XLOC_036580 (gene) - C. hemisphaerica

Overview
NameXLOC_036580
Unique NameXLOC_036580
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_304:183226..192862-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036580 ID=XLOC_036580|Name=XLOC_036580|organism=Clytia hemisphaerica|type=gene|length=9637bp|location=Sequence derived from alignment at scaffold_304:183226..192862- (Clytia hemisphaerica)
TCAAAATCTAACGCAACCAAAACTGTTTGGTTTCTCAGAAAAAGAAGCCG AGAGTTTTCCAAGTAGAATTAGTGAAATTATCATACCTTTTACTGGAGAA TGTGACTCAACGAAATTAAGCAAATATACAGGAAAGCTGATCGAAGTGTC AGATATTTTGAAAAAGAACACATGTAATGGTCAGCATCCAACCATACCAG CAAGGACAATAGCGAGGCGTGAAGCAGTCATGAGCTCACCCATTCAGAAT GCAGATGGTAGCGTTACAACGGTGAGGAATTGTTTCATCAAGGGTACATT GACAAGGAACAACAATTTGAGATTGTGCAGTGAATGTCAAGCAGTGACTC GATTACCTGATAATGTGTAAGTTAATTTCTTTGGTGTTTTTAGTAGCTGA TGAGGATGATATGGGTCCTACTCCTTACGAAGTAGGAATTCCTTCTTTTT CATATTGGGACGCTTAGCGCTGTCCAGACATCACTGGTTCTGTGCACGCG AGACACGGATACCATGATGCATGGTGGTGACACTGGTGTTTTTATTAGCT AATGAGATTAAATTCATCTATGACAAGTTTTCAGTGTTGCAATTCTCCAT CTAAAAAGACTTACAAATACTTGATTAGATTTTTCGGAGAACTAAAAGTT TATAGAGTGGACTCTTCAAAACTTTTTTCAAACCAATTTTTCGAATGTCT GCTTGATTACAAAATTCCATAACTCGAACAAATTTTTGTTCTCCGTACCT GTTCGAGTTATAGAGGCTCCATTGTATAAGCCAGTGAGATATATGTCCCT CGCATCAATGGCTAATCTGAGGGGGTTACAATATTTATGACAGAGAGACT TAATTTGCTTATAAGGACTTTGTCTAAAACACTCTCGGTATAACTGTAAC ATAGGTAATTGACCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGC ATTGTGGGATTGTTTCGATTGTATTACAATAGAAATCTCTTAGGAATTCC TCGAGGGAATTCTATTGTAATACACTCGAAACAATCCCACAATGCATCGC TTTTTTAGAAAAATCAAAAACTCCGAGAAGGTCTATTGTGAGCTATGGTG ATACATATAATGCCCAGAGGCTGTGTTCCATTTGTCGAACATTTGTTCCT ATATTTTGAGACAGGGGTATTCATTTTGAAAATTTGAGCTCTACATTGCT TGAAAATGCACTAAATTGTGACAATTATGACAAATTAAAAAAGAAAAACT TTGCATTTTGCAAAATAACCATTTTTGAAAAAATTATTGGGGGGTGGNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCATTATC GAGGACGGTAAAAGTGCTGATTTACCGTCGTCCTCAGCTGGTTTGGATAT AGTCAAATTAGAACCTTACCATCTCCGTCACTGAAAAACACACATATATA AACTCGGCAATTTCATAATTGGAACACTTACGGGGATCACACATTTGTTC GAGTTATATAGTAAGGTTTATAAGGTATTGTTAATTGAATAAACCATAAA ATTTGTTCGAGTTAAGGAGATTTCGAGTTGTAGAAGTACGAGTTAAAGAA ATATTTTCGAAATCACAATATTTCAAAGTATTTAGAGAAGATACATTTTA AAACGTAAATTTGTGGTTGGCGGCGAATCAGGAAATGTTTAGTGTACGTG TTTGGTTAAATACAAGACAGACAATATATTTGACAACCATTAAATTAATA CAAAGCCATAAATAAGTATCCTCTCAAATATTTAGAAATGATGGGGCTTA AATACCACCGAAAGTTAATTGTTTGGCGTAGGCTGTGATTGGCAGCCGCT CAATTTCTTCCAAATTAAGTTACGTTTTACGTGACTGTAGGCGCTTACTG TCGCAGTGATGTCTCTTTAACTCGTACTTCTACAACTCGATTGTCCACTT AACTCGAACAAGTTTTAAGGTTCCTTCAGTTAACAATACCTTATAAACCT TACTATACAACTCGAAATCTCCATTACTCGAACAAATTCTATGGTTCCTT CAATTAACAATACCTTATAAACCTTACTATGTATCTCGAAATCTCCTTAA CTCGAACAAGTTTTATGGTCCCTTCAGTTAACAATGTCTTATAAACCTTA CTACATATCTCGAAATCTCCTTAACTCGAACAAATTTTATGGTTCCTTCA ATTAACAATACCTTATAAACCTTTCTATATAACTCAAACAAATGTGTGAT CCCCGTAAGTGTTCCAATTATGAAATTGCCGAGTTTATGTATGTGGGTTT TTCAGCGATGGAGATGGTAAGGTTCTAATTTGACTTACCGTCCTCGATAA TGCGGGTCAGAAGTGCAGGTTATTCTAAATCGCTTCAGTCACTTTACCGT CCTCAAAGGTGCAAATACATAAACTCGCTATTATTGGCCTTGCTGTAGAT GGGGAACTCTTTTTGACATTCGAATACATTGGAGTTTTCGAACACGCACG GTAAACTCGAATTTTGTTCGATGAATTACCGAGTTATGGAGATTGATTTG CAAGGAATAGACGATATCGGCTTTCCGAATTCTCCCCGAATGATTACCAA TGATATGCATTGCGCGGAAAGTCAACATCGTCCGTGAATCTTTTTGCGCA ATGCGTCATGGGTAATCATTCGGGGAGAATTCGGAAAGCCGATATCGTCT ATTATTGTTATTTGAAGGAACCAGAAAAGTTGGTCGAATTAAGATTCGAG TTATAGAGGTTCAGGTTCTGAAAATTCTATTGTATTTACAGCGGAAAAGT TTGATGCTGGTGGCGAATCAGGAAATGTTTAGTTTACGTGTTTGGTTAAA TACAAGACAGACAATATATTTGACAACCATTCTATTAATACAAAGCCATA AATATAAGTATCCTCTCAAATATTTGAAAATAATGGAACACAAATACCGC CGAAAGTTAATGGTTTGGCGTAGGCTGTAATTGGCAGCCGCTCATTCTTT TCCTTTTCTTCCAAATTAAGTGACGTTTTACGTGACTGCAGGCGCTTGTT GCTGCAATAGAGTCTCATTAAGGGTTCTGGCCATAATCGAAAGATCCGTT ACGAGGTTTGAAGATAAAACTTTTGTTTTGAGTTCCTTGACACTTTTAAC AAAAAACTGTTTTTATAAGTTGTTTGTGAATTTATTCTATCAAAAGTAAT TGGCAATTTAATTACAAAAATGACGTTACAAACCTTAAAAAGACGATAAT AAAATGTTATATTGCCCTCTTTTACAAAAAGTGCTAAGTTGTAATGGGTA ATTAACCTTTTTGTTTCGAAATGTTTTTAAATTGTCTGCAAAAGATGGAA AAATTTTCTAAATTGATGTTTCAAAACTTATGACCCTTTTTGTACGAAAA ATTGGGACACTATTTTCAAGATTTTGAGACAAAGAAACTTTTACATAAAT TTCCGAAAATACATTGTTAGTTTAGTTAAAGATACACCATTTAGTGCAAA AATATTTTTTCTTCGCCGAAAATAAGCTCCTCAAAGTTGAAATACTTATC TTCGCAAATGTCTTCATTTTCTTCTTCGTCAAATTTTTTCATTGCGATCT TTAGATTTTTAGATTCAGGAATAGTTTGACTAACATAAAATATATAACAT GCCATAGTTTTGTTGGTTACATCAGTCAGAAAACACATTTTATATACGAC AATTATGAAAAATTCACTATGGTCAGAGCCCTTAAATCGAACTTCCACAA CTCATGTCTCCTTTAATTAACAATGCCTTATAAAACTTACTTTATAACTC AAAATTTCCTCAACTTGAAAAAATTTGTGTTCCCTGTACGTGTTCAAACT ATTTAATTATGGTATAGGTCATGTTTGAGTTCATTGGAAAGCTCTCTTCA AAATCTTTTCAGCATGTATTTTCTTTTGATTAGGTCCTAAATCGAAGCAG CCGAAAGAATCGTTCATAAATAAAGGAAATTTAGCTCGGCAGTACTGAAA AAAAACTTTGATCATATGACAGCTTCAGTAAAAACAAGATAAAACTTAAT CCGAAAATAGATTTTGCCATGGATCAATGTGTCAGATCACAAACAACAAA ATTTTCATTTTTTGAAAAAACTAATATTTTGCTTCACAACGAAAAAGTTA AGTAAGGAGAGTAAGGCGTTATTTTCTGAAAACAGAATGAATAGTCGTTT CATTTTTCTCGCCACCATGAAAAAGCATTTTTCGAAGATGAATGATTGCT TCATCTTTTCTCTTTGTTCCGTGTTTCGAAACAGTTCATCCTTACCTCAA TAAAAATTTAATGAATCCATTAAGAGTCATTAAAATTGACCACTAAAACC ACTAAACTGTATCAAAGTATTTTTAATTCGCTTTATTATGAGTAATTTTT GTGGTTAAAATAAACCCTGAAGCATCAAATTATGAGTGATAATGAACCCT AGCAAGAGATTGAAATGTGAGTGATACACTTTTTCGACCGTGTAGTCGCG CGGTCAGGCACGTGTCACTTTATTATTTAGCCATCCCCCTAAACTCGATC GAATCCTTTTTATACACCTTTTTCTATTGTCTCTAGGAGCAAAAAAAAAG ACTGGGTGGTTTTAGGGTGGTAAAACAGACAACAAAATGCCCTCGCGGCA ATTGGTGGCTGCGGTCAAAAAGGTATATTTGATTCACATCGTCGAATAAA CTTTTCGACCGCTAAAACGGACACAAAGGCCGAGGTTAGTTGAGAAATAA ACCTTAGATATGAGGTCAATCCCCCAGCGGGAGGGGGGGTACTTAGGCCA AAATGGGTGCCTTAAAGGGTCGGTTTTTTCACCTTTCAAAATCTCTCTAA GAGTCGAAATAGTCACGATTTTGAGAATTTTTTTTGTTTTTGAGAGTNGG GGGGGGGGGGGGGGGGGTACTTAGGCCAAAATGGGTGCCTTAAAGGGTCG GTTGTTTTTGAGAGAAAAAATTTATAAAAAAGTCTATCTAAGGGTAGGAC TTTTTTCAAAAGTGGAAGAGAATTTTTCAAAAAAGTCTCTCTGAAAGGGT CAAGGTTTGGAGGTCCTGCACACACATACCCATCATCCCGTAACCCTAGT ACTTCCCCCCAAAAGGGGGTCAATCATGCTATATAATACATTCGTCCATT AATTTTTTTAACCAAATTACTAGAGAGTTCAAAAATCATCGAAATTTCTT TGGAGCGTATCAAGCGTATTAAGTTTTTTGGAAAGTGCTCATGTAGGAAA AGGCTTAGAATCTCGCCAAATACCGGATGTTTTTGACTCAATTACAATGC ATTCTACTCTTCGAAGACAGTATTATTATCATGGCCATTTTGATATCAAT ATTTTAAATATGAACAGCAATTCTTGTACCGAAATTTTTATTACCTGAAA TAATGATGAAGCAATTTTGTGCCCACTATAGTAAAAAATGCCTACAATAT CACATTCCCAAGCATGATTTATGATTCTAAAATCTTCTGAGTCAAATGCA AATGATGATATTACAGTTTTTTCAGTTTATTCTTCAAATAGTTTGATTTC CTAAATCCATAAATAAAATGGTAGGAGGAGCTTGTACATTAGTACTTGAT TATTGGGAAATGAGTGGGTTATAAATATTTTGTCGCTACGGAATCAAAAT CTTTTTCCAACGAGTTTGTAATAAAAAAACTACTTATATTCATCTGAATA TTCGGTAATTACTGACATTTGTCAGCATTTACTACAAAATACACAGATTT AAAATATTAAAGGCTCGGACGAACCTTAGGTATAACACTTGGGATCCCAC CAAGACTTTAAGACATTCCCTTCTCACAGACCCGGTAGGATTTTTTCGGC CAGTAGGGGTATAAATAGCCAACTGAGACTCCATGGGGTTTGATATTTCC ATATTTTTTATGTCTGGGGATTTGGATTCCATTATTTTAAACAAGAAAAT TCAGTGAAGATGGGAAAAATAGCATGAAATTTTGCAGTGAGGATTTGTTT ATTTGATTGTTTTCAGTGGGGACAAAAATTGAAAAATAATTCTCCACAGG AGTCGATACTTTGGCAAATCTTTCCAGTAGGAAAGGGTCCCAGTGGTTTC TGGGGAATTCGTCAATAGCAAACAGGTTTATTGATACAGTCAGCTATATA TTAATATGGTAATTTTTGCTCTTCATCTTTGGTATTTTATACAATGATTA GATTGACACATGCACGATAAAATTTATATTATTGGTCGTCAGAGGTTGGT ATGTTCTTTGAAAACTCAACCTCTGAACTCAAGGTAATGATGTTTAAATT GCATAAGAATTGCGTAATATAATTGGTCCAGTGCGCAGCAGAATGGACCT TTAAAAAGTAACTGATCGAAAAGATTTTGTCTTTGTCGGGGCCTGTGCGC GCAATAAATTAACAAGTCCAGGCTAAACCAACCGCCGATCTAGAATTTTT GCCCCGCCTACCCGCGCGATATTTGACCTATGTTTTGGATTGAATTGATA GTAGAGTCAAATTTCACAGTTAGATTAAAGGGTTGTTTCAGGTAGGGTTA GGGCTAGGGTTGGGGCTAGGGTTGGGGATGGGAGTTAACCCCTGGTTAGG GTTTTAGCCCCCGGGTAGAGTTTGGAGTAAATACCATGTTTATAAGCAAC TTTGACCTCCTTAATGCAGTTGTGACTTGATGGCCGAGTGGTTAAAGTGC TGGCGCTCTAATCATAGGTGCTTTGTATATAGTGGGTTTAAATCCCATCA GCGGCAAAAGTTTCGAAATTTCGGGAAAGGCATCAAAAACTTTCAAAACT TAGCAGTACAAAGAAAGTGTCAAAGAATAGAAGCTCAGAGTGGAGGATGG GAAGGAAATTTTTTTGCGTCACTTAAGGAACCCGGTACGAACGACATTCG GTTATTGCCACGTCAGCTGGACCTTCACGCCGTTCCGGCTTCTTGTTTAC AGTTGAATTTGATGAAGTTTCAGTAGCGTAGACAGGAGGGGCGCAAAATT TGTGCAGGAGAGCAGATTTTTATTACACAGTAATCATCTTTTGTACCGTA AATAGATAATTACAGTGTCATAAGAGNTTGGGAACCACTCTCAATGGAAT TCTTAACTAATGAAGCTACCCAGCTGGCACACAACGTTGTTTGAGCATTT TTTTAACGTTATATGTACGTTGTGAACGTTAGAACAACGTCGAAACAACG TTGTGTGCCAGCTGGGTAACATTGTTTCCACATCTTAGTATAGAAGAATA CACAATTAACACGAATAGACTTCAATTAACAACGACATCACTTTTTTTAC ATTAGATTTCCCAGGTTTATCAATGAAGTCATTTGTCAACCTTTGGATCA ACCAACAACGAATGCAAAACAAGAATGTCTAACAGGCTCTGGAAATTGTG TGGAGAAAATTCTGAACATTCCATTTCGTAAAGACACTGAAAATCTTGGT GTTGATAGACTATTTGAATGGACAACTTTTAACCAACCTATTCGTGCAGC TTGTAATTGTGAAATTCACCAGGATTCACCCTTCGCTATTTTCGTGTGAA GTACCTTAAAAGAAGAATATCTTTTGGTAAATCGGACCAAAATTTCTTTC CGCTGAAATTTGTTTGTTTCAAGATAAAGTTGAGGNAAATGTCAAGTTGT GCACATTAGCATAATTCCGCTCTTAATTAAGTGGCGTTTGTAAATCTTTT TGAGAGGTTAAATATCATGAAAGCAAGCCCGTACGGCATGTCTTTTTTAC ATTACAGTCTTGATCATGTTAATACTTAGACAGTAATAACTGGTTTGGAG GTCAATACGGTAAAATATTGACTGCAACCGAAGTACAAACCGAGCTTGCG AGGTCTGTGCACAGAATAAGGTCAATATTTTACCGTATTGACCGAGAAAA CAGTTATATTATTGTGTTTATTAACTGGTGAACATTCTTTGTGTGTTTCT AGCCAAAAATATGCATTTTCCACTCATTTAACATGATTTTTTCCTTTCTT TTTTACCCAATATTTTCTTTGATCTATTCTGACGTTACTTCCTTATGTGA TGTCATTGCAACGTCAGTTTTTTAAATCATGTTCAAACTAAAAAAACTTT TCTATGAAACAAATTTCCTTTTTCAAAATCATCGTCAGTGTGACCAAAGC ATTGAAGTGGTCTTTACCGTATTATATTGACCGCTAGAGAACCAANAATG CAGAGGTAGTTCCAAATTTATGGCTAAGAGCCTCAGTATCCTTATAATGA CTACGTCTAAAAGAAATACACTCCACCATAAAAGCCCCCCTTAAGATCTA CTAAAATATCTTGAAATAAAGAATAACTTGCGTAGAGAAACAATGAAAGA TTGCACCAATACCATATAAAGTAAAGACTTTTCAAGGAACAAGNTTGTAT TGACCGACTTTTGCTTCTTTGCTACCATTTGGGAACCACTCTCAATGGAA TTCTTAACTAATGAAGCTACCCAGCTGGCACACAACGTTGTTTGAGCATT TTTTTAACGTTATATGTACGTTGTGAACGTTAGAACAACGTCGAAACAAC GTTGTGTGCCAGCTGGGTAACATTGTTTCCACATCTTAGTATAGAAGAAT ACACAATTAACACGAATAGACTTCAATTAACAACGACATCACTTTTTTTA CATTAGATTTCCCAGGTTTATCAATGAAGTCATTTGTCAACCTTTGGATC AACCAACAACGAATGCAAAACAAGAATGTCTAACAGGCTCTGGAAATTGT GTGGAGAAAATTCTGAACATTCCATTTCGTAAAGACACTGAAAATCTTGG TGTTGATAGACTATTTGAATGGACAACTTTTAACCAACCTATTCGTGCAG CTTGTAATTGTGAAATTCACCAGGATTCACCCTTCGCTATTTTCGTGTGA AGTACCTTAAAAGAAGAATATCTTTTGGTAAATCGGACCAAAATTTCTTT CCGCTGAAATTTGTTCGTTTCAAGATAAAGTTGAAATGGAGGAGAAGAAG ATTTTAGAATAAAGAATACAACTTCCGCAGAGAAGAATTGAAAGATTCCA TCAATCTCGACTGAAGTAGAAATTTCCAAAGAACATTTTTCATAAAGAAT AACCCTCGTAGAGGAAAATGGACGGATCCACATATTTCGTACCAACAATC ATTTCATGATCAGATTCCAATGCAGAGGTAGTTCCAAATTTATGGCTAAG AGCCTCAGTATCCTTATAATGACTACGTCTAAAAGAAATACACTCCACCA TAAAAGCCCCTCTTAAGATCTACTACTATATCTTGAAATAAAGAATAACT TGCGTAGAGAAACAATGAAAGATTGCACCAATACCATATAAAGTAAAGAC TTTTCAAGGAACAATTTTAAATGAAGAATAACTCTCACAGTGGATAATGA TATGGTGGTTATTTGCAGGCGAATTATCCTCCAATATCTAAAATTATTTT ATTTATGATAAGATTTAAAGGTGCACCCTATATTAGTACCACGTCATTCA ATTTGAAAATACAATAACCTTGAAAAAGGACGATGTTTTTTCCTATGAGC ACACTCCTGCTATGTAATTTTGTGGAATTCTAAGTTTTGAAATTAATTAA TTTTATATTGTATATCTTACATTATAGTAAAATTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058028TCONS_00058028Clytia hemisphaericatranscript
TCONS_00058027TCONS_00058027Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058027-proteinTCONS_00058027-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_304supercontigscaffold_304:183226..192862 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.74 2.92 0.95 0.52 0 0 0 0 0 0.03 0 0 0.48 0.28 2.89 0.49 1.21 0.25 0 0.09 0 0 0.74 0.67 0 0 0 0.14 0 0.21