XLOC_036806 (gene) - C. hemisphaerica

Overview
NameXLOC_036806
Unique NameXLOC_036806
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:9016..20677+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036806 ID=XLOC_036806|Name=XLOC_036806|organism=Clytia hemisphaerica|type=gene|length=11662bp|location=Sequence derived from alignment at scaffold_311:9016..20677+ (Clytia hemisphaerica)
attttttatcttttctatttttgtaccctgcttttttttttttaatgata
acCATCAATAGATtctcattttggaaaaaatcagtCCTCTAGATTAGAAT
TTTTAGTGACATAAATTACAGTAACAATTGACATCTAATTTTTGATTGCT
ATTCTTGATTCATTTCTAGTGttattcaataaaaataattcaaaaataaa
aaatgggaaaatcAAAGAAAGGTATCTATTTTGTTTAACttttattcaac
tttttcaacaaCATTTCTTTGCTTCtatttttttatccaacacCGCTGCT
TATTTTGCAAACCATTTCTTTTATTACagtattataatttttttgttccc
TTCCCAAAGGTCAGCAAAGTTAAAACTCAAGGTTCCAGAAAACTGACCGA
GATTATTTTtccatagcttcagccaggtttctaggtccccccaacaaagt
aaggtccccccaataatttacctccccccaaaaaattgccttgtgctagg
tccccttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGG
GGGGGCTGATGCTATGTtttcccagaaaaaaaattatgtttttgataact
tttaatTGTGACATGGCGTGatgtttttgaaatataacaagcaagaattc
tgaaaatgaaaaaatggctgGTTACCCCTTGTGTACCATATATACCATTT
AGGTTATAGAGTTTAGgacatgtttatttttattttcaattttgaattct
tcACAGCACAAGATGGAGTCAGCAAATTTGAGGGATTTGGAGTTGATTTC
AAATGTAAAGTATGTGGAAAAGTTTTTGTATTGAATTTGACGAATTAATT
TTTCTGTCCTAGAAAAATTGGACTGATTCTTAATAAAAAAGTAGAATCTA
CAAACCAAGAGTTCAATAAAAAAGAGTTTTAACAATGAGTTTTCATgttc
aatcaaaagataaatTTAAGATTCCAAAGTACtggtatgttttttttgta
caaaatgtTAAGCAAATAGATCAAAAAAATCAAGTCTACATAAATCATAG
AggatttgttatttttattattatgttCTCACTCTTTTGGGACGCACTAT
TCTATAGTAAAAAGAAATCAGACAAGCACTTTTAACATTATCaaaatttg
ttactttttttcgttttttccaGTTAATTGGCTGCACAGATGTTCCTGCA
GCAAGGGGAGATGATATCTGCCAATCTGCAATGACCAAACTGAAGGTATT
CACTGCTTGAGTATAAACAAtttggaaatttctttttattcatagaatta
tattccacaggtctatcgacctctacgaaataatttacatttataaatat
tgtctaattcttcatctgtcgtccagtcgtcagaagatatggacagagaa
gacgttgttttggtctttgtcctaggttttcgaaataggcgaaggtttgt
tctagtgcttcctcttacatgccaaacgaaatTATCATTTTCTACATTCA
TTTTCTTTgccttttggcacatatctttaataatttttctttcgttgatg
gtgaagtcgtctgtaatgctaaagccaccaatttcgttgaatcgtttcag
cttatgcagattttgcattatccgttTTTTTTCCTCcatactttttaaga
tcaacttgattggacgccaGTTGTAGCcctttttctgttttgtccaatgc
gatgGTGGGACAGTTTGATATCTTGGACGCCAATGTTATctagtatacct
tcaatatctattttgtctttttcctGTTGTTCCTCTTTCTTATGTACCTC
TAATTCCACCATTCCATGTATAATGATgtttcgttttcttgattcgatgt
ctctttcttcattcttattttcttgttggtgttctctcactactgatttg
aaattatccttgtttttcttagttatttcaacagcgtatgttttttctga
tgttttttctatgtatttCGTCGTtagctttatttcttcttttataatct
gcttgctttttatttcaaagtcagccatcttattggttaagatgCTTTCG
ATATCGTTCTTAAGGCTGCGGCTCCTGGCTAGCTGGTTTTCGAGCTTTTT
AATGATGTCGTCCTTCTTCTCAATCTCCTTCTGCATCATATGATACGAGT
TCTCACctattttactcattagagatcGTGTTATCCGCACGCAATTCTGA
CATAGATATTATTTGTTATAagtgttggcaaaaatttgcagctgGTAAAG
CGGTAATTATGTGCACTTGTTGTGTACCATGCGGTGACAGTTTCAgcatt
ttagacggttttggtCATCGTCATCTGAGCAGGAGGGAGAGTacatgttt
ggttttgtttacagtagcttcttcaaatggttgtttttcttgctttttgt
cagttttttcgttcatgttttttcttcaatgtgtcctttttcaaaaaagt
atacttttgaaatacagtgtgtctctttaatttgattttcaaggggaatc
gtATTTTTTCGAATAGTTACGTAACGAAAAGGAATGGGATCAACAGAATT
CTAACCacacaaatgttttttttctacaaGTTTGATTGATTAGCAACATG
GTTCAATTTATTTTAGATGATTGCAGTACAGAAAAACAAAGAGAAGAAag
aacataaacaaaaaatcaCCGTCAATATTACTCTGAAAGGAATACGTATT
CTAGATGAAACTACTGAGGTTTGTGTTATATGTTTGTGTTACtttaaggg
gattaattttcagggggattaaatttcgttgTTGAGCtaattcattaaat
ttcaaGATTTCGCAGGAACTTAATTCACGTAAAATTTCAAGATTGCGCAG
GAACTTAATTTcctgggacaagctggagtttttacaagctcttatttgat
ttgattggtcgttaagatgtaataaaagaatttattactttttctaaaga
acacgtcATCTCTACCACTTTAAATGACTAGAGAcattattttcatgatt
ttgtgtctttttggacctacctccgggtgccccggtggaggtcctatgaa
ttaacctctgtctgttcgtccgtccgtccgtccgtccgtccgtccgtccg
tccgtcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNtccgtccgtccgtccgtccgttcgtctgttaccagcttttctc
gagattggctcattagttttttctgattttttgcacaaagatgcaaaatg
gcaatgggcaaaatgtgacggagtccgattttcgaaaaaaaatcatttcg
gAAAAACCgactttttggcattttctcaagatttcatcattagttttttc
tgattttttgcacaaagatgcgtattagcaatccccaaaacttggccgag
tcagatttttgagaaaaaatcttttctggtcgaaaatgccggaaatatgc
cggaaatcgctgtttttgcagattttcatcggactttttccttatatttc
gttgttttttcacacaaaaacattattaatagtaatgtccacgatcaagc
atgattcaactgtcattaaaactgatttttgaagccggaactttctaaaa
atcgccggaacagccgattttcgccggaaaaacggtatttcttgaatttc
ttgagctgtactttatattttttcatgaaattttgcacactgatgcaaaa
tgtcaatacctaaattgtggcgaagcccgattttcgaaaaaaattcattt
ccggccgaaaatgccggaaatatgccggaaaaactggtttttgtcatttt
ctcgagattttatcattagttttttctgattttttgctcgaagatgcgta
ttaacaatgtccaaaacatggccgagtctgatttttgagaaaaaaaattt
tccggcggaaaatgcctgaaatatgccggaaatcgccgtttttctagatt
ttcattagactttttccttataattggttgttttttcattcaaaaacatt
attaatagcaatgcccaccatcaagcacgtttcaattttcaataaaatTG
ATTTTTGAAGCCGGAACTATTTTAAAAGTCGCCGGAACAACCTATTTTCG
CCGGAaagacagtatttcttgaatttctcgagctgtactttctatttttt
tatgaaattttgcacactgacgcaaaatgacaatacctaaaatgtgatgg
agccctaTTTTCGaagccggaaaaaccggttttttgacattttctcgaat
ttttattgttttttctgattttttacagaaagatgcgtattcgcaatgtt
caaaacatggccgagttcgatttttgagaaaaaaatttttccggttgaaa
attccggaaatcgccgtttttgcagattttcattggattttttccttaca
tttctatttttttcacacaaaaacattattgataacaatgctcaccatca
agcattgtcaataaaactgaattttgcgaccagaactttctatttagttt
ttctctacaacccttccctctccccctaccatcaatcaataatgaatttc
ttgcgttatgcattttcgctaaacgctatgttttctgactgatttttttt
catttttctccttgcattactgtatctaactttcatcatcaggtaggtcc
atattAAGTCCCACGAAACTTTTATAGTAAactaatgaaagatttatatt
cGTTTGATTTCGTTACAGAGGATAGACCATGCGCATCCCATCCATCGAAT
CTCCTTCATCAGTCATGACAATGATGACAAACGAACCTTTGCCTATATTG
TCGGCACAAAAGAAGGATACAAACTCTTTGCCATCAAGTCCATGAAAGAG
GTATTGAACTAAACTTCGCACCATGCCCTATTTTTAATGGTATTGTctca
aaaaatttattatttttgaagCAGCACTCTTCAAGAAGAGATGTTTCAAA
TTTTAGCATattattcaccaaaatttcaaggtattcTTGTTTAAGATCaa
tttttccgtctcagacgaaaaaccttgctttggTCACTGCATTTCATATT
TTGGTAGTGTCTAATAAATTTTGTTGTTCTTGAAGCACCACTGTCCAAAG
AGAAACACAAGTACTTTTTCTGTTTGTATCGATGATTAATGTATTAAACT
TAACATTCCAGTtcgatcaaatttgattttaaaatttgttcCTCAATTTG
TAAGATCTTTTGAGAATATCCGCTCAGGATTTTTTTATCTCTCTTTAACT
TTGCTTGATTGAAAACCATCATAGGCAGAGCAAATCACAAGCACGTTGAA
ATCACTATTCCAAGAAGTCTTTGAACGTTTCCAAGCCAAGAAACAAGAAG
AGCAAGTGGAGGAAGCTACTGAAACAAAGGAGCAACCAGCTGTCGTGGAG
ACTCCTGTCGTCAATGAACAACCATCAACCAACAATGAAGGGAACTTCTT
TGATGTCAATGAAGACGTATGATAGGATCTTCTTTCTTAGAAATTAATTC
TACAGTTTTGAACATCATTTCATTTTGTCTTGTCTTTCTAGCCCTGGGTT
AGGCgacccacttttcgccctgtcTATATAAATGGTGAATAATGTTGATA
GAAACTTGACTGTCTAAAGCCATTGCATTGcctttttttgacgtcaatgc
aatgacttgcAATCGGCCTACTTTCTACCAACTTATCGCCTACTCAAgca
attagaatagacagggcaGAAAGTCTGCCGTCTCAGCTAGACTTAGACGA
CCAACTTTTTCCCCTGCCTATTctaaaagattgaaagaagataTTCCAGT
GACGTAAAAAGAGGGCAAAGCATTGACTTCAGACAGCCAACAATCTTGCG
TTTCGTCTGTTCATGTTGCCTCTAAAAGATTCTCATTCAAAGCCTTTATC
CCCAAAAGAACTTTCCCTTCAAATACATCAAAACATTGTTTGAACCTTTA
CAGATCAGTGTTTTAAAAGCTCTCCCATCTCTGTGAAGTATCTGAAGATG
TCTTTCTCAAAATTATGCATTATTCACCAAAATTTTAAGTAtatgtgcta
atttgctgtgtaaaatccattttacagtgttaaaagtttttccgtctcaa
acggatttccgtctcagcgAGGTCTATAAAGAGgtttttccgtctcaaaa
ttcgacaTAATTcatagaccagcgtccgagattcaaaaaaggccttaaaa
attgttttcgtagggcaccccttagatcagggcaaatttttgatattatg
ctcctaatagggtgtagaatcgacaaaaaaaatttgcccttcgaatctcc
tgcagttttcgagtgaatcgatttttagttaatcgatagaactcatcaag
ggtcccccctttactaacggttttttcgaagtctgaaaatcaaatatctg
agactaccaacggattcagcgtgaaaagtagataaagaaaatggggttat
ttgttaagtttcgaccacctgttgccgagaaatggcacttttaaggcgaa
aaatcgaagtttttggcgttttccgatgacgtcagcattttcctatgagc
attttcagaaaaagtcattcccacagctggatagccctgaattagtagta
tccaaaaatggtatggtttgtcaactttcaatgtatagatctcgagataa
ttcatttttaaggtggataattatgctgaaaaactgctgactcagcaaaa
aatatcgataattttcaatatttaaaccaaaatatctcgagatgtaGACA
TCGAAAGtcaacaaaccataccatttttggatactactaattcatggcta
tccagctgtgggattgactttttctgaaaatgctcataggaaaatgctga
cgtcatcggaaaacgccaaaaacgtcgatttttcgccttaaaaatgccat
ttctcggcaacAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTA
TCGATTAACTAagaatcgattcactcgaaaactgcaggagattcgaaggg
caaattttttttgtcaattctacaccctattaggagcataatatcaaaaa
tttgccctgatctaaggggtgccctacgaagtgacacaatccactgactc
ggccgctggtctatcaccaaaatatcaagaatgtGCTATAGTTTGCTGCG
TACAATCCATTTTCCATCTCAGACGAAaatcttgctttgaccactgaacA
GATatatcatttttgaattttcagccaACTTACGACAATCCAAAAGATGC
GTTTGGAGACTGGAACCAACTCAACGAACAAATTCAAGTCATGCAAAACG
TAAGACTTACTTTGACCTTAAAGTTGTTTAGCAGGTCTGATTGTTTTGAG
GCTTTGAATTGGAGAATGAGTTGATTGGAACAAAATTAAAACCAAGTTgc
caaatcaaaaaataattgaaaattaacTTGACTTTTTAGACAAAATAGAA
GGTATCGTATCATATAACAAGTATTCCAACAAAGACCAGCAAaattgttt
tagatttttccaCGGTAAAGGAACTTCTACTTTATCTTGTTTAACCTTTT
TCAGGACCAACCATCAGATGGGTTTGACATGTTCGCCGACACTAACGGAT
ATTCATCCACGACAACCAACGATCCCTTCGGTGGTGATAACTTCACCAAC
AACTCCACGACAACTGACCAAAACCCCTTTGATGACTCGTCCCCATTCAA
TGCGGTAGATCCTAAACAAAACTCTGCACAAAAGGATCTTGATTTCTTTG
CAGCACCATCCGTTCCTGCCCGCCCTGTTGAACAACCGCCTACCCAACAA
ACTGATCAATTATACAGTGTCGTTCAACGGCCTAACAAAACAGAAGACGA
TGCTCCGCTCCTCATAAATGACCCGTTCGCTGAGCTTAAGAAGAATATCA
ACGAGATGCACAAACAAAACCAACAACAACCACCGCAACCACAATTCGGT
TATTTCCCACAACAGCAACCAATGAACGGAACAACTTCGCCTTTCCAGCA
ACAACAAGGGAACCCTTTCGCAAACACTCAATCCTTTGGTGGTATGCAAC
AACAAAATCCTTACCAGCAACCGATCGTTCCACCCCGCCCAGTTGCCGCA
ACGCCCGCTCCAAACCCTTTTACCACCACTTTACCAGCGGCGGCTCCACA
AGATGAATTCGGGTGGACTGTCACTAAACCGGTTGCTGCTCCTCGCAAGG
CACCAACACCGGCTGCACCATCTAACCCACAATCCGATCCTTTTGCTTTC
TTGAATAACCAAACAGGCCCCACAACAAACGCTCCTGTGGAAAGCAAACC
AACCAACGGATTTCCAGCGCAATTCTCGAACACCTCTACTACGTCAGCTT
CCAGTGATATCATGGACTTGCTTGGTTGAACAAGggatatttgtttttat
tcatgatatgcatcattgcaatgtcttttgttctgacattacatcacgga
cccaacaactggttggttgtaagtgacgtaaaatcagtcaatacgtcact
ttcaaccaatcagctgttgggtccttgGAAGACATCGCAGTGGTGCGTAT
CATGAATTAATGTTCTTAAGCTCTAGTTTATACAGCCCACTTTTCGCCTT
GCCTATTCTAAATTtgaattaaagtgggcagaaagttggcTGTCCAAACC
AGAGCTAACACGTTGTTTATTTACAGTTTCGTTGGTCTATGTCACATTGT
TGACCTTTTATGTTTGCTGCCTTTTGAGAATATATTTTGACGAGCTTACG
AGATTTATAGAGATTTTATGGCagtgtttttgtttgtttgtttgtttaca
gTTTTGTTTGTGCAATGTAGGTTTGCGTTGAATTAAGAGACACCTTCCTA
AAAGGGAGATATTCTCTAACTGTAACGAACGTCCCCGTAAGTCATATAAA
TTTTAAAGGCCATTATTTGACGTACCATTTGCTTCCAcaacatttttaaa
caaaacgaAAGAATGACTTTCTCACCTTTCGACACCGCACGAACACGAGC
ACGAGCACAAATTCGAGGAGCTCTACATTTATTTTGCTTTAGAAACAGAG
AggttttaaatttcgtgcctgCGGATAGgatttagcattttaattgtttt
tggagcgcgagatcaaaaaaagtaggcggcaaacgctatttcacatccct
caaaccggtgaaattgcatattttagttacgtgactttggtaggaaatcc
ttccaaacctaggcttcacttttcgataaaagttgcTTCGGGCTTTAAAG
ATCTGTGGGTGCGCCTCCTTTCTGTATcgaaaaattaatatctttcGAAT
TTGAATGACCTCCAGAGAACCATTATAAGGACGGGAGATTTTCTAAATAG
TTTTCCCGGGGAAAGAGAAAGCGGGTTGAGGGAGTTACTATAAGTTTTTT
AATTTCTAGAAAATATCTATTCATTTTTTACTGcagtatttcaaaaagat
tttttataccaaatttgttttttatatttcaaaagaGAGATAAAATATAT
AGAAAGTTTATATATTAGTCagatgaaacattttttttagaattaggtga
aaataagaatatatagtgtttccggaatgcgggtgaaggaaaaaagctct
catgcggccggccggaaaaaacttttttttttgttatttttgataacttg
aagtaagtaagtaatatgaagtaagccctgaaaactaatgtatcaactac
taacgaaagTCTGCGGCCGAGTCAGAGAATATGTTTTTCCACCCTGCCGG
TTTCTGGAAACACTACATatactatttttatttttgccttatgACTGCTT
ATGATGTAGTTGTTCGGtttcttttcagatttttacgtttttacttCAAT
CTAATATAtggttttcaaaataaacaaataaaatactttcaaaGGAAAGT
ATTCTGCTAAGAATTTGGGTCCCTAATGGAAAGTATTTAAGAAATATCCA
AAGAGTTGACACCCGCTTATAAAGTTACCCGAGAGTAACTAGCTTCCTCT
AATTTGAAACCTTTAATATCGATTTAATTTATATCTTAATATTTTCCAGT
AGATTTCAAATGGCTTAGAATATTAGATGATATTATATTATTGTAAATGT
TTATAATCAGCCGAAACTAAACAAATGTAGTGTTTCGGGAATgtgggtga
aggaaaaaagctctcgtgcggccggccggaaaatcttttattttttttgc
tatttttcacCCGACCGGTTtctggaaacactacatttttttattttcgc
ctcaaaataacaattttctcaaattattctagattgttcttaaataataa
aaatattttcaatttcaaaagaaattctttctaATTTATAGTTACATGTA
AACAacaaaatgattaaaatttatcacaaattataaaaattattattatt
ttatggTTTATAATTAACCCTTTTCAATTTATACCGATAAGAATAGAAAT
ATTGATTCGATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058418TCONS_00058418Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058418-proteinTCONS_00058418-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:9016..20677 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.23	2.57	1.58	1.73	11.35	9.03	12.67	13.71	9.88	13.37	12.57	5.86	19.19	18.96	20.74	26.23	24.17	19.5	9.57	10.43	18.86	21.66	18.72	20.67	14.65	15.62	9.71	8.85	38.92	30.57