XLOC_036506 (gene) - C. hemisphaerica

Overview
NameXLOC_036506
Unique NameXLOC_036506
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_301:88104..93005+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036506 ID=XLOC_036506|Name=XLOC_036506|organism=Clytia hemisphaerica|type=gene|length=4902bp|location=Sequence derived from alignment at scaffold_301:88104..93005+ (Clytia hemisphaerica)
GCAAAACGGACAAAGAAATGCCcgcacggcaattggcggctacagtCAAA ATGGTGTACTGTATTTTGTTCATCTTTACATTTAATCATTATTCTTTTAT GACGGAACGAAATATCAATTCAATTCTTTTCCTTtcaaagaaagttaaaa aaaaaaacaacgaaacaaaataaaaaatatgtcaTCATGGTTACCTATAC CGTTCCGCGTTGTCATACTGGGCGGAGGATTATCTGGTCTGGCGGCCGCC CACACTGTTCTCAAACATGCTCAAGTACCGACGCAAGTGACCGTTATTGA GTCACAAAATCGGTTTGGAGGCTGGTTAGAAAGCACAAGATTCAATGATG GTACAGTATTTGAACATGGGCCAAGAAGTGGACGTTCTTATGGGAATGTG GCTTTGGATGCTCTGTCTCTGGTGAGTTTTACCACAATTTTCTGATCCTG TTAGCCTAATCTCCGAGCTATGTTATGAGGTTGCAGTTAtcaacaaaaat acaaaattcaaTATACAAACAAGTATACTAAATAGGTTTTAatatagacg atgctatcgttcgtttagagggtcagtaaacgcgaGAAAATATATGCGCA Gagtcagggcgtcagggcggtatagttttggaacactgtaaacacctccg cccCGAACTAaactcgttttcaaatttatcccgcttCCTAAAATTCCCTT TTTCAATGATAGACGGTAGGATCGTCTAGTTTTAATatagataaataaat aaataaatatttcattcaAATGTCTAAATCATTAGAGATAAGGCAAAGCC AACTGTGTCATCATCAACAGTTTTAATATCACCTCGGAAACCTATCGTTT GGCAAGTTAAAACATGCTGAGGGGTTTGTATTTCGCCACACATACAGTTG GGATTATTGCTCAGACCTATCCGATGCATAAAACTACcatatcaaaattc aataaGTTGTATCGAAGGAGTCATTATTATGAAGTTTCCATATCTTGAAC ATTGTATAGGGAAAGCTCATCTTTCGTGTAGCGTTTTGTTGTGTTTACTT TCATTTTGTTctcgttttgtttttttatacaaTTTATTTTAAGTCTTTTC CATATTTTCAGCTCTCGGATATCGGCATTGACGACAAATTTATCGGTGTA CCGAAAAGTAACGACGCCGCTTCACGAAGATATATCTATTACAATGGACA AATCTTAGAATTACCCAGAGGACTGGCACTAGCTAAAAAGTGGGGTCCAC TCCCTAAGTCTTTACTCGGTTTGATGATACGTGAACCTTTTGTGAAGAAA TCTGATTTGGATGATATGTCGGTCCATGAATTCTTTAGAAGAAGATTCAA CTGCGAAGAGGTTTGTAGTTCCAAAAGGATAAATATTTCATTGGGGCCcc atttcatatttttgaaaatttactttATCCCCCCCCCTGATAGAAAAAGT ATCAGGTATAAAAAATTTCACTAGAGTCCAGAGGTACCTGGGCAGAAAAG GGGCACTTGGGGCACAGCGGTACTTAGTTGTACCAGTGGTACTTAGTTGT TGTACCAGTGGTACTTATAGTTGTACCACTGTTGGGGGGGGGGTAAGTGT AACTTTTAATGTTCATTTTTCAATCTAAGTGGTATAAACACTCATGTTAT TCCCCAGCCCTCTTAGAACTCAAAAGAAATAATATGATACTTTGTATTCC TTACAGATCGCCGACTATCTTGCCGACCCATTATGTCACGGTATTTTCGG ATGGGACTCTAAACAGTTGAGTTTGCGATCATGCTTTCCAATGCTGTTTG ATTACGAGAAAAATTATGGATCGGTCGTTAAAGGTGCTCTTTTGTCCAAG GGTAAGTTTTCATTTATTCATAATATTCATGAGGTAATGTTCTCTACGGA AAAACCTCGCGTTTTAGCCAGTaatggcaaatttaaactaggcaaaagtt gtataaaatttgccattactggctaaaaccggggtctttccgtagaaaat attacgtcatcAATATCATGAATTTGAAGCATCAAGCGTGGTAGAAAATA TGTACGGTTAGgtcaaggatttattatagagactctggataaacatttta ctttttattaatttcattttaaaaaagttctctagctctttctttttgta cctTTGCAGGGAAAAAGTTTGATAGTACGGCTAGAATTGCTGATTGCATT TGTGAAATCTGGCGTGAGAGAAATATCCTTAGACAAGAAAAATCCGAATG CTTATAGAgtaacgaaattttcaattgggaatatctttccaaaactgtTG CCAGAAGAGCTAAAAGTAACATACTTTAGACTTGGGTGTCTTAGCTCCAC TGTGATGTGAAAATCTTTCGGAGGCACGTGCTGGCAAAGTGGTTTTTTAA GGTTGAAGATTAAAACTTTCCGGTTTCAACATttaatttcttatacataa caCGTCTTTTGTATCTTTCTCACAAATTAAAACGCCATAACGACATATAA TTGGCAATTAGatagaatctgactctcacaggaaagtctCCTTTGGGagt tggatgagtgattttcgataaaatatgcaattaaaatgtttcgaaaaatc atttaatgagggaaggagagtgaacaattaTATCATTACTGTGGATATAG CTAGAACttgagaaatcagcaaaaatcaggtACTTGTATCATGAAATGTC ATGAAGGTAATACAGATATATTTCTTATTACCTCTATGCTTATCCAGTAT ATAATAATTCCTTGGTTAGGTCACGACTTGGTGTTTGTTGAGAAAGAATC GTTCCCTTTAAGACAATAGGGACCTTTAGCATCTAGGACGGCAGATTTAT AGATTGTGCGCATATCTGGATGAGTTTTTGATTTAACAAAATATCCGAAA GATACTTGCAGTGTAATAAAAAccttaatcgcacgatgggttattttttc ttatttggcacgccctcaaagagagcaattaatcgttgattgcatcctgt agagagtaattaatcgttaatcacactcttcaatgctgcgccaatgttta caaaaatgattttaatgttttttcttacatttctaatgcatcgaacgttt taacNTTTGGATATTTAGTGCCGTCTAAAGAAAAACTGGATATTTTAGGA GTGACTTTCGATTCGCATATCTTTCCAGAGCATGCGTTAGAAAATAGTTC AACTGTGACGGTCATGGCTGGTGGGCCTCGTTTCCATGAACTTTTTGGTG AAAAGGCAGACGAAAATACGGCGACGGAAATAGCCGTTCGTTCTGTTCGC GATACgttgaatttcaaaagtgaGCCAATCAAAAATGTGACAAAAATGCA TCGACACTGTATACCGCAATACCATGTCGGTCATTacaaaacagctgaaa atatccAGAACTATTTATTGGAACANtgaattttcctcgtcctttcggac tcggaaaattaataacaaaaaaatcactcgtgcaattatattcgaattgc actcgttatcatgtgattacatatactaatgaTACTATTTGacacaaaat ccaaaaaattatctaagcaacattttttttttgcttctcaattttgaatt ttaattcttcGTTAAAgtcaaacttattttttttcatttgacagGTAACA AGCCACCAATTAGTTCATTGTCAAATAAAGCCAAAGAACAACAATGGATG GCATGGTCGGTCAAAGGAGGCATGCAAACGTTGCCAGAATTATGGTCACA ACATTTGATTGAGAAAGGCCTGCAATGTCATCTTAATACAGAGTGCAAGA AACTAAAGATTCAATTCACTACGGATAGTCGTAAAATTCATATCGAGACA AACAATGGAACATTCGAGGCTGATCACGTGATCTCTACGCTTTCGGCTCC CGTACTTTTAGACATGATCGAAGATCAAACATTACGTCACCTGCTACAAG ATATTCGGTATACTAATATGGCGGTCATGACTTTACAATATAGCGGAGAA AAAATTCCGCATAGTGGGTTTGGATATTTAGTGCCGTCTAAAGAAAAACT GGATATTTTAGGAGTGACTTTCGATTCGCATATCTTTCCAGAGCATGCGT TAGAAAATAGTTCAACTGTGACGGTCATGGCTGGTGGGCCTCGTTTCCAT GAACTTTTTGGTGAAAAGGCAGACGAAAATACGGCGACGGAAATAGCCGT TCGTTCTGTTCGCGATACgttgaatttcaaaagtgaGCCAATCAAAAATG TGACAAAAATGCATCGTAACTGTATACCGCAATACCATGTCGGTCATTac aaaacagctgaaaatatccGGAACTATTTATTGGAACAAAACTTACCGCT AAGCATCATGGGTAACATGTGGGGAGGTCCGGGCGTGAATGACGTCATCG TGAATGCAAGAAATAACACGATGACGTGGTTGACCAATAATCATCTTTGC TGAAAATTTATTTGTAgggatttaattttaatttacgcTGAATCTTTTGC CTTTTTTGTGTCTACATATGTTCgaatattttaaagattttctttttaca taagtggttccgttttatatcagacacatatttcatatcaggacagtgtc ttgctaattgttatattatgctgatatattattattattattattattaa aaNGAGGCATGCAAACGTTGCCAGAATTATGGTCACAACATTTGATTGAG AAAGGCCTGCAATGTCATCTTAATACAGAGTGCAAGAAACTAAAGGTTGA ATTCACTACGGATAGTCGTAAATTTCATATCGAGACAAACAATGGAACAT TCGAGGCTGACNCGAATTTCTTTGGATGGCTTTTCCAtgcttctttcaac ttttctttgaaGCCTTTTATGGAAACAGCAGCTACCACCTCAGACGGCAA TT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057897TCONS_00057897Clytia hemisphaericatranscript
TCONS_00057898TCONS_00057898Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057898-proteinTCONS_00057898-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_301supercontigscaffold_301:88104..93005 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.47 26.01 12.66 12.23 1.82 1.58 4.85 4.58 6.58 7.17 7.42 5.2 6.84 8.06 10.48 12.94 12.91 14.69 5.82 5.99 8.51 8.07 21.16 18.44 8.53 9.1 6.48 5.02 13.31 13.41