XLOC_036785 (gene) - C. hemisphaerica

Overview
NameXLOC_036785
Unique NameXLOC_036785
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_310:147049..150328+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036785 ID=XLOC_036785|Name=XLOC_036785|organism=Clytia hemisphaerica|type=gene|length=3280bp|location=Sequence derived from alignment at scaffold_310:147049..150328+ (Clytia hemisphaerica)
tgtacgCCTTAAGGATGCAATTTTAATGCACAATAATTGAATGTTCCTAG
TACTTGACATTCCTAGTATTTCTTTTTAGCTATGTTATCAAAACAACCTA
ATGTAAATGAAATTTGGTTTTCAGATTTCATATAATCCTCCCTGCATAAA
TAAGCTAACACTTTGAGATAAACTTTTTTACCCCCACTTTAACTCCTACT
TTTATAAACCATTTCGACTTTGGACCTTTGGAATTAATATATAATGAATG
TCAAGTCCTAGtgtacattttcaatttttgtagtAAAGCATTAGCTATTA
AAAttcattcgctttaagtgtgcactgatctttgttttcccTGCCATTTT
TCGACCGTTACTAGAACACTatattttctaagaaaaataattcgaaaaat
ttagaaaatgaagaagaattaCTTCAAAGCCTCCTGATTTCAGAGGTACA
ATTATTTTGGCATAGCTGAAATTAAAAGGCTTTTAAGTatctttgtacca
aaaattaGGTTTTTAGCACTTAATGACAAGAAAACTAAGATTAGTGCTCA
CATAAGGGAAAGGACATTAGTAATAAACAAAGCAGCAATCCAAAATTGGA
CATGACTTCATGGCTTATTGAAACGAATATTGGTAGAAAAGATCGCAATA
AGACGATAAATATAAATTATCTTGATGTTGACTGGCCACTTATATCGCAA
TAAGACGATGCTTATCAAATTACAGCTAGCTGGAGTCGGGACGGATGGCA
GACTACATCGCAATAAGAGGATAGATATAAAAGTATATGTTGCCATACTA
TAAATCGCAATAAGACGATACGTATTAAAAATAAACTGCCAGCTAGCCGG
AGTTGGACATCACCAAATGCTAAAGTCTGAACATGGGTGGTAGGGAGGCA
GACTATAAATCGCAATAAGACGATTGATTTTAAATTATCTGTATGTTGGC
AGACCATACATCGCAATAAGACGATACATATTAAAAGTGACAGCTAGACG
GATTCGGACATCAAATTTTGGATACCATCCCTCTATTTGACttcaggttt
aaaaaagtagTTGTAAGAAGTAAGAAACGGTAACTCTTAGTTATTAcatg
ttttacttttttccgTATATCCTTAAATTTTCtcgcaaaataaaaaacaa
atgcaaTAAATGTCACTGGTTTAAGGTCGTTGCAGTTTCTAATCTTTCTT
TGAACCCACTTTCCTTTGAGATTATATATTACGTTTTAAAAGTTAGCCTG
ATTTCtgctttgtttttttctgattcaaTTAGATTCAATATGATGTCCTG
AGAAAATCGAAACTGTTTCATCTGNCTgctttgttttttctgattcaaTT
AGATTCAATATGATGGCCGGAGAAAATCGAAACTGTTTCATCGACAACCA
ACGATTGCACCCAAGAATTATGAAATAGGTAATCCCTTGATATTGTTTGT
AATCTTTTCTACAGTTCCTTACCCTGAtgtttcatattttgaaaactatt
cagtttaaaaatctatttttttcattattcagGTGACTGGTATCGGAGAA
TTTAAAAGACAAGACAAGTATATGTAGTGCAGTTTATAAGCATTTCAATT
TATTAGCTAAGAAtagtttgatttcattttttctaataAAGTTCCACCTG
ATATGTATTACTTGTTATCTTCGATATTCCCGGGAAATAGATATCTATCT
TATCTTTCAAACAGAATGTTTCATTgagttttctgttttctatactattt
aaaaaaactgatttaTTATTGAGACCATCATTTTAATAGAGACTATTACT
TTTTTTAACTGTTCCGAAAATGTCGAAAGATTTACTTTATTTAAAGAGTA
AATTACGCTGGCGGATACAATACAGGCCAATATATCTAATCTTAATATAA
TGCTAAAACTCAGCATATGTGTTATTGGAGCTGATTTGAGTAGACGTTGG
ACGTGTAGGAAGTCAGAAGCAACTTACAGATTCACTCCCAGCTTTATAAT
AAAAGAAgttctgttttcttttcttttttcagatctAATATATTTGTATA
TAACAGTAAAAGATGTCAACGCCACAGGTTACCGACCTTCAGATGCTGTC
TCTCATTTCGCAGTTGCAGACAATAATCAACGGTGGTATATAAATATTCT
ATATTCGGTTGATTTGTCAGCAATATTCATATATAGGCGCTGCCACCCAA
ATCTGGGTGAATATAGTtagacagaaattcttatttgttCAAATATATAT
CAAAGGTTGTGTTTGATGCTAACAGTTCATGAATTTTTATTAAGATTTTC
GAACTTCATAATATCCCCTACTGATATTGAATTATTGCCTTGACGTTTTC
ATTCTACTNTCTTAATATCCCCTACTGATATTGAATTATTCCCTTGACGT
TTTCATTCTACTTATTGTCCTCCCTTCTCACCAATATCGTTTGACATATT
ACTCAAACCCAACAatgcattgataatacaaaaattACCCAGAGGGATCA
TCAGCTTTTCGGCTATTACTGAAAATGATTCCTTTTTATATTCTTTAGCT
GCCGAACAGTTAAACATGCTGCAGAGCAGGATCTCTGGATTTGGTAGGTG
TATTCAATTATAACTGGAAATCTTTAGGATTGTACATTGTTATATGTTTG
TTATTACTTTTAATAATTGCGATCGCCCAAATCTAATTGAACATACATAC
CGTCGTTTAAGGTTACTTTGATAAGTGAGGAAGACTTTGTAGATTACCCA
ACAcatatgaaaaagaaaacagaaattgtaagttttttaatcttttttca
gaTGGGACTGGAAAATCACTGGATTCAATTCCACCGGGCGTTCCTGTCAG
TCAAATCAGTAAGTGAATCTCTTacctttaaatttgaaaatacaaTTATG
TAAGTgtgatttgaaaatgtttttgataaatcACCCAAAACCAATTTTAT
CAATCCTGTTATCGAATTTATATGCACTTATGACTCCATTTATCTGATCA
TACAGGTCACAAacgatttgtttattttggttgttttcaagACATATTAC
TTATGTTTCTTTCATTGTTTCATACATTACCCCTTTAAATTTGTCTTTTC
AGCTTTCGTTCGACAACTATTTGTCCACCGGGCACAATCCGTGGCCAACG
CCGACACCAGCGATGCCGGCCTTGGCTATTGGGTCAACGCCGATGGGATG
TTGCCCTCACGTCCAAAACCCGAAAGACGGTTTTACAACAACTATCGTGG
GCGTGGGCGTGGCAGTCGTGGTGATGGGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058395TCONS_00058395Clytia hemisphaericatranscript
TCONS_00058396TCONS_00058396Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058395-proteinTCONS_00058395-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_310supercontigscaffold_310:147049..150328 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.85	3.52	1.41	1.38	2.72	2.19	3.33	4.58	3.63	3.1	5.91	3.97	5.34	5.38	3.11	3.63	3.12	4.35	4.18	2.76	5.76	5.54	2.81	3.66	8.66	8.16	2.22	1.37	0.7	0.51