XLOC_036638 (gene) - C. hemisphaerica

Overview
NameXLOC_036638
Unique NameXLOC_036638
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_307:151562..158116+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036638 ID=XLOC_036638|Name=XLOC_036638|organism=Clytia hemisphaerica|type=gene|length=6555bp|location=Sequence derived from alignment at scaffold_307:151562..158116+ (Clytia hemisphaerica)
ACGAAACAAAATGTCTGCCGAAAATGATCACGCTGGAGCAGGTGAAGAAG AAGATGCTACTGAACTTCAATTTCCCAAAGGTATTAATTTATTTCATTAC TTCATGTAGTCAACTAAAGGTTCTTTAAATCTAAAGGTGTTAAATTGTTA AAGTTTTGTTATACTGGGGAATCTGAATTTGGTAATAACTTTGACTTTTT TTGGGATGTATCCTCGCAGGagggggtcaacatccagataccagacccat agccgggtggtggtgtctttttttcctttaaaagtctgaaaagtcaagtt ggtattgatgggggtgggtccccNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNtcgataccaattttggggtggtggtgttaa cttagctcaaaaggtcaaaagtcaggtttttgggctatgggttggtatta taaatgttgacccccccccctgatccTCGACACAAAaaactttcagattt ttttccggCATTGGGCTGATAAAGGGGTGGGAGGTCCAActacataccga taaaaaaacaagtattgggaCAAAGATCTTTTCAGACAATTTCAAAGTCT ATTTCCAGTGAAGGAAGAATAGTTTTTAATTGAGATCAGTTTTGGCACCG GACTTTTTACGAACACCCCAGCCGTAATTAACtgaaccaatcgaacggta tttttaatcaaactttgttgaacttaatcgaactttgttggcTGATTAAT GTTCGACTAAAAGTTCGGTTGTTGAACTTTAATCGAatacaggaccctgc cgacgcacccggactgtccggtgtatttgtccggtggcaaaaagtatcct ttcgctacaccagacgcaataagtccggtgtcagtccggtgttgcataca tgGAATTTTGGACGCCNNtacctgtctttaaaaatataaataaaagtaat cacggaaaaggacgcaaaaaaaaagacataagtgtgagaacagagtaatc aaactcgttagaaaaagtaccataagaagtcataaaaaatcaacctgaat aaatgcaatcgaaatttcAGAGAACTTCagaattccccaaacaacattac attactatgtcaaactcccatcacataaattttacaattacgtcagagta gactacgctcgccaccgaagaggtttatttggaaaNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNatgttacaatccaattattgaaagtttgtctcggccttttataatg agcgagacatacgttctctgattacgcaattttcatattgacattttcga ggcattttaaTGTAACtggccggacatttatgaaacaaaaaattttaaag aagcaccggacgcaccggactggtcatgtccggtgttttgattgtccggt gcagtggaaaaaatatccttctccgacaccggacatccgacttccttaag tccggtgtagagattgtccggtggtaaaaaaaattatcattttacaCCAG ACTTTAGTGTATCCAGGGTCCTtcaaatactcacaaatttctcaaaatac aaagttccaTTAAGTTCGATTAGTGAAATTGAACTTAAAAATCGAACTTA ATTGAACTTTTTGTAAAGAGACCTCaacagttcgattagtttgattacat taatcaaatttaatcaaacttaatcgaacttgaGCAACTGAAGGCCGCTC CACTTGCGCGTAATTCGATCTCACTTTTTTCCGGCCTTTggcgacacttt gaggaactttgaaggacccccgctggtgcaggcgtgtaccctcacatccc ctgaccagtgggcactgATCCAACCCTCCGGAACCCCGGCCGGGACCTCC AGGGGCCGTCCGCGGTgatacccaaaggaggtcatttttttctaattttc aagcctttccgcctttccaagccttttaaaggcttcggatgactgctgga gggtgctggctttgagggaaagcaaggcagagggtatctGAAGCGGTctg aagggctgtggtaggctgtagggggctgtagaggcctcgattggtcccac cggggcttgtacccaaaggaggtcattttttgaaatttttgccggctttt gacaatactttgaggaactttgaagggcccccaacggtgcagacgtgtac cctcacatccccctgaccagtgggtACCAATCGGACCCCCAAGACCTTGG CCGGGACTcccaggggccgtccacggtagtttccaaaggaggtcattttt tgttgtcaaactttTTCGAAcagagtttttttttgaatttgtcaaaCCTT TCTTGTGGTCGAACTTTATCAAACCgagttttttgtcaaatttgtcaaac atttctcgttgtcaaactttgttgaagTTAATATGTTtttgtcaaactta atcgaatactcacaattttagcaaCTTGAAAAGTCcgattaaagaattta atcgaacttttgtcgtgcgattaagttcgacaaagttcgattagttcggt aatcgaactgttcgattaattacgtctggaacaccggacacgcaacGTCC GGCCGGTGTTGGATGAGGATACTTTTTAACACCGGACAATCTCCTCAACA CCAGACTTGATTCCGGTGCGcattactttttaaacaaaCTTTGTCCAGTG TCCAGAAGTTCAAAAAATCAACACCGGACAAAATTTTTTCCGTGTGGCTG AGGGGTACTTTTTGGCACCAGTCAAACACACCAGAATGATATAGCTTCTG TTTCGCTAGAGCAACAGACTTGTATGAGTGTTTAGTAtgtacttattttt attttgttacgcAGAATTTGAGTCAGCAGAAACATTATTGAATTCAGAGG TTTTCATGTTGTTGGAACATCGTAAATCACAGAATGAAAATGCAGATGAT GAACAAGAGATGAGTGAAGTTTTCATGAAAACATTGAATTATACTCAACG GTTCAGTCGATTCAAAAACAGAGAAACGATCGCTCAAGTCAGAGGGTAAG TAGTACTTCATCTCTACTCAGAAAACTGAAACTTATTTTCTACCTACTAG TAGTTTTTGTAATAAATTTTCTGTTGGAGAGTAAGTTTTGGTGAGTCTGA AATTTGTAAGCTGTTTTCTACATTATATGATAATTAGGAAATAAGtgcaa aaaacaaaattaagggaatttaaaatttgtattttgtagGAAGAGGTTTT AGTGAAGGAATCAAAGCTCAGAACTCTTTTTTGAGTCATTCGCCAAAATC AATTTCTTACCGAGAAATACACGACGGGCACTGAAGTTAAAGTNCCTCTT TTTTGAGTCATTCGCCAAAATCAATTTCTTACCGAGAAATACACGACGGA TACTGAAGTTAAAGCTATTTACTCGCTCTTACTTATGCTCTTCTGTCTTA CATTTTACAGACTTCTATCGAAAAAGAAGTTGCACAAATTCGAACTGGCT TGCATTGCTAATCTTTGTCCAGAGACAGCAGAAGAAGCAAAGACTCTTGT ACCAAGGTTAAAGTTTTTCCCTTGTTTGAGTTTTTGGTTTAGTAGTGTGA CATGGTCTCGCATTGATAAAGTCTTGCTGAAATCCATAAACGGAATTTTC ATTTAGTTTGGAAAGCAGaatcttttattattttgaacaaatttaaaTGA GTTTGGGGTTTTTCCGCTTGAGTCAATCGCGAAAAGGAACTGCTCGTCTT TCAAATGAAAACACGAGTTGAAATTTTCAATGCTTCATTCCGGAATCCAT GAAGAAATCTCACGAAACGTCAGAAAGAAGTTCCGAATGTCTAAACGGCT TATGACTCtttctcgcaaaattaaataaaaagttCAGTTTTTGACTTCGA CTAAACTGAAACAGTCTGATAGTAGTGTTCTTTTCAAcatatccaaaata tttttattggtgGGTATGGGCACTACTATTTGCAAATGATTGTATATATC AATATTATTCTCTTATTTTTTCAGTTTGGAGGGTAGATTTGACGAAGACG AGCTACAGCAAATTCTTGATGAAATTAAAACGCACAGAAGTTTCCAGTAC TAATATGGAAAAAGGCTTGGGTTTGCTTACAACTTTGATGCCAGACGAAA GATTCTCTTAGCATCTAGTTTCTGAACATTTTTAATGGAAAGGTAGACAG CGTATGGCTAACGTTTTTATGATGATGTCTTTTCTAGAACATGAAAAATG GCTTATTTATTGATTCATGAGGATAACTGTGCGTAGTCTTCTTTGTTGAG TGAAGTAAGGaactttttgtaaatatttttaccaatttttcatttttctg ttaaTTCTAAAGACCTAACAATCAGATAAAAAATTGCATCGTCTGATTTT GATCACTGTTAAATGACCGACAATGAAatggttttgattttgagatATGC ACCAGAATTTAAATCAAagtatttcttataaaaaagatgaaCTTTGGGAA TATTCTATAAAAATAGATACTAATAATAAAAGAAATCTAATCAATGATGG TTTAGTTTAGTCTTCTTTTACAAAGCAGTATCGTGTGAATCTTGTGATGT CGTATCTGCGCTTTGTTCCGCACGCTCCGATGGAGGGTCGAAACTTTTCG ATCTCCTCCGTGGTACTTCTTCAAAGTCCTCTTCCTCTGGGACGAAAAAT GTCGACTTCGGTGAATTATCCAAACTAAATTTCTTTATCACAGTCATTTT GCTCGCTGATTTTTTCAAACGTAGCgataaaaatttcttctcttctGGGA CAATTATTATTTGTGGTGGTTCAGGGGTAATTTCCCCATTTCTGGGACTT TCCCCTTCTTCTTCCGGTAGTTGGTCTAAGCCCTCCAACAAATTGGGATC AGAAAGAGCTCGCTTAAAACTATCAGTTGAAATGCTTCTCTGTTTGTTGC GACTTTTTCGTAAGGCTTCCACTCGGTCGCCCACTAAAAGCCATGATGAA GttcgtttgaaattttccaacccctcaTTCTCCTTTTCTTTGCGCTTGTG TTCGTCCGCTTTGTTGTAACATTGTTGGAAGATGTCTAGTGTGCTTCCTG TACCGTTGAGCGTTGATAAGTATACTCTCTGTAAGGAAATAGAAAGTTTG ACAGTCACTACAGAACTACAGTATTGGAAAAGGGCCACATACAGAAGTCC CAGAACAGATAATCTTcgcttgataaaaacaaacaaaaactttgccaacc aaaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058132TCONS_00058132Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_307supercontigscaffold_307:151562..158116 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
83.32 79.52 109.38 113.54 40.6 29.68 40.23 41.87 52.39 40.91 42.1 45.04 23.23 20.23 29 27.85 44.48 47.79 12.93 16.45 38.99 34.11 48.88 43.24 31.98 29.42 33.39 25.21 21.84 20.24