XLOC_036729 (gene) - C. hemisphaerica

Overview
NameXLOC_036729
Unique NameXLOC_036729
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_309:784760..794857-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036729 ID=XLOC_036729|Name=XLOC_036729|organism=Clytia hemisphaerica|type=gene|length=10098bp|location=Sequence derived from alignment at scaffold_309:784760..794857- (Clytia hemisphaerica)
CACTCATCGTGTTTTACACGTGGATGGAGCCAGATGAAGCAGGAACACTC
AGAGCTTTTTAGAGGGTCATAAAATTGTTGGTCCCAAACTCCAGAAAACA
AAGGCAGGTATACAATTTTGATAGGTTTCTACTCTTTAGCTATGATGTAC
TAGGGCACACTGAATCTTATGTTATGGCATGTCCAAAAAGGACATAAGGT
TGAGTGTGGTTGGCACAGAGGGCCTTTCACACATGCCATCCATTATGTGA
CATGGCATATAATGGGGTCTTTTATATATGTTATATGCCAGACCCGATCA
ATAGAACTTGTCGAACCAATCGAACAACCGAACTAATCGAACTCCATCGA
ACGATTAAAGTTTGATTAAAATAATTAATCGAACCTAATTAATCGAACAC
TCACAATTTTTGAAGCAATAGCAGTTCGATATAGTTCTCAGTCAGTAAAA
ACTTCGATTAGTTCGATTATATTAAATCCTCATATCTTCCCTTGCTTGCA
AAAACTTTAACCTTGCAAGCGATTGCCATTCCGACAATTCCCGGACTTAA
CAGCTTAACGTTTATTGTACCCGGATATTTGTCTATCCAGAACAAAGTCC
GTAGCCCCTCTGTTGCGATTTCACGCGCGGCTGAGTGGCGGAATACTACG
CCCTAACAAACCGCTTCTGGCGCTAAAAGGATACAGGAAAAGTGTGTAAT
CTGTTATCGGAAGTAATTTCCCGATTTACATTCCGAATTTGGCTTTGAAA
AGAAGCTAATATACGGTGTGGCGGAGCAGCACAAACTTGTCAAAAAAAAT
TGGTTTATCGAACTGATCGAACCAAAACCCATTGATCGAACTTAATCGAA
CACTCACAATCTTTTAAAAAATCTTAGAGTTCGATTAAATTTTTTAATTG
AACTTTTATCGTTCGATGGAGTTCGATTAGTTAGATTGTTCGATTGGTTT
GACAAGTTCGATTTGTTCAGTGTTGCTCGAATCCTTCAGATCCTTGGTTA
GAAAAAGCTATACCTGTTTACTTTTTTCTTGCCAGATTCAACAAGCCATC
AACCAACAAAATTAATACTGACATCAAAAAATTCACACGACCTTTCCACT
AGACACTTCTAAATTATCTGCCATTATTAAGATGTTCCGAAATAACCAAT
CTGGGACTTAGCGAGTCGGGAAATGTAAAGTTACGTAAAAGGTAATACAT
AATTTTTCCGGGGGTGAAACGTATAAAAAAATTGAAATGGTTTCTTTTTT
TCTTCATTATATATTTAAATTTCCATTATCAAAATTCTAAAAATGCTAAT
TTGTAGACCATATTAGAAAATGGGTATATATTTCGCAAAATAAACACTTA
CAAAAGCTATTACTTACTAATTTTACCCCCACTTTTTAAACAGCGTCTTC
TGTGGGCGTGATATCAGGTGGAGAGAAAACGCCCTCATCTTTATTGTTTG
TTCCATTTGTCGAGTCTGTCGCAGGGTTCGAATTATAGCTTCGCACTTCG
CAAAATGCGAAGTGAATTTTAGATTTAGCGACCCAAAAAGATTTCCCAAC
TCAAAAATGCGAAGTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTTT
ATCCATTGCTTTATCTAAAACTCGTTACTTCAAAACTTCACTATACTTTG
CTTTGTCTATAATCTCTTACTTCAAATCTAACTTCGCTTTTCTCGAGAAA
TAAATTGAAGATACTTTCGCATCTTCTTCCAAACAACATCGCAAAATACT
AAAAATGTTTCGCAAACAGTGGAAAAATTTTGCCTGCGGCGCTCCTCTGT
TACCTCGCTTCGCTCGGAAAAATAGCGAAGCTCCTAAAATTTATAATTCG
AACCCTGTGTCGGTCCTATTGTTCATGCTAAATCCATACACGATGACCTC
AATGTTTGGCGGCATACCTGAAAATAAAAACAAAAAGATGATCATTATTT
TTGCATGAATTACGCTACCTTATACCATGAGTGGTCCTAAATCCGACAGC
CCTGCCTAAATCCGACAGGGTCTTTCAAAGATACAAACTAAAATAAAAAC
AAACCTTTCGCTGTGACGCAATGAAGATACCAAAGTCTCCACTAAACTGA
GAGATTTGATACACTGAACCAATTGAACCAAATTACAATACTGTAATTGC
TTCTTATACAAAACATAATTTTTCATAACATAAATTGCCAATGTTTTAAA
TCAAACCCTGTTTAAACATGAGTAACGGATTTAGAATAATAGAGGTAATT
ATTTTTAAAACTCACACTTTTTTTATCACATTAATCGACATCTTGACATT
AAAGTTAATATTATTAGATGTTTTGTTTTGAGAGTCCTTGCAATAGTTTA
TTGTTGAACTTGGAGAGGGAATGTTTGTAAACATAGAATTTTTTTCATAG
CAGTTATTTGAGGGGTCGGATTTAGGCAAGACTGTCGGATTTAGGACCAT
TCACGGTACGTCATTATAAAATTATACAAAACAAAAGTGAGTTTAGGCCG
CCCGCCTAGAGAGCGCGGGCCCTAATATTTTTTCTCTCGTGGTCTTCAGG
GGAAAACAAAAGTGATCGATATTCTTCGAAGGAAGAACTTGCCAAAAAAA
AAACCCTATACAAAAAGATGTATTTTGAGGTTGGGAATGGATCCTGCGAG
GATGAAAAAATTTTGACTAGGCGTTTTTTTGGCAAACCCAAAAACTCTAA
TTTTTTTCTTCCCTTGAGCTAAAAAGGTTACGGGTTTTGGGCAATCGAGG
CAAAAATTAGCAAAAAGCTGGTGTTTTCCGTAAATCTGAGAATCGCGATA
ATATCCTCACTCATTTTAGCCAAGGTTCTAACCGTCAGTCAGGGAAATCC
CTCAATTACGGTATACTGCAATTACAGTAGTTTTCATTCGTGGTTAGCCT
GCAAAGGCTTATAACGGCTACATGTAGTGCTGGTCCGTCGACAAAGATAA
ACAAACATCGACTGTAAAAAATCGCACAAGAAGAAAGCTTTTCTTTATTA
AAAGAATCTGATCTATGGAAAAAATATTTTGTCTGTGCGTTAAAAAGATA
TGATCAATTATGTACAAAAATTGCCTGTTTTCTCCTTGAATCTTGAATTT
TGTTTTATGATGAATATACTGCAATTGCGGTATATAAAAAATGTAAAAGT
GACAATTACACCGCAATTACAGTAAAAAATTACTACCGCAATTGAGGGAT
TTCCCTGACTGACCGTAAGTTGGTCTAATTAATGTCAACATCCTTCTCCT
AATTTCAACATCCTTCTTTAAATAAAGATACCGTCAACTACTCTAACTTG
GGGGACGATTTGTCGAAACATGGGCAGGCTACTGTGAGATCGGGTAACTT
GCATCNTTGGTCGAAACATGGGCAGGCTACTGTGAGATCAGGTAACTTGC
ATCAGCGGAGGCTAACATGCATAGCCCTCAAATGAAAGACCTGGCTGGTC
ATTAAAATACAAACTCAAATCAAAACAAAAATGGTAGAGTAGAGCTGCGA
GCGGAGCTGCGTAGTTGTATTTCAATGACCAGACAGGTCATTCATTTTAG
GGCTATGCATGTTTGCTACCACTGATGCAAGTTACCCGATCTCACGGTAG
CTCTTATAAGCTTTAAAACAGCATCTAATAACATGAAAACCAGAATATGA
TTCTTCAATGGGAATCAAAAATATAAAGTGCACTTACAAACATCAATTTG
TCTGACAGTTAGTGGAATTACCTCGATTTTAAGCATGTTCAAAGTTCACA
ATAACGACTTTCTTTTTATTACAGAAACCAAACGAGTGAGAACAAGTCAT
AAAACTAAAAGTCAACGCTCTTAGCTAGTCGCGCTGATGATATCGAAAAA
AGTGGCTAGAAAACTATTTTCGTGATACATCTCTGAGATATAATTTTTTT
TGATGGACACTCGCGAATTTGTATGCGTAGATTCCAAAATCAAAAAGTTT
GCACGATGTTACGAGTAAATCGACTTAAAAGTTGACTTCAATCTGCTTCA
ATCGATTTGGTCGATTTTGATTGATTTTAACAAATTTAGCAGTTTCTAGC
AGTTTCTAGATCATGAATTTTCACTTTTATGACATTTTTTGCTTGTAAAT
ACTCAAACTCATCAAATACACCGTTTAGTAGCGTCGACTGCGCACACGTC
CAAACAATTTTCCATTGTTTTGATTTTAGCAATCGCGGGAAACTACGGGG
AGAGCGTAAAAAACGGTAGATAAAAATTTGGTTTCTATAAGAAAACCCAG
CCAGAAAAACAGTAGGTAAAAAACTCCTTTTAATCATAACTTCTTTTCCT
CTTGATGAATTTTGTGAAATTTTCAGGAGAGATCCATAAAATTATCATTG
ATATCATGTTCAAATATCTTAATCATTATCTTTAAAGGAAAGAAAAAAAT
TGATAATGTTTACATTCCTCTAACCCTTCACAGTACTAAAGTGCGTATTT
TTACCTACATGAAAATACCTCTGGAATTTGAAAGAAAAAGATCTATTGGT
CGTGCTTTTCTGTATGTTTCTCTCCAAAAAGGGACTTGATCTACGTTTTC
ACAGTGGAACACGGTTGAGAAAGTGAGACTCCTAAACGGTGTATTATTCC
ACAAACAATTGATATAAGCGAAGAAAATATAGAAAAGTGGCTAAAATGGA
TAAAATTATCGATGAATATTGAATGCATAATCTGTTTACCCGATAGACTT
CGATTCAGTCTGTAGACTTAAAAAATGGTCAGATTTGGCTAAAATTTTGC
ACATACGTCCCTAAGGTTAATATCTTTTGATTTAATTTTTAATTTTTTCA
AAGAAAATCGATTTTGGGGGTCTGGGGACAAGTATAATGGTAAACTGAGG
CTGAGACTTCAGGAAAGTATGTAGGCTTAAAAAACACTTGGACGGGATTT
TTGTGCATACTTAATTTTGTTAGTTTTTAGGCAAAATGTTGCAAAATTTT
GCACCTTATATGCTAAGTTACAAGCAACATGTCTTTCGTTTTTTCAAACC
TTTTCTTTCAGAATATCCAATTTAGTGAATAGCAAAATTAAATACAGGCA
TAAAATACCCTCAGCATTGAGTTCTTGGTGATTTTCTGACTCAACATTGA
TAGTGGGATCCAGAGGACAGATTTTTTTAGCTCTTGACAGCTGCCAACTT
TCAGTTTTAAACATCATTTTACTTTGAAAGCAATGTTTTCTTTACAAAAA
GGCAAAGTTTTTTACTTCATGTTGTCTTGTATGTAATAGATTTCACTAGT
TTTTCTTTTTTTAAATGTTGCATTGCCACAATTTGTTGTTAAGTCAACCT
GAGTCAACCTTAATTTCATTTACTTGTTAAATAAAAACTTTAATGAAGCG
TGGAAAAACACAAACTCAGATATTTAACAAATTAGAATTGTAATCATACC
GTTTAGTAGAGGCCCACCTCGGGCCTGTGAGCTTGTATACTTTATAATAA
TAATAACAATAATAATAAATGTTGCAATTTTTTTAGCCCTCAAAATAAAA
AAAAATGTTTTCAAGAACAGCCAGACAGTTATCCAAACAAACATGTACCA
TCAGAAATGCAAGATTCAACTCTTCAAGCACAAGGGTAATAAACAGTTTT
ATGCAATGTAAACCACATTATTACGAATTAGAATCACACATTTTAAAAAT
ATCTTGTGTTTTGCTCTTTTTCCTAACAAACAGCTATACTTCAGATAAAA
ATCAATTTCTAAACGTAATATCTAAAAGTAAATGCTCTATAGAAAAGAAA
TTACCTGATCACAGTCAAATTAATCCTTGAATTCGTTTTGACTTTTCAGA
AAACAACACAATTGAAGAACATGTTGCAATCGAATGAATTGGAATTTTTG
ATGGAAGCCCACAGTGGTTTATCTGCTAAGATTGTTGAGGAAGCAGGTAA
TGCAAGAAATCAAAAAAGTGAATGAACTAGAAAGAACAAACTCAAACAAT
AAATGAAATAATTTTAAAAAGAACATGATAAGAAGTCAATTTCACAAACC
CCTTCTCTACTTCTGTATTTTAGGTTTTAAAGGTATTTGGGGCAGTGGCT
TATCTATTTCTGCTTCACTTGGTGTAAGAGACAGTAACGAGGCCTCATGG
ACACAAGTATTGGATGTTTGTGAATATATGAGCGATGCTTCTACTCTACC
CATTTTGTTGGATGCAGACACTGGTTATGGAAATTTCAACAATGCCAGAA
GGCTTGTCAAGAAATTGGAAGAAAGGGGCGTTGCTGGGGCTTGCATGGAA
GATAAACTTTTCCCTAAGACCAACTCTCTCCTTGATGGCAGAGCACAGCC
TTTGGCTGATGTTGAAGAATTTGCTTTGAAAATCAAAGCTTGCAAAGGTC
ACTATTTTTCTCTCCTTATGAAAAAAACAATATTTTAAGGTTTCCTTAGG
TTAGAGAAAAGGGTTGATAGGGACCTATGCAGAACAACACAGAAAGTATT
GGCTATTCCAAATAAGTAGAAAGTGAGAACTAACTTTTTATCTAATGTTG
CCATAGTGATGTACAGCTCATATTAACAAAATCGCTAGGAGATTCTGCAT
AAGAAAGTATATTTACCCCCTAAAGTTTGCATTAAAAAAAAACTAAAACA
AAATAATTAGTCACACAACACTAATTGTGCAGATTTTTTAAATGTTTCAA
CAGTAGAAATCTATTAATTTGTAACATAGTTAACGACACAAGACCTAGTA
TATGACGAGCTGTATCTAAAGGGAAGAAATTTTTGCAATATTTAATTTCG
CGTTTTTTTGACAAATCCGTGAAATCAAATTTAGCGAAACACGAATATTC
TCAGGATTTAAAAATTCACCTCTAAAATTGGTCATTTTAGGGCAAAATAG
GCCATTTTGTAAACAAAAAAGTCCCTCAACTGCAAAATTGAAATTCCGGA
AATTCCGAATTCCGATTTGTGAACCGCATAATTAAATTGTGTGAAAATAT
CTTCCTGCAAAAATTTCTTCCCTTAAAAGGTAATTCTATTGTTTTTAAAA
CAATGTTTTTCTATCTAGCAAACTCTTGGTTATTCCTTTTGGGATTGTTT
ATTTTAGTTTTTCTTTTTGATTTCAGATACTCAAAGAGATCCAGACTTTT
GCATTGTTGCACGCGTAGAGGCTTTCATTGCTGGATGGGGCTTGGAAGAA
GCATTGAAAAGATCACACGCTTATGCTGATGCTGGGGCTGATGCTATCTT
GATGCACAGCAAGCTGAAAGAACCCTCTGAAATCAAAGCTTTCCTTGATG
CATGGGATAATAAAGTAAGTACACGTTTTTTCTTATAAGAACAAACTATA
TAAGAACATAAGGCTTCGATGGCCAAAATCCTAAGAGCAAGTTAGCTTTG
CGGACGCTAAATTTTTTAGAAAAATGGACCAAAATACTCACAAAAAGTTA
AGAGCGTAATGCTTTGGCCAAAATATCAAGATACCAAATTAAGAACATTC
TGATAGGTGAAATTAAGAACATCTTAAGAACATCTTTAGGCTTAAAACTC
GAAAAGTTAAGAACATCTGAGGGCTTTAAAAAATTTGGACGTTCTTATAT
AAAAAAACGTGTACCACAGATCCTCATTCATTATTGGGTCAGCTTGCCTG
ACCTGAAAGTATAGCTTTTAATTTAAAGGTTTTCTTTTTAGATAAGTGTT
CCCGTTTCATATCAGACAGGACTGCAGTGTCTTGCTATTGTTATGTTATG
CTGATATAACCATAAATTTTTTTTTCTTTTCCTCTTTCTGAGAATTCTTG
CTCCACATCTGTGTCAATCCAATGTGAAAAAGTTTGTGAATTGAAATTGA
TGAGTAAGCAAACGATATCACTCTTATTTAAAAACAAAACCTTTAAGATA
AATGGATCTTCTGGAAAGCTCGTTAAATATTGAGAAATTGTATATTGTGA
AATGAGTTGTCAGTTTCCCTCCATTTGTCTCTTATTAAAGGAATTTTAAG
CTTTCTGCCAATCTGCATTTTTAATCTGAAAGAAAAATACCAATGAAAAA
ATTCTCACAAAGCTGTCCAATAGCTTATTAATTTAAATGGGCGTAATTTT
TCAGGAGGACTCGACTGGGTGACTGGGTGACCCACGAGAAGCTTTGCGGA
CAGTTTTATTTACCTTTTATTTCGAGTAAAAAACGTTGTTCAACTTTGCC
CTTTAGATTCCTGTAGTGATCGTACCCACAAATTATTACACAACCCCAAC
AAACGAATTCCGTGACTGGGGCGTTTCCACCGTGATCTGGGCCAACCACA
ACGTGAGAGCCAGCATCGATGCCATCCAAAAAACAACCAATACTATCTTC
AAAGAACAATCTTTAGAAAGCATCGAACCCAATGTAAGCAACTTCTTCAA
TTCCATTTGAATTGATTTCCTGTCGATTCCACTCATAAATATCCAATAGT
CCAACAAACAAAATCAAAATGAAATTTACAAAGTTTTATGTTTCAAAAAT
ATGAACGATTTATAATGCTACGTTATCGTATTAAAGATCTCACTATTTCT
TTCCTGGGAAAGAATGGAGATTCAATTCTAGCCCTTTCGGGGCTTTACAT
CCAATGGGGTGAACCCCAATGAAGTTTAAGCCCGACGGGCTAGAAGCGAA
TATCCTTGATAGTATTTGAAGCCAATAAATCCTACTAAAGTCGCGCGGCC
TAGCGCAGCCCGCCTAGTTTTTGCACAAATGCCAGATTTAAACTAAAATT
TACCACTAAATTTTGAGAAAAATATCACTCGAAAACAAAGGAATTACGAA
CTAAAGTCTGTCCAGATATAATTGGCAGTGGAAACAAGAATGCCTGTAAC
TTTTGATAGTCAAATATAATTATGGAAATAATAACCCCCATTTTTAGTAA
TAAGTTGGAGATTTGATATTTCACAGAAAAGTGCTACCAAGGGATATTTC
GGGTCCCATATCTTCCGAAGGACTTTTCTGTTTGCCTTGAAATTTAACAA
ACTTCTTAACCTAAGGTTGAACTACCACTGGTGTAAAAATGTTAAAACGT
TATAGCATAAGTAGAAAAAAAGCTCAATTTTTACAATCGCAAATTTAACC
GCTAAAAATCGCGAATTTTTCAACCAAAAATACATTCAAATATAGCGCTT
TTGATTCTCTAAAACAAACAAAAAAAATTTCCATAATTATAATATTTGAC
TATCAAAAGTTGCAAGCATTTTTGTTTCCACTGCCAATTATATCTGGACA
GACTTTAGATTCAATCTGTCGTCAAAAATACGACGCATAATTTAAGGCTT
TACTTGCCCTTGCCTGTGAAAGGTAAAAGATTCGCTTCTAGCCCTTCGGG
CTTATACCTCATTGGTGATACCTCATTGGTGAACCCATGCCACTCTAATT
CCATTGTTTTGCGTCCATTTCAGGTGGTGACAGTGAAGGAAATCTTCCGT
CTTCAAAACGATACCGAGTTAGTTGAAGCTGAAAAAGTCTACCTCCCACA
AAACTAGACATTAACCCTTTTAATTTTCTTTTCATTTTATGGGTGTATCA
TTTTTTTTTACTTAAATTTTCAAGGGACTTTGTAACTTTTTTATATTTAT
ATATAGGGGGTGTGGGGCTAGGATTACATATTTATATATACGGACTTATT
TCGTTGTTTTTGTTTTGTTTTCTGATGACTGTTGTAGACTATTTGGGATT
TATTGACTCTTACCATGCAGAATATATTTAAATGAGTGACTCGCAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058313TCONS_00058313Clytia hemisphaericatranscript
TCONS_00058312TCONS_00058312Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058313-proteinTCONS_00058313-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:784760..794857 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
474.36	475.6	234.69	199.86	66.55	55.68	149.39	156.81	235.73	288.1	166.19	250.25	235.93	238.01	256.01	277.22	262.24	254.58	83.5	116.63	199.67	216.55	258.96	231.57	76.22	85.55	616.04	532.83	105.84	115.48