XLOC_036455 (gene) - C. hemisphaerica

Overview


Name	XLOC_036455
Unique Name	XLOC_036455
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_299:85094..99079-

gene from alignment at scaffold_299:85094..99079-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_036455 ID=XLOC_036455|Name=XLOC_036455|organism=Clytia hemisphaerica|type=gene|length=13986bp|location=Sequence derived from alignment at scaffold_299:85094..99079- (Clytia hemisphaerica)
TAGCAATTAAGTCGTTGCATTTCTTAATTCCCATATCAACTTAGTACTAC
TTAAGCCTTAAACTTAAACTTTCAGGTCTGAACACGACCATTAAGATTAA
AATAGTGTATTGCGGAACAATTTCTCTATTGAGTTATGCTTGCTGCATAG
TTCTTGATTGTGTAAATATGAATAAAGGAAACCGACGACGGATGTTTAAG
AGTAAACAAACATTAAGCTTTAGATGCGTTTTTTATGGCAACTCCTACAC
GAAAACAAAAAATATGCACCAGGTATTGTTAAAACGAATTTCTAACATGA
CTGATATCACTGACCTTTATATACCCTGGACAAAGCTTCTCAATCCCAGC
CAAGCAAAATCTTTGATCGGAGTTTTTTTTGAAAATTGGTACCCTAATGT
CGGCACTACTCGATAGCGGTGTAAATGCATCGAGAGCGCTAGGTCTACTT
TTCCTCAAATTCTTTTGATGATGTAGCGGCGCTAGACGTTAATTTTTAGC
ATTGCAATGGCTTCTCCTTGGGTACCAATTCTAAAAAAACTCCAATCAAA
GATGGCAGGTATTGCTTGGTCCAGGGTTATATAAAGGTCAGTGACTGATA
TACGCTATTGCTGTTGCCCCCCCCTGCATGTTAAGTAGGCGATAATAAAA
GGAACAAAATCGTGAAAAAATATTTTCCAAAATGGCTGCCATTTTTTGAT
AACCTGATAGCAGCTGTGGAGTTTTCTTAACGCGACACGCTGAAGCTCTG
AAGATCGCTAAAAACTAACATCTGAGGAAAATGGCCCTATCTTTACAGAA
ATTTTGAGTCAACTTTTTGTCTCGTGCCGAAAACTTAAAAATTTAAATGG
CGCTCCATGAAAAGTGTATTTTATAGATAGGAATTAAAATTCTGTCCNNN
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TGTTTTCTCTTGTGTGACCAGTTTAAAGCAAAAAAAGATTCTTTTTTGAG
CATATTCATCCATAGAAGAACCTTGTTTGTGAAGTACAATAATGTTTTGG
ATGCTTCTTTTCCAAAAAAGTTCTGAATTTGCTTTGAGAGAACTTGCCAT
ATCTCCCTACCCAAAAGTTGTCGGCCATGACACCCTTCCCTGTCGACATT
GCACTCTGACCTGTTCCTCTTAAATAAAATTCTACGCGGTCCGCGAACAG
GCGACCGACCATATTCTTCAGATTGTATATTTTCACCCACGTCTTTAGAG
CTTTAGCGTACTGGGCCAGAAAATACACAATCTGTTATCAGGTTATTTTT
TGATGACTTCATCATATATGTGCAAAAATGTAATCTTTTGACGAAAAAAC
TGAATTTCTTAAAATTACAATCCCGAGTTATCTAAATGAGCTTTTTCTAT
TCTGTTTTGATTTTTTGAAAGCTAATACAGCCACCACCACCCCCCAGTTC
GAATAGGGTTAAATAGTGGTTTTGACAGGATAAGTCTACTAATACATAGC
ATATTACATAAAGAATCTTACTTAACAAACAGAACACACCTCGATTCGTA
TTAGATATAGTTAATCTCAAATATGTTGCATAAAACAGCTTACACTTCCA
TATATCTTTCAAACTAGCATTTTCTTACGTACACGTTTTTTTTTTATAAG
AACGTCAAAAATTTTCGAAGCGTACTTACCGACTTTCCTACGTATATTCA
CTACTAACAAAGTGACCTAATGAAATCTTTCCATCTTTTATTATCTTTCT
TCAAATTTTCCAAGTGCTTTTAGTAAAGTCACTTTTCCTTTTGACACCTG
TCGGGTTCCCTGAAGGTTTATGCTATGATTTTAGCCAAAAGTGTGTTAGG
GCCCCTTCACCTAGATTTAATCTGTGACCTCTGGGGGCTCTTGCGCAATA
AATTTGGATGTTCCAATCAACATTTAATGTGAAGAGGAAGAGGATAAAAA
AAAGCAACCCTTTTTAAAGGATTTTCTGCAGTTAATGTTTTGGTCACAAT
TAAAATTCTTAATGCCTCTGATGATTTAACAGGAATATTGAAAAATCAGG
GCGGAACTAATGATGACTTAAATTTTCCTGTTTACACTTTAATACAAATG
TGTACTGAAGCGGAACAAAGCTAGAACTAATGATGACTTAAATTTTCCTG
TTTCCGCTTTAATACAAATGTGTACTGAAGCGGAACAAAGCTAGAACTAA
TGATGATTAAATTAAATATCTACAAATGTACATGTTTACAGTAAACAACT
TCTCACATCAGACCACATAGAGCTCAGACCAAAAAATATAGAAAAAACGT
AAACAAAAAAAAAACATCTAAAACTATAAATGAGAAGAATGCACGTTCAC
AATAAAAGTATAATTGCTTTTAGCAATTATAATTTTATTGTAAGTGTGCG
ACTACGATACTCGTCTTTTGTATTTAATGACGGTTTTAATGCTTTAATGG
CTAAAGCTTCGAGAGTTAAGGGCTCTGTAACCCATTTTAAAACGAAAGTT
CGAATTTTGTTAAAATATATTTTGACAGATGATACTGTTACATCTAACTA
AGTGAGCTGTGAAATTCTTTTGAAAAAAAATCAGTTCTTCACCCTCACTG
CCGAAACAGAGTTGAGAAACACATCATTCTTTAATCAACAAAATGATTTG
TACGTGTAAGTGTAAATATTCACACGAAACATCGGCGTATTAAACAGAAT
TTCTGGAAAGGTTTATTGCTTTCAATCCCGGGGGGGGGGGNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGAGA
AACAGAAGACTTGAATCGTTATAATCAACAAGGGGTGTTCGAGAATTTCT
AATATTTTTAATTTTGTGTCTGGATACATCGAGATCCACTACTTTAGGCG
TACAAATTTTTGCGAGCAGAAACTTTCGCAATTTTCGTGAATTTTGCTCG
CGAAAAATTCTCAAAAAAATTGGAAATCTATAAAACCTCGTACTCGTAAT
AAATATAAAATTGTCCGCATATTTTTATCTTTTAATGCCTTTTTTAAGTC
GAAGAGCAACTGTCTTTATCGGATTTATCGAGAATTCTAATTTTATCCAA
CGATTCGAGTAAGTTTGTGCTCGAAAAAAATTTTCTTCCTCAAATTGCGA
AAGTAAATGTCGTAGATTTCACGATTTTTCGACCTCGCGAAAGTTTCTTT
GAACGTCTAAAATACATATTGTTACGAAGTTATATCTGTCACTTTTTATA
CAGGCCGATAGTGTTCGTATTGGTTTCGGAACGTTTTGGAGCATAAGAAC
GGATCAATTCCGTTCCGATGAAAATATTGGTGCGTAACTGTTTCGATCTG
TTTTGCTTTAAAACGTCTTCTCTTTTGACGTTTCGAATTTTGACATTCAC
ACTTGTTACTTTTCAGAACAATAAGGAACCGTAACGTCTGGTTCAAAAAG
AAAAAAAAACTTGTCAAGAAAGTTAACTGTAAGGAACCCGGGGGGGGGGG
GGCAAGGGGGGCTATGCCCCCCAATATTTTTTTCAAAAATGGTTATTTTG
CAAAATGCAAAGTTTTTCTTGTTTTTTTTCTTGAAAGCATTTTGTTTTGA
ATGCGTTTTCAAGCAATCTATTATTATTATACAGAATACGGTTTCAGGCC
CGTTCAGGTCCTCTCTAAACAGATCTTGTTTTACAAAATATCTTTTTTAA
ATATAGTCCTCCTTGAGGACTTCCTCGCACTCTCCATTTGTAATCGCTTT
GCGGCATTGCTCGATTTCTCTCGTTTGCTTTACTTCTCCATTCTTTTACT
TGGTCTCTTTCAATTTTTTTTCAACCTTTTTTGGTGCCCCTTCGGGCCTT
CCTTTCCCCCGGGGGGGGGGGGTACTTAGGCAAAATGGGTGCCGGGTATG
TGCGAGCCATATGGGTACCTTTTCTCATTCCTCAAAAGTCTCTCAAAGGG
GTACAAATTCAAAAGTAAGTCTCTGAAAGGGTCCCAAAATCACGAAAATC
AAAAATTTCTCTCTCAAAGGGTCACGATTTCCAAAAAATTTGAACAAAAT
TTGGTGACAATCAAACAAAAATTTGGAAAAAATGAACCAAAATTTAGGAA
AAAGTCTCTCAAAGGGTCCCAAAATCACCAAAATTTTGTCTCTCAAAGGG
TCGATTTTCGATTTTTGGCTCGGACATACCCGTCACCTCGCAAACCTAGT
ACCCCCCCCGGGACTTATCGTACTGCTTCCATTCTCTTAAGTTTCTCATA
AATTTGTATTTTACATGCCCGTCATTAAATACAACTTTGATTGGTCGTGT
ATGATTTGATTCTTCACCAATACGGGAGATCTATTGTGACAAAACCGACT
CTATTTTTAATTGTCCAAGCAGCTTCATTATAAAAAAGTAATCTATTAAA
TATATTTGACAGACTACTTATGGTCACCTCTATTAAAAGAAAACCACAAA
AACAACCTGAAAAAAATAAAATTTTTCCTGTTTTAGTAAGCTTGCACCGT
TTTGGAATGTTTTGGAATGTTAGACGTCAATGACTGATCCAAGATAGAGA
AGATAAATAAACTTTTTGGTACAACATAACAACTAGACATCAAATCAAGG
TCTTAACTAAAAATAACTTAAATAAACCTGTTGATATAATTAGGAAAGAC
AGTGACAAATTCTTTGGTCTTATGTAGTTTTCTTTTTGCGTCTAGAAAAG
TCTCCGACTGTGGTAAAAGTACATAAATTACCCTTAGCGACGCTGTAACA
CAGACAGGAAAAGTACACTGAAAAGTACTAAAGCAGAGGTTTTGCTTTTT
TTGGTAGAGGGCGAATGAAAAATTACTTTCATGCGAGATTCATCCTAGAT
TCTAGGCCGGCGAATTCTTATTTTAGAAAGTATAGTGTGTTGATTAGCGG
AAATTTGTTATCGTGAAAAGCATAGTTCGAAATCATATATCGACGCTGTG
CCGACGAATCGAGATTCTATTCAGCGCGCAATCAACGAAGACAAAAGTAA
CCATGATGATCATCCAAGATCTTGGATGAAGTTCAAAGTTGGTATTTTTA
TTACCGTCGTTGAAAGCACAACTTAAAAAAGTCATTTATAAAAAGAGTCA
GTGATTACTGTTATTATTACTGTTTAGTAATTACTGTTGTCACGAGTTTT
TGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGA
TCAGATTTGGCCGAAATTTTGCACACTTGATACTTGGGTGNNNNNNNNNN
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NNNNAGAACGAAATTAAGACTAATCTAAATACATAGGCAAGACATTTCAT
TCTGTGAAGGTATTTAATGTAACTGCACACAAAAGGCATGGTTTGCCCTC
GCGGTGTCATTAAACTTCAGCCCAATAAGGCCCAATAAGAAAATGCTTCC
TACGGCACTGTATTTAATGATAACTAGAAGCTGTCCAGNCCCAATAAGAA
AATGCTGCCTACGGCACTGTATTTAATGATAACTAGAAGCTGTCCAGATG
TTTCATGGATAATGAATTCAAACAAAAGTTTCCTAATGAGCTATTTTTCT
ATTTGACTTTGAAATTACCACTTAGTTAATGAACGATTGACATTGCTAAA
CTATTAATTGTGTTTAGAGGGTAAAGTGTCACACCCTAATAAAGCATTGT
GATTTTAACAAAGAACAACCCTGGGTCTTCATCTTTTGAAATGTATAAAA
GGGAAAGAATCGAGGCATTTAGTATCAGTTCAAAGCAGAAGCTGAAACGG
TTGAAGATTTAATTTCATACAAAGGAACGAAAAAGGTAGAATACATTATT
TATTTATGTTATACGAAATAATTTTATCATGCGTTAATAAAAGGTTTTAA
CTACACATTCACAATTCGTATAGCATATCTTTAAGGTATGTGTAAGGGCT
GCGGGAAGGGCTGTAAGGGCTGGAGAACAGTTTCCATGCTTATTCAAAAG
CTAACTGGGGAGCTCCGAAATAGTCCAGCCTTGATAGGGCTAATGCAATG
AATGCAATTTTATATTTTAGAAAAAGCAACAAAATGAAGATTGCTGTGTT
GTTAGTTTTGGCCATTGCTGTTGTATGCGAGGGACAGGAAGGGGATTTAT
TGATTTATGGAGTAAGTAAAACAAGCTTTATAATTTTTGAAAAGTAATGA
AATGAATGAAATTAAATTCTTACTTTAACCCTATTTCAATAAGAGGGGGG
GGGGGGGGGGAGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGAGGGGG
GGGGGGGGGGGAGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGCCCA
TTCCCCCCCCCCCCCCCTACCAAATTTTTGTTTATAACTTTTTATTGGCA
GGGCCCTGAAACGTTTTGAGTTTTCCTAAAATTTATTTTTTGGAAAATTT
CTAAAAAAAAATTTTGTGACGTGACTAGTCCTCGTGCTATTGTCAATCCA
TCAGCAGGTGGTATGACACAAATTTTGACAATAAAATTTCTTACATACAT
CAATCGAAAGATAATTTGATTGTGATTTCAAATATATAATTATTTTTCCT
GTCACGTGACATGTTCCCTTGTTATTGAGAAAATACTATNATCGAAAGAT
AATTTGATTGTGATTTCAAATATATAATTATTTTTCCTGTCACGTGACAT
GTCCCCTTGTTATTGAGAAAATACTATTGATGTCAAGAGATGCAGAATAT
GATAAGGTGCCATCATAACTAATTTTGATATAATAGCATTTACCAATAAA
AAGTTATGATGGGGGGGGGGCGAATCGACCCCCTAGTTTTGAGGAGCCCC
AAAAAGCCTAGTTGAAATAGGGTTAAAGTTAAAGCAGTTAAGTTCAGCTA
TGAAAAATCCAATTCAATACGTTTAAAGCAATGCAAAATATGTTTGTCAT
ACACCTTAAGTAATTCAAAGGTTTTTTAATCTTTTACATGGGTCTAAGAT
TGACATTCTGCCATAGATACTAAAATTTATTAGAACCTAGATATCACGTG
ATAAGTGGTGTTATCGGCGATCCAAAAAATGTCTGCAATCTGATTGGTTA
AAAAGAGTCCAATATATCTTGTATTTTACATGTAAAAATATAAATTGACG
AAAAGATGTTGTTGCATTGTAGCGGTAGCAGCAATCTAACGTCACTTTGC
TACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTTTTTGGGTCACCGATAAACCAGTTATCAGACC
TTCGCTCGTACAATATGGAAATATTTTACTCGTTCCAGATTTTCCGTATA
TTTTCCTCGCCTAAATGCTCGGAAAATATTGTACGGAAAAATCTCGGAAC
TCGTAAAATATTTCTCATATTGTACTCGCAACTGTCCGATAACTATTACT
TATTCCTGCAGGGAACAAAGCAATTCAAAAACTCAATTTGACCGTTCAAA
AAAGAATTTCTGAATTTGTTGTTACATTTTCATTATTTAGTGCCCAAGTG
GATATTCTTTAAAAGGGACGTATTCTGGCTCGACCACAGCTGTTGTATAT
ACAGCTGCCGTGAAATCTACTTGTTGTCCAGATAGTGCATCAGGTGAGAG
CATTTTTTTTTTCAACGGAAAAGGGGGAAGCGTTGCGCTATGATAGCTAT
CCGATATGAAACTCACAACGATAAATTCATTTGCAAGTGTGAACAGGAGC
CCTACTTGATGTATTTTTTGTTTCGTTAAGACATCCAGTATAATGTGAAC
ATAGTTTTAGATTTGTGTACGGGACGAAAATGAACTTGAAAATATTGACG
GGTGGGGCGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGGGGGGGGGTGTTACTATCTTTCTACAAAAATCAAGATTTATAAGATGA
TTTGTTTATGAACCTTATATTATTTGGTTGGGAATCGTCACGTTACTATT
TTATTCCTTTGATTGAATTTAAGTACAAAATCATCTCTCATAAAAATCTG
ATATCATTAACTGACCTCCTGAAAAGCTTGCCATAACGAACTTTACACGT
TCAAATCGATTATCTGTTTTAATGAGAAACATGTGTTAATTTGTTTTAAG
GGTGTGACAAGCATGTGCGAGTAAGGAAAAATAGACATATCTTAGCAATC
AAACCTATAGAATTATAAAATTAAATGGTGTATTAAATTAAATATTAAAA
TATTTTTACTTTTAAAATAATTCTGCTGCTACATTAGTATCCTTTCATTC
ATACTACTAATCCTTTTCATAGACTTTCATGATCTGGGAAGCGGAAGAAT
CTTTTGTTGCCCCAGTGGATCAGGTGCTTATTGTTTAGGTAAGTATGCTA
TAAATATATTCTCCATGTATATGTTTTATCCTTGACTCTGTTTACCTGGG
CTTCTTTATGTACGTTAAATACAACTTTTATACTTCATACAATTATATTA
TAACCTCATCACAGAAAGGTTCATTTTCTAATTGCTGCCATCACTATTTA
GCAAAACTACGCGTCTTATTTTTAAAGTCTTATCTAGCTTTTAAAACCAT
TGCCGTATATAAAGTTTTAAAGGAAATAGTTTGCACGTTACAAAATTTGA
CAATTGTTTGCAAAATCAGATAATATTTCTACTGACATCAACACTTTATA
AGCACCTTTTAGCCAAAATCTCATAAATGATACCTGACATTATGACGCTA
GATAGGGACTGAATTTCCAAATGTATTTCTCTTCTCTTTTCAACCACTGG
TATAAACTGATTCCATCGTTGAAATATCCTTGACCTGTTATTTATAGAAT
AATAAATTTGATTGTAAATTGATCATACATGATCTGGAAACCATATCAAG
TGAGGGAATGTAACATCATGTGATACGATATTAACGAAATGTTATTTAAA
TCATTGCCTTTAACTTGTTTTGTTCTTTATAGGTACTCAATGTAATTGCA
AAAATGGTGGAGCAATAAGAGCTGGCAAACAACCTCAAGCCAAACGTGTC
CCCTCCGCTCGTAAAGATACAATGGAGAGGGAGTTGAGAATCGAGAAAAT
TGAGAAGGCATTATCCCTCTAAACTTCCTTTTAGAACTTTGAACTTTCAA
AATATGATAACTACGAAACAGTTATTAAAGAAACATACCGTATAAAATCT
AATTGAATATGACCAGGCACTTTACATAATCTAAGCACAGGAAAAGCTTC
TTTATGTGTACTTTCCATATATGGGATATGAAACTATTTAATTTTTTTTT
TAATTAATACTTTTGTAAACAACTTAATGTGAATGTGTACGTTATGGGGC
GAGAGGCTGACTTGAAAATACTGACTTACAAAAACTATTGTTTACGGAAA
CTGTGGACTAACGTGGTCCCCTGAAAACAGCTGAAATATCTCGTCTTATA
ACATTACTTCATTTACTGTAATACTGATACTGAATAATTTTCATATTTTG
CATTTATAAACAATTTACTCATGTTTTCATTCACCTTCGTCCCATGTGTT
ATCGATGCGATTACATCGATTTTCTTATGAGAATTATTCAAACTATTCGA
AGCTTTTTAGTTTGTTCAGTGAAAATTCTAACAAAAAGTAGTTATCTATA
CACGCGGTCGTCTACTGTGAACGGGAGTCTTTTTTCAGGCTTTTTGAAAC
CAAGTTTAACTCTCAAGTTCATTCAATATGTATATATAAACTAGCTGCTA
TCGCAACGTCACTGGCTGCGATTAGTTTTTTTAAATCTGAAGGGCACTCT
TCGGACTTGAATGGGGTCGCATGCACATCAAATGTCTTTTGCTAGTCACA
TTTAAGTAGCATCAAAATTCTAGATGTAGCATGGCGGCCTAATAGATATT
GAAAAGCTGAGTTTTGCCTTAGTTTAAAATCTTAAATAACCTGTGCCCTT
TGCTCTTGCACAGAGTTGCGCGTACCGTGGCTGATT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00057832	TCONS_00057832	Clytia hemisphaerica	transcript
TCONS_00057831	TCONS_00057831	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00057832-protein	TCONS_00057832-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_299	supercontig	scaffold_299:85094..99079 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.33	3.34	2.16	2.77	0.44	0.47	0.47	0.93	0.56	0.73	0.67	0.38	54.41	53.9	151.42	222.55	10.82	25.2	691.51	409.55	0.32	0.09	3.58	2.32	0.95	1.02	0.94	0.51	1.13	1.4

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XLOC_036455 (gene) - C. hemisphaerica