XLOC_036646 (gene) - C. hemisphaerica

Overview
NameXLOC_036646
Unique NameXLOC_036646
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_307:157327..164092-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036646 ID=XLOC_036646|Name=XLOC_036646|organism=Clytia hemisphaerica|type=gene|length=6766bp|location=Sequence derived from alignment at scaffold_307:157327..164092- (Clytia hemisphaerica)
TACAAGTGCAAGAGAATAAAAAGTGCAATCTTACTAAAATCTCTCTTGAT CAAATTACTGTGGGTAATATTTCTGTTACAAAGTTTTTTGAGTGTGTAGT GAGGTTTACCTTACACAAAGTCAAAACATAAGAGGTTATACTGTTTATAC TTTTAGGGTTATGATGCGATCTTGTTAAACAGCAGTAACTGAAAATAAAT CATAGACAACAAAATGATCCGGAGTAGTGTCATCAGCAGAAAATCAAAGA GATCACAGAAAACAAGAAAGGTAATAATTTCTATGGCAACCATTATTTGG TCCAAGAATAATTTCTTACTGTCAATCCCACTGAATTTGGACTAGAGAAG AATCTTCGACCTTTCTCAAGCACGACAAAGTGAAGCTTTAATTTTGCCTC GCATTTTGAAATTTTGTTTGAAAACACGCGGGTCGTTTGTTTCGGATGGG AAATAAGTGGCATTTTCCATCCAGGAGTTTCAGATCTAGCCCATTTAGGG CTTGAAATCAATGGTCAATCCTGTTTGAAAGTAAAAGTTTTTTTGCCAAA TTCTAGAAACTTGCTGTATACTTAAACTTCAAAAGCAATGATCGATGGTG GGAAAGGGACTTCATCCTTGTACTTTAGATGAAATTTATTCCGGTTTACC AATCCCTTTGTTTTCTTAGCCAATGGAGGATGTATTATCACAATATGCTG ACCTCATACAACTGAATGAAAACGAGGTTTACAGGCTTGAAAACAAGTGT GAAGATTTAGTGGACTTCTCCAAACTGGATGAAAAATGCAGACGTCAGCA ATACCCTATCTTTGAATTTATCAAGACTGAAAAAAAATTCATTCAAAAAA TACACGCTATCTGTAAAGTAAGTCAATTCAAGTTTCTTTTTCAGATAAGA AACCTCTAAAAAACAGGAATACTGAACCTTCCCAAGAAAAAATCTGTAGA AGAATCATATACCTTTGCTTGAAAAACTCAGTTGTAATTTTCTAATTGTT CTAGTGATTTTAAAGCTAGTTTTGAACCTGGACCATTACAATCAACTTTC ATAATGATAAGAAATTGTAGCAACTTTGTGCTATTGTATGGGCTATATTA TTTATTTCCCTCGCCCTCTATGTTGAGGGTTTCTGTTTTAAGGGAGTTTC CCTAGTCAAATAATATGTAAAATCTAGAAGGTGAAGACTTTTTTATGTAA AATATCTGGTGTTATTAAATATTTCAGCGTTTCAAATGGGTTTCTAAGAA GTATCCAGGTAGTAATTTAATAGGATTAATTTTCGCGGGGATTAAATTTC ACGAATGAGCTCATCTGCGAAATTTTAAGATTTCACGGGGACTTAATTTT GCAGATTGCACTATTGGGTGACAATATTATCACAATCTTCTGTATCTTCT GCCTTTTCCTGTCAAATCATGCATGATGGTTATTGAAATACGCCTCTGTG ATGCCAGTAAACATTTAGAAAGTATTCGGTGTTTTGTCTAGAAATATTTC GCGGATAAGGCCTTTCCAAATATCCATTGGGACTTAATTTCGTAGTTACT CAAATCCGCGAAATTTAAGCCCGGCGAAAATTTATCCCATTAAAGTATCT GAAATGTCGGCAAAAAATCAATGGTTTTGAACTCTTTACGGGGAGACTAA CTTTTTCGCTCATATTTTATCCCATAAATTTTCTTCTGGTACAGTTATTT TGTCAGATCTTCAAATGTTTGAAAAATGATGGCTACCTAGCAAATTTTCA GTTTGAAGATGTGTTTGCGAATATCGAGGACGTCTTTCGCGTCAACGACA GAATATGGGCGACGTCGATTTACACGATGCTCGAAAAAACACGACATACA AAAGCTCCGATCAAACCCTCAGAAATCTTTCAAAGTTTTATCTATGTGAG TTTTTTAAATTGCGAACTTCGACTTTCAATCGAACTGTAGTTCTACTTAA TATTGGGATATAAATGTTTTCTATAAAAATGGTTACCACTATAACCACTA TCTGCCTACTATAAAAGGTAGCAATCTCAGTGATGGAACTAGTCTTAAAA ATAATGGGGTCATCAATTATAATAGTACAAAAATACATTCTTATTAGCCT TGTCTGCGTTTAAAAGCTTTTAATTCAAAAGCTTTTTGGTTTCTCACTTC CTGGTACTTCTTGATCTGTTGCTTAAAGGACTGAAATCAAAATGTCAGTT TTTATTAGCACTAGCCTGTCTCTTACTCTTTAGATGGATGACCAATTTCA GCCGTATTTGAAATACAGCATGAAATTTGAAGGTTGTGTGGAAAAGATTC GGCAAGTCACCAAAAATCCGAAGCAAGCAGATGAAGAATTCACGACGTAT TTACAGGTATGGTTTACTTTGGAATTGAAGGGATGGTCTTGCATTCCCTT TCTGAAAATTGGCCAAAAGAGGGATGGTTTCGATAAAGATTTCACTTTGA AAATTGAAAATCTAGACCATTATTACATTATTATCAATGAAATTATATAT TGTACTTTTAAACTGATTAAATCTAGCTTGCTAGCTTGAATTTTTATTTA ATCGAACATTGGGTTGATGATATGGGGGTTCATATTGGTGATAAGACACC CCCTTCTCACAGACCAGATTCGACCCCCTCTCACTGGAAGCCAAAATCGC GGGGTTTACCTATTTCAACTTGCAATTTCTAGTGCAAGACCCTATAAATT TAAATATTTTGCTTGCAGCTTGCGAATCGAGTGAATTGCCTGGATCACTT CGAAATTCACGTTAGAGAGACCTGACCAAAATATCGTCTTCTGTGGAAAA TTATATACTATAAGTTTTGAAGATAATCAAATAAGCAAATCTTCACTGCA AAATATTGTGCTATTTTACCCAATTGAACTTTCTGACTTGAAATAATTAG AACTCAAAACCCCAGCCATAAAAAAACATGGGAATATTAATCCCCATCGA GTTTCATTCCGTTATTTTTACCCTAACTGGCTGAAAAAATCCACCGTGTC TGTGAAATGGGGTTGTGACGAGGTATTTATTATTGGTAAAAGGGATCAAA GCAAAATCGATATTATATTTTAGTTTTGTGATAGAAAGGTTTCGAAATTA TCAATATGCGAGGGAATGAAAATACGAGATCTAATGAGCGATCCCTTGTC AAGAATGATGAAGTACCCAGACCTCCTGCAACGCGTTCGAAAATACACAC AAGAAGAAGATGAAATTCGTTTCCTTGACCTCATTGTGAGTACCAATAAA TCACCGAGTTTTATTGGAAAGCGATAAAATCCATGATTGAAGCTTTTTAA AGTGTTGCCCTAATGGGCTCTTCCAGAAAAAAATTGAAAATGGGAGGGGT GTGGAGGATATAACATTTTTTGGAAATATATCCCCTGGACATTTAAAATT ACCCCTAACCCCTAACAAGTTTGCCCCAAAAACAAGTCAAATTTTGCATT TTTTTTCTGATAGAGCTCATGAGTATATAACGTCCAGCAGTAAATTCAAA AAGTTGTGCTATTGGCTATGGGTCCAAAGCAATCTCGTATCCAGAGCCAC TTGTAGTTGTACCACCTTTCGTGAACGCTATCAGAATTATAAAAAAGAAG CGCTAAGGGACTGAATACGAATTTGGGTCCAAAGTTGTCAAACCCGAAAA GAAAAGCTTAAGCTATTGCTCTCACTTTTTAGATCAGCAAAATCAAAGGC TTTCTACGCAATATGAACACTGAAAAAAGGCGACGCCAAGAAAACGTGGA ATTACAAAGTTTCGTTCTCCAAGAACTTGATGATCAGGATGTTTGGTTTG CTGGAACTGAAGAAATCTTCTGGGTAAGGAAAAAATGTCACCTCGTGAAC ATCAGATTACTAGTTTATAGGCTTCTGTGAATTTCGTAAACTGTCCGTTT TACACAAGCTTATTATGAAATATCAATTAAATATCTCAAACTCCGTGGAA AAGCTAAATTCTTAGGTTTCTGCTCATCCTCTAGCGAAAAGAGTTTCTTA TATATATAGGAAGTATATCTTCTGTATACAGGTCTGTGATTCAGACTAGT CCAATTTTATGTCTCAGTGAGTGAAAGTCACTTTATGTATGTAAAAGAAA AAACTAGAAATAACCATATCCTCTCTTCTTTTTCACAGAGTGCAAAAGAG TTCTTGAGAGCACCAATGAAGGTTCGAACACGTAACCATAAAAACACAGT GAAAGAAGAACAACAAAGATGTCTTCTCAAACGTGGACCAATGAGAATCA GTCTAGAAAACAGACGAAAGGTGAAGGAATTCAGGCCTCAATAAATATGA AAAGTTTTTGATGCAAAGCCAGTCTTTTATCAAATTCCTCGTTGTATCAA AAATTTTTTTTGTTCAAATGTATTCTTTGGGCAATTTTTTATGGGTCACC CTAGTCTGTACGCATCCCTCTAATATGTTTTGATAAAGGGGATGCTAATC GTGTATAAAATTACCCCAACATTCAAAGGTTTGGAAATCCAATGATAGTA TTAACCTCTAGTCATTCATATTTTCAATTAAAGTTTTATGAAAATTATGA AAAGATCTTCCATATAAGACTTATGTATGGTCAAGCTAATCAAGTTCCTA AAAACTCAAAAACACGGGGGTAACTCTCAGGAGGGAACTTTATACACGAC AATCATCCCCTTTATCAAAACATATGATGCGTGTAGCTTAGGATAACACT TAGAAAAATTACATATTTTCAAAAGGAACACTCTCCATCATACAGAACAT TTTTAGTCTCACCCAAAATGCTGAGGGAATAAACATTTCAATAGATCTTA TCGAATAGATCTTTTTCAAGAGGATAGGATCAGTACTACCCTGAAAAGAC AACAAGAGCATGGCAAATTCGTAATAAATGATCATCCTTCTTGATATAGC TTGACGTAGAAGCCATTTTGTTCAGTGACGTTTTGATAATTGCACGGAAT CGAAGAACCAACAAGAAATTGACACTTGTCAAACAACTCTATTTCTTGGA TAAAGTCTTGTTGAAATTGTCTGAAGTTTCCAGTAATGGCGTTCTACTGA TTTACAAAAATGAAGTTGGATTACTGTCCGAAGTTGTCAAATTGGAAATC TGGGATTATAATGGAGAAGTTAATACACGAGATATTTGGTGTAATAAAGT GGAAATTGCCAAGGTTAGCTTTCATTAATAAAGGCCCCTCAGCGGTAAGT CTGATCATTATATCACGCAATTTTTTGTCTTCAATTACGATCACGCTAAT TCAGCAAAAATTTGGATTATCATGCATCCTGAGTCCAAATCACGCATCAC GATTCCAAAATCTTTCAAATCACGATCAAGTTTTGACCTCTGATCACGCA ATCACGAAAAAAAAATTCCAAATTACGTAATCACGCTCGAAAAAAGTCCC TATCACGCCATCACGAAAGCCGCTTGGGGGCCTCATTATAGTGGAGTCTC CATAACTCGAACACGCAAAACTCGGAACGCAAATCTGTCCAAGTTAAGGA AATTTCAAGTTGTGGAGTAAGGTTCATAAGACATTGAATTCATTGTTAAC TTTGACAAAAAACACATGTTCGAGATAAGCAGACAATTCGAGTAGTAGAG GTTCGAGTGCTGGAGACTAGACAGTTTGTAATAGCAAAAACAACGGGGAA TAAAAAGATGCTCGAAGCTTTCATAAAAGTGAGAGAGGAAGAATAACGTC TTCAAAGCCAAGGAAGTCTTTTTTATTGAAACAAGATTGATACGTTTCAC CGTGAAACCAGCGATTTGTTCCCCATATTTTTTCTCATGTGATTTTTAAG GGCTACTTAGACTACACAATATATTGACGACCAATATTTGACAATATAGT TTTCAGACTGTAATGTACGGAGTAAACAACAGGTACTCTATTATAAAAAG GAATTTTCTTTCTTAAAAAATCCCCCTATATTGTTGGAATATTGGAAATC GAGCTACTGAGGCTAGATATTGACAGCTTTTGGTTGGCAAAGTTTTTGTT TGTTTTTATCAAGCGAAGATTATCTGTTCTGGGACTTCTGTATGTGGCCC TTTTCCAATACTGTAGTTCTGTAGTGACTGTCAAACTTTCTATTTCCTTA CAGAGAGTATACTTATCAACGCTCAACGGTACAGGAAGCACACTAGACAT CTTCCAACAATGTTACAACAAAGCGGACGAACACAAGCGCAAAGAAAAGG AGAATGAGGGGTTGGAAAATTTCAAACGAACTTCATCATGGCTTTTAGTG GGCGACCGAGTGGAAGCCTTACGAAAAAGTCGCAACAAACAGAGAAGCAT TTCAACTGATAGTTTTAAGCGAGCTCTTTCTGATCCCAATTTGTTGGAGG GCTTAGACCAACTACCGGAAGAAGAAGGGGAAAGTCCCAGAAATGGGGAA ATTACCCCTGAACCACCACAAATAATAATTGTCCCAGAAGAGAAGAAATT TTTATCGCTACGTTTGAAAAAATCAGCGAGCAAAATGACTGTGATAAAGA AATTTAGTTTGGATAATTCACCGAAGTCGACATTTTTCGTCCCAGAGGAA GAGGACTTTGAAGAAGTACCACGGAGGAGATCGAAAAGTTTCGACCCTCC ATCGGAGCGTGCGGAACAAAGCGCAGATACGACATCACAAGATTCACACG ATACTGCTTTGTAAAAGAAGACTAAACTAAACCATCATTGATTAGATTTC TTTTATTATTAGTATCTATTTTTATAGAATATTCCCAAAGTTCATCTTTT TTATAAGAAATACTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058161TCONS_00058161Clytia hemisphaericatranscript
TCONS_00058160TCONS_00058160Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058161-proteinTCONS_00058161-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_307supercontigscaffold_307:157327..164092 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.36 tpm) - - (6.98 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.93 0.77 0.4 0.36 0.93 0.53 3.32 3.4 3.59 2.88 1.57 2.61 4.07 4.82 3.85 5.6 4.34 4.86 3.87 1.61 6.98 6.43 3.04 3.98 4.4 4.29 2 1.47 1.08 0.62