XLOC_036673 (gene) - C. hemisphaerica

Overview
NameXLOC_036673
Unique NameXLOC_036673
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_308:111900..115708-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036673 ID=XLOC_036673|Name=XLOC_036673|organism=Clytia hemisphaerica|type=gene|length=3809bp|location=Sequence derived from alignment at scaffold_308:111900..115708- (Clytia hemisphaerica)
CCCAACCAAATGGTAAATGGGTTGTAAAGGGAGATTTTTAATTCGTACAA
ATACATTTGACTGGGCGGAATAATTTTGTCGGATTAGTGAAAATCAAAAA
CATAATTTCAAACTCCAAGATTCTTTATTGGATTAGTGTGGTGGAAGGAG
AACGAAGAAAAAATGTTTTCTACGGAGCCACCTTCAAGTGCTATACGAGT
TTTCAACACCCAGAGTATAGACAGGGATACTCGTCTCTTTCCGTTGACAC
TGAGGAAGACTAGTGACTCATCTATGTTACTGGAAAATGGTGCAGGGAAG
TCGACAGACTATTTTTATAGTTTGTATCAGAAAGCAAAGAAAACTATACA
AGAAAAAGAAGAACAAGTTGAAATTTCGAATGAGCTTTCATCTATACCAT
CCTTATCACCGAAGCTGGTGAAGAAAGAAACAACAACAAATCTATCGCGC
TCTACGTCTCTATCTTCAACAGAAACTGGCTCTTCAAGTCATCGATCCTT
ATCTCCTCCGAAGTCTGATTCACCTCTCGTTGCAATGAATATCATTGGAT
CCGCAACTCCTAGACCATCATCACCTCCAGAGCTATCGTCAATCAACCTC
GATGACTATTCTGAAAGCAGACTCAGTGGCGATCCCAAATTCTTGGATTT
CATCAGATCCACATCAACTCTTTCAGCCAGATCTTCACCAAGGATTGAAC
AACCAACACCTCCAGATTCTCCCAGATCAGCACCAATATTCCCGTTCAAT
CCTCACAGTCCTTCCAGACTTGCTGTACTTGATAGTCCACAACACCATAC
CACTGAACCATCACATCGTCTCAGAAGATTCGATAGTCTACACCGTTCAA
TCACTTCAACATTTCATTCTAAACAAGAGTCTACAAACGTCGATAGTCTT
CACCGTCCTCAAGAATGTTTAACAGGAAATTGTAAATACCTCTTCCCGTC
TGAACGATGCCACGTATGCAGGCCTGATGAATTCCTTTATCAGAGAGGTA
ACTTCTAATGTTCAATTCTATTTTCATAAAGGCTTCATTTTCCTTTTTCT
TAACAAAAATTATTAACAATCTACTCGAAATCAAATCGAAGGCAGAACTT
CGAAATTAAGATCCAGCCTTTTCTTTTTCGGGGAAAAGGCCCCGGGCCCG
GGGGGGGGGGTACTCAGGCAAAAATGGTGCTGGGTATGTGTGGATTGACG
GCAAGGGTCTGTTTTTTCACCCTTCAAAGTCTCTCTAAGGGTTTCAAAAT
CGAAGAAAGGGTTACCTTTTCGGGAAAAATCAGTCTCTCTAAGGGTCTGG
TTTAGGAGGTCCAATCCGCACATACTCCTCATCCGCCAACCCTAGTACCC
AATTCAATTCAATTGATTTTATTTGAAAAGATCTCTTCTAAAATTGAAAT
GAAAATCCAGTTAATTTGCAGAGGATAGTGGTATTTAAGATTTCTAATGA
TTATTTGTTGTGTTATTTAGCTTTCTACAGCAGTGAGTTTCTACTCCGTC
AAAAAGAAAAATGGCGTCGGCCACGAACGGTTTACACTNCTTAGGCTTAA
AATAAAAGTCCGGGCTCTCTGGGGTACATAAATTAGACAGGTGCTTTAAA
ACTTGTCATATTGTTTCTGTGTATTCAATATGTCTAATGTGAGTGTTCTT
TGCTGGGAATTCACAAATCAGGCTTATGAAATTGTTCTTATAATCTTATA
TTTTTGCATTAAACATATTGACATTGTATTAAAATGCAGCCGAACAAAAT
CGAAACACTATGACTTTTATTGACTTTTAATAGATGGGTTTTACGTATAA
ACCCAACCAAATGGTAAATGGGTTGTAAAGGGAGATTTTTAATTCGTACA
AATACATTTGACTGGGCGGAATAATTTTGTCGGATTAGTGAAAATCAAAA
ACATAATTTCAAACTCCAAGATTCTTTATTGGATTAGTGTGGTGGAAGGA
GAACGAAGAAAAAATGTTTTCTACGGAGCCACCTTCAAGTGCTATACGAG
TTTTCAACACCCAGAGTATAGACAGGGATACTTGTCTCTTTCCGTTGACA
CTGAGGAAGACTAGTGACTCATCTATAATACTGGAAAATGGTGCAGGGAA
GTCGACAGACTATTTTTATAGTTTGTATCAGAAAGCAAAGAAAACTATAC
AAGAAAAAGAAGAACAAGTTGAAATTTCGAATGAGCTTTCATCTATACCA
TCCTTATCACCGAAGCTGGTGAAGAAAGAAACAACAACAAATCTATCGCG
CTCTACGTCTCTATCTTCAACAGAAACTGGCTCTTCAAGTCATCGATCCT
TATCTCCTCCGAAGTCTGATTCACCTCTCGTTGCAATGAATATCATTGGA
TCCGCAACTCCTAGACCATCATCACCTCCAGAGCTATCGTCAATCAACCT
CGATGACTATTCTGAAAGCAGACTCAGTGGCGATCCCAAATTCTTGGATT
TCATCAGATCCACATCAACTCTTTCAGCCAGATCTTCACCAAGGATTGAA
CAACCAACACCTCCAGATTCTCCCAGATCAGCACAAATATTCTCGTTCAA
TCCTCACAGTCCTTCCAGACTTGCTGTACTTGATAGTCCACAACACCATA
CCACTGAACCATCACAGCGTCTCAGTAGATTCGATAGTCTACACCGGCCA
ATCACTTCAACATTTCATTCTAAACAAGAGTCTACAAACGTCGATAGTCT
TCACCGTCCTCAAGAATGTTTAACAGGAAATTGTAAATACCTCTTCCCGT
CTGAACGATGCCACGTATGCAGGCCTGATGAATTCCTTTATCAGAGAGGT
AACTTCTAATGTTCAATTCTATTTTCATAAAGGCTTCATTTTCCTTTTTC
TTAACAAAAATTATTAACAATCTACTCGAAATCAAATCGAAGGCAGAACT
TCGAAATTAAGATCCAGCTCTTACTTTTACTGGTAAAAGGCACCAGTCAC
GGGGGGGGGGGGACTCAGGCAAAAATGGTGCTGGGTATGTGTGGATTGAC
GGCAAGGGTCTGTTTTTTCACCCTTCAAAGTCTCTCTAAGGGTTTCAAAA
TCGAAGAAAGGGTTACCTTTTCGGGAAAAATCAGTCTCTCTAAGGGTCTG
GTTTAGGAGGTCCAATCCGCACATACTCCTCATCCGCCAACCCTAGTACC
CAATTCAATTCAATTGATTTTATTTGAAAAGATCTCTTCTAAAATTGAAA
TGAAAATCCAGTTAATTTGCAGAGGATAGTGGTATTTAAGATTTCTAATG
ATTATTTGTTGTGTTATTTAGCTTTCTACAGCAGTGAGTTTCTACTCCGT
CAAAAAGAAAAATGGCGTCGGCCACGAACGGTTTACACTGAGAAGCAACT
GGTTTCTCTTGAAAAAGCGTACAAGAAGAACAAATATCTTCGCGGTGAAG
AAAGAAAGGCATTATGTAAAACGCTTAGCCTGGAGGAACGTCACATTAAA
GTGTGGTATCAGAATCGACGGGCTAAGGAGCGCGGACAAATTCGCCATGA
TAAATGGCTACAACGTTCCAAACGCCATCAACTCTTAATGGCTCAACAAC
AAAAACAGAAGCTGAAACAGAAAGAAAAGCAAGAAAGATTAAAACCTAAT
GACGAAGAAACTGAAGCTGGTCTAACTCAACAGGATAAATAATTTTCCAT
CCTTGGACGGCTTGTCTTACAAAGCTAATATCGTTGAATTTGAAGCTCTA
TAACAGTTAGAAATATCATTAATATTTACCAGGAAAGAAAAAGTGAATCC
TTTAGATTTGCATCGATACACGTTTTTTTTATAAGAACACCCAAAAATTT
TGAAGCCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058198TCONS_00058198Clytia hemisphaericatranscript
TCONS_00058197TCONS_00058197Clytia hemisphaericatranscript
TCONS_00058196TCONS_00058196Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058197-proteinTCONS_00058197-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_308supercontigscaffold_308:111900..115708 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22	0.3	0.39	0.39	0	0	0.03	0.21	0.05	0.03	0	0.03	0.09	0.09	0.05	0.03	2.71	3.04	0	0	4.79	4.92	2.49	3.01	5.75	4.94	0.06	0.06	0.1	0.1