XLOC_036471 (gene) - C. hemisphaerica

Overview
NameXLOC_036471
Unique NameXLOC_036471
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_3:104305..109985-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036471 ID=XLOC_036471|Name=XLOC_036471|organism=Clytia hemisphaerica|type=gene|length=5681bp|location=Sequence derived from alignment at scaffold_3:104305..109985- (Clytia hemisphaerica)
AAAAAATAAGAAACAACTATTCGAATATTGGTTACAGTTGCCATGGGAAC GCAGTATTTTAACCAATGAGAATTTGTTAAAGCTTCACAAGACAATGAGT GAAAATGAGGATAAGAAGATAACAACGAAAAATTCATCACCAACCACCAA AACTACTCCACCTCCGAAACAGTTGAATAACCCAAAAGGACCACCATATA GTCACCCTGTTTATAAAAAGATAGCTGCAGCAAATGGTAGAATCAATCGA ATGTCCAAAAGCCAAGTGGTTGATGCATTGGAATATTTGAAACTAAACCC AAAGTAAGATTAAATCATTTTTAATTGTGAATACGTCCGAAGTGAAATTT CACTTGTTTTTCATGCGTGAAAAGTAAGTAGAAATGTATTAAGTGGAACT AATAGCTGAAGTGGCTCACTGTCTTGTGGCCCTTAGTGGAAACAATTCCT CAGTTGTCTAAAAACTGTTGAATTTTTCGAAGCATGTCACGTAAAATATG TGTAATGTTATTATTATATATAATTATTTTTACTGTACTTATGTACCTTT CTCTGAATAGTGGAAGGGGATATAGTCTAGGTGCTCGGGTACTCGTAATG CGGCAACGCGTAGGGGGAGATTCGTTCGCTAGGTAAGCGTGTCTACTATT TTACCCATAGGGGAAGTCTTGAAGTGTTACAAAAGCGTTTGAAGAGCCAC ACAAAGAAGCAGCATTTCCTAGAAAACGATTTCACAGAAGAAGAGAAAAA GTACACGGATTTTTACATTGTGATCGACTTTGAAGCCACGTGTGAAAAAG AAAATCCCAAGGGTTATCAACATGAGATCATAGAATTCCCTGCTGTACTC GTAGATGCAGATACTCTGGAAGTGGTAAAACTTTAAATAATTACTTTTTT TGGTATTTTCATATATTCTTTGTAGGGGCTAAGTTACATCCGCGTATAGT CATTTGATCTTTACACCTTTGATAGTCAGAAAATGTGTGTGCTGTGGTAT AAATTAGGTCTAATGTTCTATAATGATGGCGATCATTTTTTGGTTTGATT CCAAATTTTTCTTTCGTCATATAAATATAGGTTCCCAGGTTCTGCTTTAA GTAAGAAAAGATTTTCCGACCATGCTTGTTATAAACTAGCCTATTCGACA TCCATCCCAATTTGCGACCTTTCGGGCTCCAAACATCCAAATGAATTTGC GTCAAAACAAAAGGTTCCTTTATTTTCGAAAATCATCAAAGTGTAACTCG TCAAGAAACAACATAATTTTTTCCGTTATTTGTTTTTTGATAAGACAGCC GCTTATTAACCTAACAGATTGATCAGAGCCAATTACACTGTATGTAATGT TAATTATTGTTAAGTCTTGGTTGAAGAATGGGCCATTCCATTTTATATCC AAGCAGGGGGGGTGGACGAACGTTTCCAGGGGATATAAAAAGTATGTTTT CATTTTTCCAGGGGATAAAAGGTTACTTCAACATTTCCAGGGGGCAAAAG ACTGATTTTAGTTCGTCCACACTCACTTTTAAGATATGAAAACAATTTTT CCAAGGGTTCTTTTTCAAATTTTGACATTCTCCAGGGGGTATTCACATAT TTCTTAAAATCTTTCTTTGCCTTGTAAAGGTTCGTCTACCGGGGGTATGG AAATTTTATGAAACAGCCTAATATTTGACGTTCATGATCTCATCTTATCG TTTTAGGTATCAGAATTTCACAGTTATTGTCGACCGCTAACCAATCCGAT TTTGTCAAAATTTTGCAGAGATTTGACTGGTATAACGCAGGTAGCATATG AAAGAATTGATTTATCATGGCTTGGCAGCAGGTTTTAGGTGCCCCCTAAG AATTGAGCTGACCCCTAAGATTTAGGTAACCCCTGGTTGCCAAATATTTT AAGTGACCCCTAAGCCAAACACACGTCAAATTTTTTCGAAAATCCTTTTC AAACAATCAAACAAATACAACAGTAAGTTTAGCTTATTGCTAAAAAGAAT AAATGCCCTAAGAAATAGGAGATAAGCTAAGTAAATGCAAAAGGATTAAA GAATTTTTACAGATGATATATTAGATACCAAATCTTCAGTCTTTTCAATC TAGCCCCCAGGTCCATCTGAAAATATTTAGATGACCCCTAACATGGTTGG TCCCCCCTAGCCACAGGCTAAAATCAGGTACCAATTGCTTGCCAGCCATA TTTATTTATGAATGTTTTTCTCGAAACTGCTATTGGACATCCAAAGAACT AAAGATATTTTGAAGCTTGTTGTTATCAATCCTACTGTTGCCGTTATTCT TTATTTCAGATAAGGCGAGACCAATTTGATTAGTTGGTTTACGTGCCCGA CCTACCCTAAAATTACAAAAATAAAAATAAAAATAAAATTGATTTTGATA GTACATTTTTTTTAATTGCCTTACAGTCTGCAAAATTTTCAAAATGTGGG TAATTTTTACGAAGCTTTTATGAATTTTATGTTCAATTTTCATTGTATCT GTGAATTCGAGCATTTTGTGTCCTTTTATTTTCTGTTTCACATTTTTGTC ATGATGTAGTAGTTTTTGCTGTGACGAATGCGGTTTTTTAGGAGATTTTA TAGGTGAAATGCTAGTTTCATTTTTATTTTTTTCGCCGACCGACCCACCC TCTTTTTTTGGGTAGCTTGGTCCGTAAAACAATAAATTAAATTGGCCTCG AGTCTAGAGCACAGATATCTAAGCCCGAAGGGCTAGATTTGCAACTTTAA GCTTTCTCCAGCAAAAAAAAGTGAAGCAAAAATTTGACTTTTTATTTCGT GCCGATGGATAGGATCTAGCATTTTAATTGTTTTCGGAGCGCGAGATCAA AAAACGTAGGCGGCAAACGCTATTTCACATCTCTCAAACCGGTNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTAGTCACGTGACTCTGGT AGGAAATCCTTCCAAAGATGAGCTTCACTTTTTGATAAAAGCCGCAAATC TAGCCCTTCGGGCTTTACAGATATCTGTGGTCTAGAGGCCATTTCAACGT TTTTTTTATAAGCATGGGTAAAGATATGCTTATATGCCATGCTTATGCAA TGAGGCAAATGATTGCATTCAAAAATAGAACCCCAAAAAGTGAGGCTTTC AATCACAGCCACTTTTTAGCCCACAGCGTTGACATTCTTGTGGCTGCTGT GTAGTACAAAATTCCATAAAATAAGGAAATTGATGAGCTTTCCAAAAATG TGGCTCCCTTTGAAGTTGAGTGATTCAGTCTTGAAATATAAGATGGCAAA GTGAGGGCAAGTTTTGTGGCTGTATGTCACTGTGGCTCACTCAACGGGTT GGCTTATATGTGCTGTCCTGCTTTAAGACTTCAATATTTTTTAACCGTTT TTCTTTAAATTGATAGTTTAAGGTCTTAGATACTAATGGGTTTAATTTGT GGCTGCAGGGTTTTCAATGGACTTGAAATGTGGCTTCAATCAAAGCATAT ATGAAAAAATCGTCAACTTTGAGCCGCAATTCTAGCCCAATGACCCAATA ATTTTGGTTCCATTTTTTATATTTTATGGATAAACCCTTTTGCTACGAGT TTCATCTGAAAAAAATGATTTTTACTCATTGAACAAATTTTTGGCTGCTG TTTTATCAACATAGTGTTTTTCTTGATTTGTGCCGCAATTTTGGCCCATT TTACAAAAAGAAATTTTCAACCTATCACCTTTAGAACCAATATTGTGAAG TTTCATTTGAAAAGAGTTAATTTTAAAAAGGATATTCAAATTTCTTTTTT TTGGCTGTTTTTGAAAACCTCACACAATTTTTGAATGCCATCAAATATTT TTTGGCTTTAGCCTCGATTTACACATTCAGCTGGATTTCGTAAACTAAGG CTCAGCATATGTTTTGTCAATGCTTAAGATTTTTTCAAGATTTGAGATTA GATGTGCTTATACTGTAAGTGTTATGCTTCTAAAAAAAAAAACGTGTAAA GGCCGTGGCTGAATGCATCATCGTAATTCGTTGTTTTCTTCTTCACAGTT GACCGTTGAATCTTCATCGACATTTGAGACAGTGCTCAATCGTTTTGATA AATGGCTAAAAGATCAAGTCACGCCTGACCAGAAGTTTGTTATCGTCACT GATGGGTAGGTTCCAAAAAATCCTTCATAAATAGCTACCGAAAGAAAGGA ATGATGCAAAGGATTATTCAACTGTTTTTGTTGTTGTTTTTACCGTCGTC ATTTTTGGCATCATTCGTTTTGTTGAGAAGAAAAATAAAGTTTGTGGTTT TTTGAAACGTTTTCATTTAAAGACGGATCATTTTTGTCAGAAAGTTTTTT TTGGTATGTTAGTAGGGGGAAATTTGTTTGTTTTTTTTAGGTTGCTCGAT TTTTTTCGTCAAAGCACTTGTTATACATTTTTGGAAAGCTAAGGGGTAGG GGATCAAAATAACTTAGGTGCCAATTTTTTTTCTGACACTTTGGTGTGAT TTTCGGACAAATATGACGGTCTCAGGCAAAAATTATAGAGTCAAAAATTA ATGAAAAATTTTAGCTTGAGAAAATAGAGACTTGTTGTATATTTTTGAAA AGCTCTCGAAAAATTAAGATTAGAGATATATTGCAAGTATAGGTGATTTC TGTATTTAACTCGAGATATTAACCCTTAAAACAGTGTTTTTCAGCCAGAA ACAGCTTTTGTGTCCAGTTTTTGCGCTTTAAGAAGCTCAATATCTCAATA AAGCGGTTGAATGTGACGTATTGACTGATTTTCCGGTTTTTCAACCAATC AGCTATTGGGTCCGTGATGTAATGTCAGAAGACACTGGAATGATGCATAT CATAAATAAGGTGTTATTCTCCTTTTTCAGACCTTGGGATATCGATCGTT TCCTAAAGACGCAATGCAAAATGTCAAAGATGGAGATACCGCACTACTTT CAGCGCTGGGTAAATGTTCGTAAGCATTTCAATAACTTTTATAAAATACA TCAAGTGAACGTCGAACAAATGTTACAATGCTTAGGAACGGAATTCGTCG GTCGACAGCATAGTGGTATAGACGATTCACGAAATATAGCTCGTATTATG ATCGAATTGATAAAAGATGGTTGTCAGGTCATTATTAACGAAACGTTCAG GTAGCTTCGATGGCTTCTAGGTTGGAATCTGTTCAGTTTAGGTCTATGGC CGAAGATGTCCATATGGAATTTGGGAGGATTTTGAATTTATTTATGATGT TTTTGGAATGTTCCATTCATATTCACAAGGTTCCGCGGAAAGCCTTGACA TTTATTTTGAAGTTGAACATTAATTGGCGGAGAAAAAATCAACAGATAGA GGGGTTCCACGAACATGTTTTTGATGAAAAGTCAAATTTTAAGCATCAAA TTTTAAGCATCAAATTATTTTTTTAGTGAATAAAAGTTTTTCCTCAAAAT TGAAAGAATATGCACTGTACTCTAAAGAATTACTAATGCTTGTTGATCAA TTGCCACTTCGAAACTGTTTTTCCCAGAATTGTCGACAAGATTTTGCGGC CACAAAACAGCATGTTGAAGTTAACCTCCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057852TCONS_00057852Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057852-proteinTCONS_00057852-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:104305..109985 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ERI13'-5' exoribonuclease 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
71.9 67.66 124.63 139.65 22.65 16.98 25.92 25.02 26.11 23.27 18.96 18.43 17.46 17.72 21.02 20.79 30.49 27.84 11.28 16.21 18.09 16.4 47.56 40.13 44.44 43.4 17.07 15.27 28.09 32