XLOC_036693 (gene) - C. hemisphaerica

Overview
NameXLOC_036693
Unique NameXLOC_036693
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_309:359421..366655+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036693 ID=XLOC_036693|Name=XLOC_036693|organism=Clytia hemisphaerica|type=gene|length=7235bp|location=Sequence derived from alignment at scaffold_309:359421..366655+ (Clytia hemisphaerica)
tgttatgtttcaaaattagaataaaaaatacCTTCCGAAGAAATTAAGAG CTTGACCTTTGTTACAGTGTTAAAAAAATTGGGGATTGTTTGCATTTTTG TTGGACGAATATTTTGACATTATGACAATTGATGTAAAGGATATTCAAAT CATTAATAAAGGTAATTACAGTTTTGTTAATTTGGAAATACTAATTAATG TTAATTAATTGTGCGCTACAGTAGTCACCATTGACTTTCAAGCcggaagg gctagaggcgagactcctggatgggaaatgaaaccacttactttaggcgt acaaactttcgcgagcagaaactttcgcgaggacgaaaaatcgcgaaatt cacgacatttactttcgcgaatttaacggaaaaatattNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaatggcccttcctagaa tttttaaagacatttactttcgcgaaaagggccaaaattcgcgaaaatcg cgaaagtttctgctcgcgaaagtttctacacCTAAAGTATTTCCCATACA GAACGCTCGCGCGAAGTCTTTACAAAAACGCCGGATTAAATGTAAAATCt gtcgctagatttcaaaaaatgcactcctcaaaaacaaaggaaccgctaga tacaatccgtcgtcatgattgtagcgcgttctaggcgcgttctggatggg aaatgaccTACATGGGAGGATAGAGATTCTACTTTAGactttcgggcttt aaactctaTGGCCGTAGCACAATGATAGAAGGTCCAGCTACGGTGCACAA GTTTGTGGGTTCGACCAAACATTTAGTAAAAATGATACTCTGATGTTTCT CTGCTTGATGCTAAGGCAACTGATGGATCAAGAGAGAGATCATCAAAGAA ATGGAGCAAGGGTAAAGCGGAGAAATCCAAGGAAAGGAGTGGTGCCTTAA CCTACCTTCAGAGAAAAGAGAGCCTtataacatccaaaattttataTGCT TCAgatgttctaaacttttttactttttaagcctatgaatattcttaaga tgttcttattttcacctttttgcgAGTACTTTTGTgtgatttcctaagaa attcggtccgcgaagccttaaatattcttaacttgctcttaatattttgg ccatcagcCATCAGCCTTATGTTATATATactttgttctaataaaaacgt gtacttaTTTCGTACGGTTTGCCGAAAAAAACTTTGTTCCTTTTTTCAAA AGACTGACAGCCCGTACATCACAGTTTTTTACTACTGATAATTCAAGATT ACTTTGGGAAATTTATAAACGAAAAACAGAGTTAAGCCAGTGAGTTAAGC TCTAGCTAAGTGGTCGGCAACATCAAAGAAACTAAACGGATACTTAAAAG GCTCCTTCAAGAAGACACTTTTAGAAAATAGAATGATCTTATTTTGTAAT AAATCACAAGTAGGTTTGTTTATAACTTGAAGCCTCACTAAGTATGTGTT TACAAATTAAAATTATGTGATTTCAATGAGAATCTTATAGGTTCAGGAAA TCTCAATTTAATCCTGGACAACTGAAATCGTGCGTGTGAGAATCACACCA AAGAATAGTTGAATGGAATTGTTATGAAACAGTTTGTCAATACCACAAAT TTTGTCCATGCGTAAAGTATCCTATTTGCCAAAGTCGTATTTGAAATtat aaataaattgaaagatTCTAATTTGCAATACATCCCCGCTGGCATATAAC GTCAAATAAatgacacacaacgttatttcaacgttcatctaacgttatat agacgttgtgaacattaaaggttttgtttttacataagtgttcccgtttc atatcagacacatatttcatatcaggacagtgcctGCCTATCactgattt aaaaaattctaccgggtctgtgagaagggagtgtagTTAAATGTGTAGTA AAACCTCATTCCTACCCTAACTTTTCCTGCGTGATATCCGCGTCTCAATC CatactggcgtgccagtctaaatATGTTCTAAGCATAAAGAAAAATTCAC GCCGTTAAAGCTGGAATCTCAGGAGTATATTTTGACCATATTTTTAGATT TCCTATAGCCtagaaaacgctatattgccaaaAACCCGTGTGTCTTAGCC TactgaatacgggcttagttaactaggctttCTCTGTATGGTGAGGATGA GGAAATCGAAAATGTATAACCACTTCCAAACATATCGTCAAGCCCTCCTT TCACAGCTTCCCTTCCATTATGCGGGTTATACCACCTCTCTCGCTCTCTG CATGGCAGGATTTTCTAtattacaatcatggtcgtaatatttgagaaaaa agggaaatccaccgggaagttttgaaaccacaatcaatttgtaagtgctc taaagtaggttggaagtgtagagttttaactctgagttttaacgcgagac ttaagacttgaggatctgaggatctgaggatcctaaagttcaaaaatagt ccaataaggctcagaatatagcctggaagtctgccaacccatccccaatt gaaatattcgattaagttaaagagatagcccaaaatggactttctcgcca gaactttaaatcttgaaaaacgttaaaataaccggaattctcattctatt tcgacctTGATTGTAGCTCCTCTTTATCTTATTTTTCCTGTAGCCAAATG ATCTCAATTTAGTCTGAATAACGTCACATGACGTCACATTATGACTACGC AATCAGCGCTCCGCATAACCATAGTCCgtaaaaaccctggtctggaagct tatttttttaacttttttgttagctttttcctttgttgctatcaaaaaat aaagatcaatttgctcagtttttgatcaagTTTTTGACCAAGTAcccctc ttgggattggtttaagattcaatcacatgatcaaaaagtgagcgaaacaa acgcaagttcaagtaagaaacaatggaaagacacAAAAGGCTTCCGCAAA ccgggttttttatacggactatatGGCGTAACCGACCAATTTGACCACGT TCNGAATGGAAAGACACaaggttttttatacggactatggcgTAACCGAC CAATTTGACCACTTTCAAGCAGTACTCCTCTCCTCTTATCAGTAACATCT TCTATATAATATTTGATATTTCTCAGCAAATGCCAAACTCGTTCTCAATC CTTTAGAtcgcttttttatgattctgacaGCGCTCACGATTGTATATCAA GTTCaccagtaaaatcaaaaagtgatgCAAATGGTTCTGGGTACAAGATT GAGATCATTTTACCTATTCCTTTTTTTACTTCTAGCTATTCCACCATCGA CGCCAGGATGTCAACCCTATCACGCAACACCGCATTTCCATGGCAGCTCT AAATCTTTAAACATGATCGTAGGGTACAAAACCACACCTCAGTACCCACT ACACGCTATTGATACTCTAAGCCAAAGAGACGTACACAATCTAGTTTCAT ATACCGGCGAATTAAATTATAACACAGCGGGAACTCCACATGGCAGTAAT AAAGATATTCGAAGTCTTTATTCAACAGAAGATCACCATAATGTCAATAA AATGTATTTACCAAGTCGCCAGAATTCGATCATCTGTGCGCAGAATCCAA GATTTTCAACATACGGATATGTGAGTATTAAATACTTTCTCCAACTTCAA CATCAacgtcaactctctctaattcgaacttctgttattcgaatctttct gtaaagcgaactaaaatatttctcCCTTCAGCTTAAAAGTGGTTTAAAAT ATTCTCTGTtactcgaatctttctctaattcgaagaataCTTTTGGTCTC ATAAAGATCGAGTTATAGAGAGTAAATTGTACTATCTTTTGGGATTTTAA TCTAGAAAGAAATACTGACACAAGTCAGTCTAATCGAAAGCcaaaaatag aactttttaataCTCTTTTGATTCGTATTAAAAGCTCCATTTTAAAAAAA TCGACTAGACTGCAAGTTTCTGGAGTTTCACTGACAAGAGCAATTTCTCC GAATGAAAAAAAGTCTTCTACTATCTAATCTATCCTTTTGCCCTCCCTGT TCATATCAAGTAGACCTAATTTCAAAGTATATGTATTCCCGTACGGTAAA ACTTTATCATTTTTCCAACCTCGTTTGAATGCCTAATCCCTTTTTTTAAG GGCTAGGTGTCATGCTTTAAGCTCTTCAAAGcaacaaaaattgaatatcg caaaaactattgctgttatttttttcaaacaccCGCAAAGCTTCTTACTG GTCAAGCGCTGagattctattgtaatgtcacgtgacctaggtaggatttc ctacgaaagcacgacatctagcccttcgggctttataaatctgtggatTA GCCCTGTAGAGAATGATAAACATGACATAAACATTTAGAGATAACGCAAT ATTTTCCAAAATCCGAGACCTGGGCCAAAACtcatcaaataaataaaaac gtCGATGATGTTCGCCCTGGGATCAAGGGTGttgttttaagtcaaaatta aaattgaaagttcGACTTACCGAATCTATCTTTTATTGACGAATTTCCCC CATCTTTCTTTTCACCAACATATTTAGCCACATACGGTTGTATTGAGTCA AGGTTCATCAGAACTGGAGAAACACCAAGCAGCAGACATACCAAATTATG GAAAACTTGCCTGGTTTGCTTGCATATTCTTTTTTCCTCTTGGTTTGATT GCACTGAAGAAACATTACGAGGTAAAATGAATTTCATTCAgataactaaa gtctgtcccaATATTCCTTTCATTTTCTAATTCTAAATCTCGCTAAATCT TTTCTATCTCATAATATCCTACTCCTtactatcttttcaacaagcaaaaa atcactAATCGAATTCTATATACTATCAAAAATTACATCCTGTTCTTACT GCACTATTTGTGAGTATTGTTGGTGTTTTTTTGGTCCGCAAAGCCGAatt aatgttcttaatttgttcttaatattttagtcaacgaagccttatgttct tgtatagttttttcttacataaaaagcgtgtatataaTCTGAATATATCT GATTCCGTTACAGACACGAAAGTTTCGTTATCGGAACCCAGACAAAGCAC GAGCAGCATCAGACGTGACTCGATTCTTTGGAGCGTTTTCTATTCTTCTT GGAATTGTTCTTTACGCTCTAATTGTTGTAATTCGATTACGTTTATCTTA CGAAAATGGTGAAAAGTTCCTTTGAAAGAGATTATTAACTGAAGAAGCAT TTTAGCTTTAAGGAGAAGCTGTGAACTGGTGAAATATTCAATGCTGTTAA CAGCAATTCATGAAATGACTTCCCAGCTGggacacaacgttgttttaacg ttcaaataactttatttggacgttattaatgtcacatggacgttgctttg acgttgtgtgccgtctgggttAGTAGTAGGTCTAATAACAATCTGATTGA CctgacaaaataatttttgtgaGAGCTATCAGATTCATCACAAAACGAGC TCAGGNCGACCTGACAAAATAACTTTTGTGAGAGCTATCAGATTCATCAC GAAACGAGCTCAGGGACTGGGTATGAATTTGTTTTAATGCTAAGAGATTA TCGAATCATTGGTCCCCAaaaagaagaacatcaaaaaggACATCAATATG ACCTCCATAACGTTGTCAGTCAACTGGGAAAGGATTTAGATACAAAGGAC AAGGGGTATGGAAGCTCGAAGAAATCTAAGATTCTTAATaacgaaaattt tctttgttgtaAATGAAATGGTGAAAATTAGAGAGGAATCATACGGATGA GAAATGTAAACGGATACGGATGTAAACGTTAATCGTTTTTTGCTATTTCA GATAATTTATACAGTGTTGGAAATGTGCTTAACGGTAAACACACGTTATT AACATTACCGTTGAGAATTGTTTGctggtcatcaaaatacataatcttat aatattttaaatcatttaccttatcggccaactTAAGTCAGCCCTacgtt tatgtttcttttctttaaagttgatgcaaagtagtacaatgtgtacttag ctcgaggctaatcaatatcaactttTAATTACAAATCTATCTAAAAGGTT GATACTCAAGATCAActattatttacaaattaatttaaattcaatcaatG AAACCAACGCCATGGATAAAAGTACGACAGTTTCGGCAAGGACAAGTAGT GGGCCCCCATTGCTTGATTTCTTATTTAAATTCATCTAggcttttaagtt ttttaaagttatCGGGAAGGGTAGCCCAGATTTTAGGTCCCAGGAAAGCT AAATACGATTTCCATTCATTTCACTTTCAACTACTCTACTACGAAAGGAA TTCCTTTTTCTCGTTTTGATCTTACATtggtttttgagaaatattttact ttctgattcattgagttttgatttaaatagctCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058228TCONS_00058228Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058228-proteinTCONS_00058228-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:359421..366655 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 1.22 1.18 0.39 0.37 0.37 1.19 0.64 0.77 6.05 4.89 5.32 9.07 4.09 6.12 3.29 3.6 4.72 3.88 1.57 2.33 1.78 1.76 0 0.15 2.71 2.85