XLOC_036850 (gene) - C. hemisphaerica

Overview
NameXLOC_036850
Unique NameXLOC_036850
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:1197463..1206780+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036850 ID=XLOC_036850|Name=XLOC_036850|organism=Clytia hemisphaerica|type=gene|length=9318bp|location=Sequence derived from alignment at scaffold_311:1197463..1206780+ (Clytia hemisphaerica)
TACAGagaacaaaaataataatacaaatcatataaaaattataacaacac acaaaacacaaaaatctGATTGTAAATCGATAAGatctttgaactttttt tttctgagTGAGAGAGAAAACaagaaaatccataatggcagatagtTGTA GTAATTCGTCTGTTGGCTCACCGTACGCAAGCAGTACTGACCTTCGTGGT GAGGATAGTGAAGAAATTATGGAGCGTGGACGACGCCGATCACGCAATCT TGGCTCCACAAGCAGCCGCAGAGCAGTCGGTGGACTGGACCTAGAGGACG TCGAAAATACAGTTCGTGGAATGCAACAAGATTATAATGACATGAAAACA GAATTTGTAAGTCATaccaattattttattttcaaatgtcATTTCCGGAT TGAGATTTTCGGTCTTAcaacagtcaactctctctaattcgaatctctat tattcgaatcatTCTGtgattcgaactaaaatattggtcctctcACCTGA AAggtggtttaaattactctctgtaattcgaacatttCTCTAAGTCGAAT AAAAtatttggtcccttgaagatcgaattagagagagtcaactgtaggtT TGTTTTTTGTAAGTCATCCATTTTGCCTCGCTGGGCTGGTAAGAAGATAT TGGATCTTTAACCATTTCGAATGAAGTTTTAAGGAGACAAATACCAATGT GGATAGAGAATGCTTTGAATAGCTTTAAATCAACACACCTAGAAAATAAT AATAGTACAAATGGCAAATTTTCCTCAACAGAAACTTGAAAATTAGATTG AATCGTGAATtatatttcaaagttttctcctaatgtaaaagattttattt tgtgattttttctaATGAGCAGAGGATTGCTAATGATTTTAAACTTCACT GTCTTCTAGGGCTTTTTATGCATAGGTCGAAGAAACGATCTCTTATCAAA CTTTTAATCTCGTTCTATAACcttgattatttttttaccgAGAATTTCCG AATCTTGGAACTTTCAAACGTGTTATAGGCTTCGTTTCTTCTTTCTGCAC ACTAAAACACAACATCCAATGTCAAATTCAAATTAGCAGTCTCAAACTCA AGTTGAGACTTTCGAAagcgaaattttttgtcaataataaATTTAAACCA ACCACGGTGCTTTCTTTCGCTGCTGTAAATTAGACTGAACTCTTCAGGAC CAAAAGAAAAAACGCTGGGTTTTTTTTACAACTCGATATCTAATTCTTTG TGGAAGTATcgtatggcgcgccaaaaggctttttaataccaacttttttt tataataccaacttttttttataataccaacttttttttataataccaat ttttcttataatatcaacttttttttataataccaactttttttattata ataccaactttttttattataataccaactttttttttatagtaccaact ttttttttagttcgaagttttttcaataaCACCAATTTTTGTCTCGCTTA CTATGCATGTATAATCGATCAAATGTAGAAGGAGTCTTAGCGCGATTACA CCTAGCCTGGAGGCCACTTAAggttttttgatagactggatgacaCGATT ctctaattcatgatatgcaccactcaAACCACTGGAGTCTTccgagaatt ttcaaaatattcaacccaatacgtcacttaaacaatagaaaaagtgacgt attgggttgaaTATTTCTGAAAATGTAGGAAGACTCGCCAGTGGTCGGCC AGTGGTGcacacagatctgtaaagcccgaagggctagatttgcggctttt atcaaaaagtgaagcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNagtgaaagttggtattataaaaaaatgttagtatta taaaaaaaagttgatattataaaaaaaagttagtattaaaaagccttttg gcgcgccatagtaTCGTTCGTGATTCTTCTTTGAGAAACCCTGTCTCAGT CATCATTACGTTTGTCAGCAAATGGGTTTCACATTAAGACTTTTTATCGT TCTTTCCCATTGCAACTTCTTATTAAGATTAATATTCAATTATAGTCAAT CATTCTAGTTTTGATGGCTAAAGCCGATACAACCGCTCATATTTCATCAA TCTGCAAATTGATTAGTCTAATTTGCAAGTGCTTATCTATAGAGAAATAA CTTAGTCTAATTATCACTTGCGATTAGCATACATTAAATAACCTTTTCTT CACTAACTTGCGACATTGCAAGCTAAATAAAACCCTCGTCTTTTATCATT CATGACTTTAATGCCAATTTTGAAGTCACTTAATAAAGCAGTATTTTGTT GTGGATTCTGCTTCTTGGCTCTTCATCTTTCTTCAGTACGGTAAATTTCG AGGCTAGCTTATTATTTTTTACCCTTATTACTACCGCCGTTTTTGGTTAA AATTCCATTTCCCGCACTAATATTCCACTTGCCACTCCCTagcttaaaaa taatttatgggcagttattgaaaaacggatgaacatggtcttagtgaAAT CCTAATCCGGGAAGTGGAATCTTGTGTTCTAAGCGAAAAGTCTTTCATTG TATATAAAAATGTTGATCCAAagaatggtaaaaaaaaattatactttgAT ATTGTACCAAAAACAGAAATTATTGTCTGTCTGAGAAAATACTATCTTAT CATGATCAAAAGTGGTTGCActtaagaaatgaaaaaattatatcaaaatt cCATACATTCTTTTCTCCTCCTTCATAATAATAATGCATCACCTCATAAC ACTCACCCTATAATTTCTGTTGGTTTCACTCTATCACCAACCCAACATAT TTCATTGCGGCTAATATAGAAAACTATTTTCTGATCAAATTACGCCTATT TTCTCTACTGTCTACCTATTCTTTTTTATCATCTCCTAGTTCTAGGCCAT ATTGTCCTCTACAAGGAGGGATCACTAATAATGTGCTCATTCTGACCAAA AATGAATTTTCCATTCTTCCTTGAAATTTATTTCAGCCCTATTTAGTTAA ATGCCTGCCTTAACCTCCACTCTATTTGTGTTACCTCCCAAATCAGCCTA GATAGATGACTAATGATGCTTTTGTCCTAGCATTTTTGTGATTACTTCAT TAACAGTATATCGGGTGTTTCAAAAATGCCCCTTTCACCGGTATATTTTG cgtaatataatatatattctaagtaatttttttttactttaaaaatctta tatataccgtttagaggggtgaaataagggtaaAAAGTCGAAAGTTtcct tcgtcgcccaaccatggtaggcgacatatttttttggcccccttAATTCA ATTCGCACGCCGGGGCCATGTTTCGGTTTTGCAGTTAACTTTAACTTCAT AAGTATAACTTGACTTTATAGAAGCATTAGAATTTCAAAGGTTATTTCCT AAAATTTCAGAGATAACTTTCCCATTAAGAGTAATTCTGAGTTGAAGAAA GATTTAGATTGCAATGTCTTTTCTTCCTTTCCTGTTCGACTCTTCCCCAT GCGATTTAAATAACAGTACTCTTCCCAGATTTTTTGGGATATTTAGGGTT GGCGTTAAGTGCATACTGAAGGCTCTATGTAATCGGGAAAAAAACAAAGC TTCGTTTTTTCGATTACTCCATTGGCTGGTGTTGTAATACACTATGAGCT CAAATCTTCTTTACTTTAGTGTGTCTCAGGTACCGTAGTATTGTGAAAGG AGAGACTAGACTAAGTTGTTAATAATTTCTTTTATGAAAACAAGGCTTCG TTTTTTCGATTACTCCATTGGCTGGTGTCATAGCTGGTCATAGCTTTACT GTGTCATCAGGTTCATATTCTCGATGAAAGAGAGACTAGACTATAAGATG TTACTACTTTCTTTTGTGGgcaatttttctctatttctctTAGGCCTGCT AATACAATTAACCAATACAGTCAGTAAACATATCAAATGCTTCAGCAAAT AGAAGGATACTACTGAATCAACATTTGAGCAAGAAAGATCGCTCTCCTAA TAAAGATCCGAGTCATTGTTTTGTGTCGAAGTACCTTATTTGTACTTGTT ACCAAACATTTTGCAATGATTGACCAATGATTTTGGTCATCtaacataaa tttgtttgaattttgggttcaatttcaatcaatccaTAGATTTTTACGGA TTTACACTTTGAGACGATAGTCAGTGTCACGAAGTCAATTGATGACCAAA GactaaatttataagaacatcaaggaTAGAAGCTCGGGACAAGAAAAAGA CTTGTTTTTTTCTTAGTAGAGAAACTGTCTAATAATTTACATCTGGAGGC AAAGTGAAATCGTTTTTCCctactttattttgatttatatGAAAGAAATT TGGAAACCAGGGGCTAATTCAAGTGCCTACAAAAAGAGCTGTAATATTCA TGTTGTCCATACAGACACTAATGTTTTAAGTGACGAAAGACTCGTCGTAA AGACGAAAATGATTTATCATATGTGACTAGAGACACCACcttatatggtc aaaattttcaaatctctTAATGATAGAAACCAGTCCATTTACCATAATGT AATATGCATTCTTTATCATAAGAGCTAATTATACGTCAAGAAAAATAGTT CTTTACCACACGTAACACCAACaaacagaatttaaaaaaatacaaaagac aTTTATATAATCTACGTATAAACAATCTATTCATTGGTTCGTATAGTAAG TCGAGGAGGAGGTATTTCAATCGATCGTTTTACAGTAATAGTACTAAACC CTTTTTGAAACCACTTGTGGTGGAGTGAGAGAGATTCATCTTatcttttt gttgattttctgagTTGAtttattttgtgactttttaccagaaaaaaagt ttttattttattttggaaagaGGAATTCATAATGGCAGTTGTTCAAGCAC CGCTCGCTTTGCTGCAATACAATCGAGATGATGAGCAATCAATACTGGTA AATAATCGAGTTTTGTTTTTTGGATCCTTTTCTTTAGTTTCAGTTTATGT ATCGTCTTGGTCATTCGATAATGTACCAGCTTTGAAAGAAGAGGGTCTAT AATATTAAGAATATATCCGAAAATAGTATAGCATGCAAAGCTctcctttt gtattttctttccCAAGCATCCTCCTTACTGGCGTTGGGGatattatttt aatgaatttttctaTTATGCAAAGTTTTTGGTTCAGCCATTGAATATGCA TTTAGTGGTTTAGTGCAATTTGtatgaaatttttcttaataAAAGTCAAA TCCAGTTATgttcgttttcattttttattgaacaaaacttttaaagaatt CTTTTAGCACACTGACGATTTCATTCATCAGTTCTATCACCATCTAATGT GAACCCAGAATGTTTTCAAGTTGGGAGGAGGGAAGGGAAATAGAATAAAT GTAGCCTATAATCAAAATAATTGTCATATATCCCTCATTCGTTTTAATTG AACTCAATATCTGATCGTCCAAAATGGTACCTTTGAAACGCGGCAGCACT TATTACCAAAACCCTTTTATTAACCTATGATTGGTCCAAGTTTACTTTTG ATGCTTCACTTGTAGTCTTGTTATATCCAAGCAAGGTCTTCATTTATGAT ATTCATTCATTCCGATTTCTGAAGTATTTGCAAATTTAAGCTAGAAATAA GCTGTCTAAAGTTTATCATTTCTGGCAAAAACCGGAGTCTTTCCATAGAA AACTTTTcgtaatgaatatcatgaattcaatCCGTGTTCAAGTAGTTCAA GTACCTCATTTTTAAGGACTGACACACCTGAGCACAGGTCGGAGGAGTGA TTCTGATACTAATAATTCGGGGAATCGAAAATGccttaaaaattaacatt tctCCATAGAAGGTTAAggttacttttttcttttcgcGTGATTCTGCAAT ACCACTATCATTGCATCgaacaaaaatgacaaaaaaatgttttccttgGC TGACATGAACTGTGTATATAACAGAGTTATGTAATGGGCGAAAACGAAAa tacgaaaattttgaaagtataCTAACTAATGGTTgtatttgaataatttt tttttctgccgACTTCCTTTTTAACGGCGCCAAGTCTGTTGTATCAGTAG AATGAAACCATGCAAATTCCTACATACTCTCTTTTTTATATACAAGCATA CCTTTAGCTCATACTTTGGCTCAAATtcggtaaaaaataagcataaatgc taagcataccttttctaaaacgctgacctttttagggttacttttaaagc tatttgagctttcttAGACCAAGTCTACgcatataaataagcataaattt aggctgaaaatgaaattttgctaagcatattgagcctcgacccgattttt ccgtatgcttataaataaaaaagagtgtattttaTTGCCTTCAATAGAGA GTTAGATAAAAAGAGATTTCCTTCTCAACACAAATTTGTTGTGTTTTATG GTTCCttcttaagattttatttccatCTACCTGATTATCCAGTTATCATC CGTGTGGATTAAATTATCATAACcgaatttatttttgctttctttgtttA TCTATAACCGATCTACTACATTCCTTCTCCTTAatccttttaatgatttt tgaggatttttgaaagaatttctgtgcaagtttaaaagattttgttacAA AATATATTAAAAGAACGCTGTCCTCAATACTACGTATTTGGGGGCGAGGT TGAGAGGAtaccttttattttgaaagtttgtttATCTGTGAGCCCGATGG AACAcctatattttcaattaaaaattacTCTTGGTTTCTACAGccttatt ttaatattttattaagAAAAGAGGGTGCAGCATATTGTCTCAAAAACAGA GTGATTTAGCCTAAAAATTGTCTCGTTGACACATCAACGCTTGCATCTCT TCCTTACTCTTCTTTGCTATGTATGTACTAGAGTGTATGAATGATGGAAA AGCCTAAACTAACTAAAGACGAGACTAAAGATACAATTTCTATAGTTTGA CTCGCTAATGCTTGAGCTAAGTGcctgaattttaaaattgtcTCTGCCCC GATTAAAAATCGAGTTAAAAGTTCTAACACCGGtgagttttcaaaatcaa agtcGGTTAAATAGATATTTTAAAAACTCCACAAAGTCATTGAGACCATG GTATGGATTGAGATGAGTTGGGTTGCAAGGTGATCAAAAATATGATAGCT ATGTCTTAACTTTATGACGGttgaaacagaaaaaaaaatagattaaaTGT TTTATATTTACATCTTCAGACTGGTATTCGTAATCAATCGCAATCACAAA AACGTCGCATTCTCGATCTTGAAAACCAATTCGAAGATGCTCGAGTACGA ATCGATAAACTTTTACAACGAAAATCGATTCGTCGAAATACATACGATTC GGTATCGAATTCTTCATCGTTCGTGACTCCTTCAGCTTCGTTTACATCGG AACGATCTTCGCATTCATCAAAAATGAACATCGATAGAAGCGATTCAATG GATTCGACGTCCTCAACAGAATTACACAAAACACAAATCAACATCAATCC AGCGAATAATACTAAACAAACTTTCGGTACTGTTACACTTACAGTAAAAG TTGATGAAGATTAACGGGaatcgattgattgattgattgattgattgatt gattgattgattgattgattgattgattgattgattgattgattgattga ttgattgattgattgattgattgattgattgattgaatgattgattgaat gattgaatgattgaatgattgaatgattgaatgattgaatgattgattga atgattgaatgattgaatgattgattgaatgattgattgattgattgatt gatctgTTGACAATGAAGGATCAGAGGGTAATGGTTCAAAATGTAATGTT TATTCTTTTTCACGATATTACAAATATTACTAACCTCGAATTCGTAAGGG ACTGAAAAATCTATTTgcaaaaaagtgacaaaattggTACAGATCTTTCG AAATTTAGTATCTGATATTTCCCTCTCTTATCCATTTCTACCTACGACTA catataccttattacacgaatatcaCTATTTACTATTTTATTACCacgga ttgaaaaatttcgtgttaataaaaatccccttaattaaaaccagtcATGG TGTcagtccttgaaaaagcaataaaattcgtgttaatttttggagtgtta atttcaaggccgttgaatacttgcctagtaatattcgtgtaacgTGTAAT AGGTATTATCCTCAATTTTCTAATTAAAATCAAGCGATCTTCCAAAAGTG CTGCATTATTGCAAAGTATCATGAAAATGTATAAAAGGGCATATTTTGTA CTCTCCATTTCGATTACTATATAATATTTAAATGGTTGTTAAAATCATCC AAAGACCCAGAACAACCTGGAAAATGTCTACCCAGTgagaatttcaacgt aacttGTTTAATGTATATTATAAATTTTCTAGGGATTATTTTTCATGGAT TATTTTTCTTGTGATTATTATAATTAACAAAATTTCcccgtttctttttt tttcgctcATGTTGTACAATGTTTAGAATTTATATAAGAGAAACTTACGG TTTATATAAAAATAGGTTATAGGGTtttttaaacgaaaaaaaattgtttt gttctttatttatgaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058490TCONS_00058490Clytia hemisphaericatranscript
TCONS_00058491TCONS_00058491Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058490-proteinTCONS_00058490-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:1197463..1206780 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.49 43 34.72 36.06 5.68 4.15 18.64 18.67 20.09 17.88 16.5 12.02 22.63 15.39 13.41 16.61 25.94 28.18 18.99 29.49 40.51 34.73 52.76 53.4 34.86 34.41 79.74 86.89 29.32 36.95