacaaaaaaacaaaagatgtcTAC CGTGTTTTCcagttaaatcttttttatgttgtaatattattatataattt aaattctataaaaataatcatattgtgTAAATTCCTAAAAGTCAACAGAA AAATTTGNTCTAGCAGTTTATTCTTGATTAGTGAGGCGATTTATTCCAAT ATCCAAAATCCAAAAGTAGTATGAAATAATCCAAATTTTATGAACTATCA AAATATAcgctattttttgaaagaactTGAAAAATCACGATAAAAAATTC ACTAACCATGTTCATACAGACCTTAAGAAGACCTGGAATATGTAGGCTtt taaaaacactgaaaaaccaGGTTTTTACTCAGCACTCCTAACTCCATGCT GACTTTTTCTGAGCTACTGTACATTTTAAAATCACCTATCCAGGTTTACT CATTGGGTCTTTATCCAAACCCTCAATTAACTCATTTTAATTGAActcct tttaaactttttcaggAAAGTGAAAACGTAGAGGAGAACCGAGCAAACGA AACCAACAACACAACAATAGAATCCATCATCGAAAATCGAACGAACGGAG CACGTGACTCATCATTCTGTTTAAAAGGCGACCAATCAGCTTCAAGCATT TCAATCGATTTAAGCGGGAAAATTGGAGAAGAATTAAAACATCTACAGAA AAAATTATCCAAAgcgaaaaaacttttcaaagggATAGAAAGACTTTCTT CAGGTAATCCTAAACCGAAATCACTTAGCTTGTGTTTTAAAGAAATCAAC TCTACGATAACGGAGGAATTGATTAGAGAGCTAAGCTATGAAGAAGCTTG GTGCCAGGTTATCAAGAAGAACGTAGTTGATCTTCAGAAACATTTGATGG CAGAGAGACCTGGTGAAAGAGAACTAGAACACATTAAAATCATCGTCGGT GAACTAACCGGTCGAATCTCCATAATTATGAAAAGTAATATGTTGGAGTA GCAAATGGTATCAATTCTACTGTCGGCTGCCATTTATGTGAAAAGGTTAA CAGTTTATTTCAAGATTCGCTTTAAGTTGAAAAGAAgatcaattcaattc aatgaAATTCCGAAGGGTATACAGATCAGGTTGATAATTTGTATCTGTTC CCGAATTTAAGTCAATGATAAACTAAagtcgaaaatattttgatgttgaa AGGATGATTAGCGAAAAGATGACGTAATGAAAACGATTTTTGGTTGGATA AAATGATTACGCATGCTCaagggcaaaaaaaaaacagaaaacaaaaaaca aaagatgtCTACCGTGTTTTCCAGTTAATCTTTTTTATGTtgtaatatta ttatataatttaaattctataaaaataatcatattgtgTAAATTCCTAAA AGTCAACagaaaaatttgcaataaaaagagacaaaacccTGTAAGACGTT TATAGAAATAAGGTAAACACTAGCCTTTTCCTTGGATATTCTAAGATAGC AGTTTTGGTTGGCACTTTATAACTTTATAATTTCTTTGCTCTTCTAAAAA CCTGAGGTTGTTTTGCGTAAAGACTTCACTTTCATCTGTCCCTAAATTAA GCTTCGATAGCCAAAGTCTGCTCAGCTTGTAAGATATTGAGGAGATTTCA TATTTGTacgtagaaaaaattaaattatacaCAAAACAAccgataaaaat aaattaatgcTAGAATTAAACAGAAAATGATCTCAAGGCTTCGAGAACAT AATCTTGGTTTGAGAACTCTACCCCTAACTAGTCGACATGCAATACTTTA TAGTACAATGTAACGATATGGCTCCATTGATTATGTCATTGTGTCAACGT GAGTAGTCNCAGAGAGCTAAGCTATGAAGAAGCTTGGTGCCAGGTTATCA AGAAGAACGTAGTTGATCTTCAGAAACATTTGATGGCAGAGAGACCTGGT GAAAGAGAATTAGAACACATTAAAATCATCGTCGGTGAACTAACCGGTCG AATCTCCATAATTATGAAAAGTAATATGTTGGAGTAGCAAATGGTATCAA TTCTACTGTCGGCTGCCATTTATGTGAAAAGGTTAACAGTTTATTTCAAG ATTCGCTTTAAGTTGAAAAGAAgatcaattcaattcaatgaAATTCCGAA GGGTATACAGATCAGGTTGATAATTTGTATCTGTTCCCGAATTTAAGTCA ATGATAAACTAAagtcgaaaatattttgatgttgaaAGGATGATTAGCGA AAAGATGACGTAATGAAAACGATTTTTGGTTGGATAAAATGATTACGCAT GCTCaagggcaaaaaaaaaacagaaaacaaaaaacaaaagatgtCTACCG TGTTTTCCAGTTAATCTTTTTTATGTtgtaatattattatataatttaaa ttctataaaaataatcatattgtgTAAATTCCTAAAAGTCAACagaaaaa tttgcaataaaaagagacaaaacccTGTAAGACGTTTATAGAAATAAGGT AAACACTAGCCTTTTCCTTGGATATTCTAAGATAGCAGTTTTGGTTGGCA CTTTATAACTTTATAATTTCTTTGCTCTTCTAAAAACCTGAGGTTGTTTT GCGTAAAGACTTCACTTTCATCTGTCCCTAAATTAAGCTTCGATAGCCAA AGTCTGCTCAGCTTGTAAGATATTGAGGAGATTTCATATTTGTacgtaga aaaaattaaattatacaCAAAACAAccgataaaaataaattaatgcTAGA ATTAAACAGAAAATGATCTCAAGGCTTCGAGAACATAATCTTGGTTTGAG AACTCTACCCCTAACTAGTCGACATGCAATACTTTATAGTACAATGTAAC GATATGGCTCCATTGATTATGTCATTGTGTCAACGTGAGTAGTCAATTGA GATCGAATTTTTTTACCTGAGTGACCTAAAGGATGTCATAATCACCTTAA AGCTTTATTTTCTGCTTATTCAGCAAATTGTAAAAGCAAAGTGTTTCTTT AAAAAGTAAAGCATATGCAACCTCTACAAAACCAGACTATTCAAAAATAT TGATGTAATTATCGACTTTCGTTTTATTTCGTTGCGAGATGCATTCGGAT ATCCAAACGATGTTTCGACATTCTTGTTCCTTCAGTTTGACGTAAGCGTA AAAAACACCGAAGTGAAATTGTTGCATGAACGAGTTCACGTTCAGTTTGA CCtga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057339TCONS_00057339Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057339-proteinTCONS_00057339-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:692067..697571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.01 0 0.03 12.21 9.36 2.64 3.43 0.7 0.67 0.39 0.6 3.94 3.9 1.66 1.91 5.53 5.67 4.73 5.42 1.36 1.33 0.92 0.98 1.29 1.97 1.35 1.1 4.45 3.49