XLOC_036637 (gene) - C. hemisphaerica

Overview
NameXLOC_036637
Unique NameXLOC_036637
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_307:131281..138467+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036637 ID=XLOC_036637|Name=XLOC_036637|organism=Clytia hemisphaerica|type=gene|length=7187bp|location=Sequence derived from alignment at scaffold_307:131281..138467+ (Clytia hemisphaerica)
ctttgatcaaaaGGTTCTCCTCAAcaagttttgattttaatttaacATCC
CGTCGCTGACGTATCAAGTTAGGATTTCATAAATTGCAATACGGAAtaaa
ttatcattattttttgggGACTTTGAGGCAAATTACATCACTTATATCAT
TTTATTGAGCAAAAGGTAAAATTATTTCGGATAAAGATATGGGAGTTAAT
GAAGTGGCAGATCGCAACAGTCCACCAGCATTAAACATGGAGACTCTACT
GCAAAACAAATCAGACATCAAATTGAACGGAAGCACAGGAAAATATACCG
AAGATGtgcaagaagaagaagattATGACTTTTACCGATTCATTGTATCT
GATTTCCATGGCATTGCTCGCAGCAAGTTGGTTACCAAATCTGCGTATAA
ATACATGAAGAAACGAGGTCCTGGAATCGCCTGGAAAACCGTTTTGTTGT
CCTTCGATAACTACTTCAATTGTGAAGCGAAAAGGTTGGATGGAGAAAGA
TGTACTGATGCTAGGTTAACTCCAGCTGAAGATTTGAGCGTGCCGCGATC
ACTTCCTTGGGCAGGAGAAGGGTATAAGATTGCAGGTGTTTTGTGTGAGA
CATGGTGGGGTATTGATGGGTTGCGACAACAAGCGTGCCCACGATACATG
GCGCGTCGACTATGTGATCAACTAGAATCGGAATTTGGTCTTCGCATTTT
CCACGGTACCGAGATGGAGTTCACCTTGTTCAAAGAAAAGGGTGTGCCAG
AGTTCGATGATGGTGGTTTGTACATTCCACAGGAGTTGGATACAGTGTGC
AAAGAACTTCTCCCGTTATCCAAACACTGTGAAGCTGCTGGTATCCCTAT
TGAAACATTGCAAACTGAATTCGGTCCTGGACAGTTGGAGGTAGGCTTTA
GTTTTTCCTTTTCCTCTTTGGTAAAATTTCCCTTCATCAGTCACCTATGT
CTCACTGTTTGAAGCTTGAGATTTCTGTGATAAAGCTTGACTAACTATAC
GTTTCTTTAGTAGAAGATTTTCCGGTAAAATATGACAAAAGCGTGGACCT
TCAACTCAAGTCACATATAGGATCTTTCAGTGCAAATTAAGTTTCAAAAG
CTAAATGATAACACAGTAATAGAAATCTAAGAAAAGGAGACGAGATTCTT
CATACAGAAAAAGGGATAGGTTGATTCAACCGTGGATGTTATATGGTGAT
caagactttacaaataaatatcccttatttttttctttaggtTGTTTTAA
AACCAGCATACGGAATCGAGGGAGCAGACAACAGTTTCTTATTCAAATGT
GCAGCTAAAGAAATCCTTGCAAAACCTGGCTTCCATGGACGCGCAACATT
TATGTCTAAACCAATCATCGACAAAGTTGGAAGCTCCAACCATTTCAATC
ACTCTCTTTGGAAAGTAGGTTTAGTACTTTTTAGTTATTAAAGAATATCA
TATGTTTCTAAGATTTTATGTTTTGTGAGGTGAATGGAATATGAAGGGGC
AGGGTTCGAACCCAGGAAAAGCGTGGTAAGAATTATATGGTCGCCAAGTA
ACACTGCCTCACTGCCCTGGTGgaaattttttcctcagtggggataaaaa
ttcctattgaaattccaattgGGATATAAATTTCATTGTTGCAAGGTTGA
AAAAtacagtggggatggttttggagtgcaaacGGGACGAAAGAGGGacg
aaaattttgccaaattttttcATGGGGCTGggatcccagtgggtctgtaa
cACAGGGGTGTAGTAACTATCAAGAAAAATACTCTATCGGATTGTGCGAA
AGATCCTCCTTGTTATGGGCCATATTATTTTTCTTGAAGGTGTAGTGAAG
GTGTAACTTCTCGGTCGAGGTCAGGTCTCTCTTAAGAAAACTGTGCATTA
TTATCAAAACGTAGTAATAGAAACAACAAACTTTTCTTAAACACTCTATT
TCAGGTAAAGGACAATGGTGAACTAGAAGACTCGATGTGGGATGGAACAC
AGGAGAGTAAACTAACCAAGACTGCTCAACACTGGCTGGCTGGAATTCTC
AAACACACACCAGCCCTCGCAGGTAACCTATCGTCATAGCACACCAAAAT
TGAAAGTCACACTTATGTGTATtatcaagaaaaaattcaaaattcttaaG
ACCATAAAAAACGGTTGATTTGAGATAACAATCATGGCATTCTTAAATAT
AGAAACATTTTTTCGAAATGGTGCTTATGGTGACGTGAATGTATAAATGg
gtgaaatttaatttttcgtACAACCTTTGTTATCTCGGACAATCTTCGGC
AGGATATGTCCTTTTTACAAATATCTTatggaaaatatcaaaatgatcAA
CTGATGATGAAGGGGCAAAATATCATATGACTATGAGCAATTTATGAAAA
ACTTCATGAACATTTGAATTACCAAAATACATTTTGAGGTTAACAAACAC
CTAAATTTAAACcacattttctttcattttcagccatttttaaCCCCACT
GTCAATGATTGGAGAAGATTACATATCACAGCTAGTACTCGCGATATCAG
TAAGTCTTGTGACAAATACCCATAATGCCCTCGCAAAATTAAAACCCAAA
ATTTCTAAGGTGTTCAAAAGGTTTTCTCGAGTAAGTCTGCCACCACATTG
GGCGACCCAAAAGGTTCCTCTTTTGACATACCAAAAGGTATGGGAGGTGC
CACACTCCGTTTCTTCACTACGTCTTTTCTCTCGAATACCCATTTTctag
taaaacaaaaaatttcagatGTCTCCTTAGCCGGTGACTACAGCATAATA
AAATCACTCAAAAGCTCTTACCTCAAAAGTTTAGCAGCTTTGATTTTACA
TCGAATAGCCTATCGTTTGAAGTCTTTCAACCTTTAAAAACGGGATAGAA
AACCTTAGAATTGAAAAGAAACTCAATACTCCCGACACGGTTACTTTTGA
ATAATAAcgtaattttattaaaataatatCACGTTGTCAACAGAACAAAG
CATTGAGCTTTAAGCCCTGAAGGAATCTGTTGGAACCTCTTTCTGTCTGG
GCTTTAAACCCAGTTGAATAAAGAACCCGAACCACTCCAGCCTTCTAAAC
AGTTATAAATATATAAACATACTCACCGTGAATAAATTCTTTTTTAGCCA
CTCCACATTACATCACATGGGGTATCGAAAACCGATTAACATTGATTCGT
GTTATTGCTCGAGGTGCTGGTAAAGCTACATATCTAGAAAACCGGTTACC
CGGGGCAACCATGAATCCGTATCTTGCACTGGCTGGTATGGTTGCTGCCG
GTATTGATGGTATCCGGAACAAAATCGAATTACCGGCTCCTGGAAATACG
GAAAATGAATTCGGAGTTTTGCCAGGTACTCTTGAAGAGGCTTTGGATGC
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NNNATTTTCTTCTAAACACATgcaaaatcaggcaaaaactTGCTTTCTTG
AACAAAGTAGCGCTTTTTTGAACGAAGTAGCCTTACTGTCAAGAATGATT
GTGAATAATCGCtaggtaggaaattaaaatgctagggtgaaaagtttcct
tttgagttgttcttcaaaatgaacATTATTTTGGGACCCCGGTCCAGGCC
CTGCGATGCCGGTTTTGGTCCATAGGCTAGGGCTAAGTAGAAGGTTTGAA
AATCTTCAATATTCTTAAtataaatatttctttataaattaaaatgaaaa
acaagcGATGTACCAGATCTCATTCTTTAATATATAAAGCTCGCGTTTAA
AAATCTCAATATTTACAAAATCACACAAAATCATACAAAAAACGGTCCCA
AAAACCAACAGCCTGAGAAAAATATATTAGATTTCTATAATACAAGTTTG
TAGTGCATAAAAATTACACTATAATAAAATTGTTAAGGCGTAGCAATTAT
TGAAAAAGCAATCATTGGGAAGCTTGGAATGTCTTAACAATAATTGTATA
GACCAATGAAAATGTAGCGAAAAGCACAGATGATCATTacagatttttgt
ttatttgaccAGAAAGTTACCAATAGCTAGGATACCATATGAGATAATTT
AAGGATATGTTGTGTATGAATAGTTGTAAACAGTATCATTAAAAATGTAA
TATATAAATGTGCATGTGATTAAAAGGGTTAGTTATAAACATTACAATTA
CATACAAAATAAGCCACGAATaaatcatttcatttcatttatatatataa
aaaatttcccccaaaaaatgAGTCGGTCAATAAACAGGGTAAggtatgaa
gaaaaagaaaatacaaatcttcctaaaaaaatactgtataaaggcttggg
gacacaagaagttttttttcgcatTAGTGCAATGCAACATACTTCATctc
accaacctgaaacgctttctcgtgtcttcaccccatttttctttcgacca
ataaaagtgaaatctcacttttgtccctgggacagtGGAACAAAATtaat
tcgaatcaattttgctccattgtcccaggggcAAAagcagcgtgtctttt
gggtatttccctcactttttgtcccatgaaacaaaaacaaaaaaccatgg
ggaacgcactttttttcttgtgttgNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTAGAATTGAAAAGAAACTCAATACTCCC
GACACGGTTACTTTTGAATAATAACGTAATTTTGTTAAAATAATATCACG
TTGTCAACAGAACAAAGCATTGAGCTTTAAGCCCTGAAGGAATCTGTTGG
AACCTCTTTCTGTCTGGGCTTTAAACTCAGTTGAATAAAGATCCCGAACC
ACTCCAGCCTTCTAAACAGTTATAAATATATAAACACACTCACCGTGAAT
AAATTCATTTTTAGCCACTCCACATTACATCACGTGGGGTATCGAAAACC
GATTAACATTGATCCGCGTTATCGCCCGAGGCGCCGGTAAAGCTACATAT
CTGGAGAACCGGTTACCCGGGGCAACCATGAATCCGTATCTTGCACTGGC
CGGTATGGTTGCTGCCGGTATTGATGGTATCCGGAACAAAATCGAATTAC
CGGCTCCTGGAAATACGGAAAATGAATTCGGAGTTTTGCCAGGTACTCTT
GAAGAGGCTTTGGATGCACTGAAGAGTAGTAGTGTCATGCGCGAGCATCT
TGGTGATGAATTTGTCAATTGGTTTGTGTGTGCCAAGGAGAAAGAAATCG
AAGTCTTGAATGAATACACAGATAAGAATGGGGGCGATTCTTTCCAAACT
GAAGTTGACTTCTATTCCAAATGGATCTAAATTGTGTTTTAATGTTACTG
TTTTATTTTAATATCTTTAtctggaaaaaaagaaagaaagaaaagactGT
ATTCTAAAAGCTAATCACGTGTCAAAGAGACATTATAAGGAACTATCAAT
TCTTGGAAATGAAAATGTAgaatagaaatattttaaatttatatGATAAA
GCAAAGAAAACACCACACTGCATTTTATAGATGTAAAAGGGGAGCTGGCC
ATAATAGGGAAACTACCTTTTTGAAGGAACAATCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058127TCONS_00058127Clytia hemisphaericatranscript
TCONS_00058128TCONS_00058128Clytia hemisphaericatranscript
TCONS_00058129TCONS_00058129Clytia hemisphaericatranscript
TCONS_00058130TCONS_00058130Clytia hemisphaericatranscript
TCONS_00058131TCONS_00058131Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058128-proteinTCONS_00058128-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_307supercontigscaffold_307:131281..138467 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LGSNPREDICTED: lengsin isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0.07	0.07	0.05	0.71	0.19	1.67	2.08	32.83	14.87	31.73	21.74	51.12	46.77	35.46	54.08	47.98	52.4	3.48	4.5	52.66	53.77	32.36	45.31	43.85	44.46	10.87	4.89	0.09	0.34