XLOC_036350 (gene) - C. hemisphaerica

Overview
NameXLOC_036350
Unique NameXLOC_036350
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_295:2550..8222+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036350 ID=XLOC_036350|Name=XLOC_036350|organism=Clytia hemisphaerica|type=gene|length=5673bp|location=Sequence derived from alignment at scaffold_295:2550..8222+ (Clytia hemisphaerica)
ATCAagctcttcttcatttttcagaaaaaagagaAGATAATCTTTGCAAG AATGCACTGGTGGGAAACTGATGACCCTGGTGGTCTCAACTACACTGAAC ATAACACCTATTTGAATTTCGAAACAACTTATAAAAGGTTAGTTTGTATC TCCATTCACTGTCCATCATCCAAAGGCTCGAATTCATTTCATATTGCACC TGTGATTGATGTTTTGAACGTGGGTAGTTTGATAATCTAGAACTTTAGAT TATTTTTATCGGTTCAACGGCCAGCAAACTATCAATGTCACCTGTACCTG TTTGGTCAGCGCTCTTTTCGACCTGCCCCAGTTACCTTAAGTTCAATAgg gtcatatttttttaataacgCGATGGAAAAAGCAAATGACCCAGAATGAA CAGTCTTTGACTTGTTTTCTTGGTACAGCTTCCCGGGAAGCACTATTTCT CAAAAAACGGTTTTACGGGCTATTTCGGCTATTTTGGCTATTTCAGGTAG TTTGTCCAATGAATGTTTTTTATATGTAAGAAAAAAGTGTATAAGAACGT AATGCTACAGTACAAGGCCCGAAATCTAGGAAAGGAATtctaggaacatt ttaaggctttacagatATAACCTCCGGACACGTGAGGATTCTTATCCAAG AAAATATAATAGAGACAATTCCGATGTATGCTGCTTAAAGCACACGTGTT AACTCCTACAAGGTAGTCAACCCTATCGAACACACTCGAACGATAGGTGT TTATGTCTTCAAATTCACCCTgttaaagaaatattattttcatatcACAG GTTACCGTCTGCTCCGACCATCAGTCTTCATCAAAAGGCCCTATTTACAT TTTGGATGTCATGTATTGCAGCATGGTTTACATTGCAAGTGGCGAAATTA TTCTTACTTGTCATGCGCAGAACGGACCAATCAGATTACAAGCATGTCAA TGATGACGACATTGAAAATAGCAAAAGTCCAAAGTTCAGTACTAAATCTG ATGACACTGGAGAAGGTTAAGCAAACTTGTTGATTAGTTCCTGTTCCTTG TCTTCCTTAGTCTGAGTCAcaaacctctacaaaaccccaggagCAGGAAT TCCTTATACCCACCATCTTTGATTAATTAAagtatcccagctggcacaca acgtcgtttaaacgtttttctaatattcacaacgtccatataacgttaga tgaacgttgaaacaacgttgtgtgtcagctgggatgtAGAAAAGCCTTAC CCNTaaacctctacaaaaccccaggagCAGGAATTCCTTATACCCACCAT CTTTGATTAATTAAagtatcccagctggcacacaacgtcgtttcaacgtt tttctaatattcacaacgtccatataacgttagatgaacgttgaaacaac gttgtgtgtcagctgggatgtAGAAAAGCCTTACCCATTCAATATGGGTA CTTCCAAAGCACTCTCCTTTATAAAAAAGGCAGTACCACTTCGAGTAATT CCAGGtttccgatcaaagattttgattaaATGAGAAACTATGACTTACGT ATACTCCAAAGAAGTAGTAGACTTTGGTCAAAAAATGACCGCTAGTTTTA CGAGGGTTTTTTAATGATAGCAGAGTTGtgttcatttttttaataagttg CTTTTTAAGTGTGCTCTTTTCTTACTGCCATGTGGACACCATTCTCAAGG GAATTAGTCTTAAATTCACTGGTATGGATTCCACATTGTAGCAAAAAAGT GGATGTTGCCTAACATAGGGTGTCAGCTATATGTAATGTCGGTGAATTAA TACTTACTGTGAGTTTACTAATACTGTGTTACGTTATTATTAAAACTCAC GAATGTATGATATTTCTGTTTTAGGGGAAGACAGTACAACGCAAGGACCT TTTATACAAACCGTCATCATCAAGATCAAGAAGATATGTTTTTCACATGA TAAAGACCAACCAAAGTTGGAACAGTTCTTGTTCAAAATGATGTTGTTTG GAGCGTTCATGTTTTATTTCTGGCTATGTGATGGTCTTAGGATATGGTAG GTCTGTGATTTACGCGCATGCGTAACGTTTCCCGAAAGTCCTTATCTAAT CTTCGTTATTTTTCGCCTTGTTAATTTAACGGCTTTTTTCTGAGATTGCT TGGACCCCCTTAACATCTTTTATGTGTTTGTATCTTTTATATACACGCTT TTATATATTTCCTTTTCACTGTCCATGCTTTGATTTCACACGCCTTGAAA ATTAAGTAACTAAGAAAGATTATTATTTTTAGCTCTCGCCAAAATAATTC ATTTCTCTAAAAATCATTCTGTTTTCAGGCCCAAAGTGGAGAAGCACTAT TCAAGAGACATGTTCGTCTTTTTATTCTTCTTGTTGGTGTTCGTGGCGTT TGTTTTAACCATTCGAAAAACGAAGGATCAACTCCTCGTGAGGGATCAAA CGGAAGAATGGAAAGGCTGGATGCAGGTAAGGAGCTTTCGACATTACTGA CACTTAAACCAACCTTTTGCTGACCAGGCTTTTTAGGGTTCTTATCTTCA CAGGAACCTTTGAATAATGCTTTAAGGATTTTGCTTCTGATGGTCTGGTT TAAATAGTTTATTGTGTTCAAAAGAAGCCTGTTTGGGAAACCTATAGGGT CAATCCACTACATTTCTTATTCTAAACATGGTGAAAGAACACATTATTTT ATTCAGGTTCAATTTGTGTGGTATCATTACTTCAATGCTCAAGAAGTGTT CAATTCTGTTCGTGTGTATGTTGGTGCGTATGTCTGGATGACCGGATATG GTGAGAAAATATATTCTGTCACTCTCCCGGTAGGGGTGGGTACTAGCGTT AGAGAATGTCGGATATGTGCGAACCAGACCTCTGAAGATCGACCCTTACA GAGACAGTTTTCAGAAAAATTCCCTAACCTTAGAGAGattctttttactt ttcatgGTTTTAGATAGATTTGGGATGATCAAAAACTAACCCTTACCGTA TTCTTGCCTAAGTTACCTTCTGGCTTAATCTTTAAGGATAAGAGGGGGAA TTCTAGGTATACAAAATCTCTTCCTGTGTGCTGCTTAGGAGgcttacatt acattacattacattacattacattacattacattacattacattacatt acattacattacattacattacattacattacattacattacattactag ACAAAGACCTCAAATTACCATATCTTTTTTTTCCATAGGTAATTATCACT ATTTCTCAGCCCGTAAAGATTACTCCATATTCCGTCTTCTCAAGATGTTG TTTCGACTGAATTTCTTGGTGTTCTGTGTAATGGCTGTAACCGATCACAC TTTCGTTCGATATTACATCTGTGCCATGCATACTTATTGGTTTCTCTCTG TGTGGGTTTGTATGGTCGTTATGAATCGCTATAATAAGGTAATATCCATG TTATTATTTGTCAATCTGTAacataatacacgttttttataagaacctat gtaagaacatcaaaaaattttgaagccttcgaatgttcttattttgacca ttttgtgagtattttcgaccattttcccaagaaatagggtgtttttgagt ccacaaagccttaaaatcttccTAACttcttcttaacattttgggcagcg aagccttatgttcttatatagtttgttcttataaaaaacacgtgtatGTC ACAAACGCGATAAATATTCGGATATGaaatctgaaattttgaaaCCAGAT CCATCAGTAATGAAGATAAGCTTTAGAACAGGTTTCTTAAAATGACCTCT TTGGAAGCCAAATTTCAATACTAAGCAGTTATAAACTCTGCGAATAGAAG AATAGCCTTCTAGctgaaatgataaaaatgacCGACATCGATTCAACTTC GTCATATTTTGTCTGTCTCCAACCATCTCACTCAAATCATTCTCAGACCC GGTGGAAGCGGGGGAGACTAGGGAGGCTTTTTTCGCCTCCctacttttga gcaaatgagatttttgtCTGAAgttcctagcgaattttatctcattttta gccttcagcctccccacttttatggTTATTCCACCGGGCCTGCTTACTGa tacatttctttattttcaatttcagcaCGAAAGTTTCATTctgttgaagt ttttcatctACATCATTTGCAACTTTCTGGTTTTCAACGTCCCTGGCGTG TTCGAGAAGGTGTTCACGCCCTTCCACTGGGCGTTGAAAGACGACAAAGG AACTTTGGATTATTGGAAGAAACGATCAACGTAAGGAacgctttttttct tttctttgaaacaaGAAGCCCCTAGGGCGTTGGGGCCTAGCGAATCAAAA AAGTAGATATTGGAAGCTGTACGAAAACCTTTAGTAATCCCTTTGTAATA CCTACCACCCTTTGTAATCGACTCGatgcactttgtaatacctaacACAA GCTGTATTCGATTACACACTTGGGCGGAAGGAAGGAAAattgctaatgaa aggcccgatCGCCACGGCTGGGCCAATAAATGTCCgttatataaatataa aataaaaatccgTTGCAAATGTTGAATACTGAGTTCAAACACACTCCGTT TTTTCATGTGtcattttttacgtttttcttcTCTGTTCACGGCGCTCATG AACACTCAATTGAACCCTATATTCTGAAATCTCTAAGATCTTTCTTTTGA ATTTAGTTTCAATTCTTTAGACACAACATCAATTCTTTACTCtgatcttt aattttttttttccagataTGATCATTGGTCTACGATTGTCGGGATGTTT GTTGCTTTTAATTTCGATCGATACCAAAAATTCCTTCTCTACCTTGACAA GGATGATCCGAAAACCAAGAAAATGCGAGAGTTCATTCGGTATTTTATCA CGCTAACattatttgtttgcttgttgCTATGGATACATTACATCATGTGT AAACCCCGGgaagaatatttaaatttacACCCATGGTTGTCACCGATACC GATTTGTATTTATACATGGCTGCGAAATATGCATCCCGTATTACGGAACT AtcatttgaatttgtttacatggCTCGGGAAGATCACCTTGGAAACATAC CTTTCGCAAATTCATATCTATATGATTGACAGTGCGCAGAAGATTCTTGT GTATCTACCTCATTATCCAATGTTAAATTTCACGGTATCGACTTTACTTT ATATTGCCGTCTCCTATCAACTGTTTCATTTGACCGTGTTTTTCAGTAGT TATATGTTGCCACGCAACGGTGATGTTGTTGTTAAGAATATTATTCTCGG TACCGTATGGATGTCATTATGTTACACTTTGGCTtatttgctgactcagc aaagaATATGGAGCTCTACTCATAGCGGCTTGGAATTTCTTTTGTgggga atttaaaaaaagttattttttatattatttttggaTACAATATGATTTTC AGTCTGTTTTAGGAGtagaattttcatatttttgtacattttgtatTCCT TTTTATATCACGGACCTCAAATTTTTCGAATTAAACTCTGAACCCTGAAG AATTTGTAGTAGCTTCCTTACGATTTGTGAGGAGAGAATTTATGGGTATT TTTGTCCTatgtattatattttttaagaattggtttgttacatttgtgaa atctatcTAATTGTAATTCCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057632TCONS_00057632Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057632-proteinTCONS_00057632-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_295supercontigscaffold_295:2550..8222 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.54 1.75 0.44 0.28 1.79 1.35 3.44 3.52 1.96 2.14 2.09 1.9 3.89 3.17 2.88 6.48 4.2 4.17 0.6 0.59 2.85 3.15 2.84 2.48 1.97 2.92 1.6 1.2 0.5 0.88