XLOC_036853 (gene) - C. hemisphaerica

Overview
NameXLOC_036853
Unique NameXLOC_036853
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:1263566..1269760+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036853 ID=XLOC_036853|Name=XLOC_036853|organism=Clytia hemisphaerica|type=gene|length=6195bp|location=Sequence derived from alignment at scaffold_311:1263566..1269760+ (Clytia hemisphaerica)
attgttttttctgtttttttctggCTTTAAGTTCTTTGTAAATATATGAT AAAAATTTCTTATGATTTTTTAGTTGataatattatatatattatgCTAT ATACTTGATATATGGCTAGATTACACCGACACTGAAATTGACGTATaaat aaaagagtttaaaaaatgctgatGTTCCCTCATTTGTTTTGAATGATAGT AATGACCACTATACAACACTTGAAACACTACTAACATTTATAAACACCAC TATAAACATTTGAATTTGGTTGGAATATCCAGTGTTGCAAATAAAGTCAG TTATTTTTTAGCTGTTTCCACCTTAAAACTAGTATTTGAAATATGAtgga attttccaaatttttactaTCAATATACACTACACACatccctaaaatag cttttgtTATGAGGAAACACCACATTCGCCGTATCAGTTCTTCCtccatt ttttgcaattttaagtTTCTGTTACAGACTCTATACTGTACACATTGCTA TTAAATTCTCTAaagctttttatgaaaattgaacaACATAATGCCTGAAG GACCTGAGCATTTCAAGGCAGCTGCTTTTATCAATAAACATTGTCAAGAT AGATCTTTCACTGGGAAGATAGTAAAATCTGAAGTCAATCATCGTAATCC TGAAATTGATTGTCAATATGAGACTTACACAGTATCAGCAAAAGCACGTG GAAAAGAAGTGATGGTTACGGTTACAAATCTAACATTAGATGAGAAGAAA CAACAGTCCATAAAGAAAAAAGGAATTGTGAAACTTGAaccagttgaaaa taaatcagaaCATTTCAGCATTGTTTTTCGATTTGGAATGTCTGGCTGCT TTAGGTTTACTGATGCAGATAATCTACCCAAGCATTCACATTTACGCTTT TTCAGTATTGATGGAATGGTTCTTTCATTTGAAGATGTTCGCAGGTAAAT AATATTAATTTTTACTGATATTTGTAAAATTCCGGCCTTACTAAAGTAAT ACAATTTACAGGAAGAAAGTCTAATTAATTCTCAAATAATTTTGTAAATA GCTTTATAAAGTTTCTTACTAAAGcctttttcacatgtacgtcaaatttt acttaagaccttgaatagtggggaatttccctaagctaacgtagtgtttt aaggccttatgtagagtttgcttacgttcaaaaagttttgaacggaagga aaagtcacgtaagaccctcttaataacaaaaactctacataatgtcgggg aaattcccaaaagacagccttacaAACGATTTACCCtaaggtctaaagta aaattttacgtgcatgtgaaaaaagcttaaaagaGTAATTTTTTAGTGAC TTTTTTCCCTTTCATCTTAGATTTGGGAAATGGAAATTAACAGATACTTT TTCAGCAGACAGAGGACCTGACCCAGTTTATGAATACATTGACTTTCGAA AAAATGTCCTCAACAACATCAAAaaccgaatatttcaaaaatctatcTGT GAGCTATTAcataatcaaaaatatttcaatggcATTGGGAATTATTTGAG AGCAGAAATCTTATACAGGTGAAACATTTTAAATCAAGAAATTTGCTAGG GCAATAAGATTTCTGATTATAATAGCTGTTACCTTTTTTTGGTTTGGTTT AAGATTTGTTGAACCACGTGAAAAAGAATGTGGTTATTAAATTTTTCCCA TAAATTAATTAATCCCATTAATTTTGTTGATTATTATAGATGTAAGATAC CTCCGTTTACAAAATCATTTGATGTATTTGAAAACTTGGCAATTGAAAAG GAAGAACCAAAGAGAAAAGCAAAGGTTGAGTTTTTTTGTtcatgggcccc ggcgagccattttgagtgagggggccaatattttggaaaaaaatgtcgcc caccatggttgggcgacgaaaaTTTTTCGGTTTGTGTGGTctgatttggt ctcaaaccagcttaaaatagtaactcttaaaaacgtatgacatAGTCTAC CAAAAAGTGGGGGGCCATGGACCCCCCGGCCCCCCCGTTGACGGGGCCCA TGTTGTTATATATGTTATTGTTCTATTCTTGATAAGCGATTATCGTAATT TGTTTATTCCAGTTTAANcgtatagagaggggcgccaaaaacaaaaaatc tttaaaaagggcgccatatttgccttggccaccccagagacattttccca ccacgccactgctaGTTTCATAGCCCTGGGGGACAGCACTCGATTAAAAA ACGACTGTAACTGCGGACCAAGATTAGGCGTTTGAAGTTGGAACCTTTGA GGAATTTCGGACAAAGATTTTAGGAAATTCGGACAAAAATTTACCCTTAA Ggtgtattttttttatcttttgaccattttaaggcaaaatatggtcagat tagCCAGATTTTACATCCTTATNAGCAATCTTCTATCAAATGTCAGGCAA AATAtgaaacgcaaaaaatctctCTCTAACAAGGTTGATTTTAATAAATC CTTCGGActaaaaaaagggttaaaaGTAAAGAAAGCTTTTAGCTCTAAcc tgaattttaatttttttttttgatttatattaacatttcattttttcttc aggGAAATGATGgtgattttgacattttagaaTATTGTTCATTAGTTCCG TTTGAGGTGATGGTGCTTGGTAAGAACTAACGAGTAACATTGCTTCTCGT TTGACTTTACTGAAGTTGTTATACTAGTAtccagtggcgtggtggcaggg ggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctataatttttct taagccattaagtttacaattgggcctacgaatgatttcaaagatactga agttgagccagtgcggttagcacgttcgacagttatAATATATTAGGCAA ATTCCATTAAAACCGATCTGAATAtgcaatttttgtaaaaagttttcaaa ctaaaagtataagtttattgaaaaaagtTGATAATCGTTTATGTTGTTAT TTTTCTCATAGAAGGTGGAGGCTATGATAAATCAGAAAAGGATTCAGAtt attcacttttcgaaaactGGTTACAGTGTTATTATAACAAGGACATGAAC AACCTTGTAGACCATGATGGAAGAACAATGTGGTTTCAGGTGATACCTTT TAGTAGCTCTTGTATTTCGATTAAAGATAATTTACCAGTCGAAAAGAACA ACACCTCTTATGTCAATATTTTGGCATCACATCTTCTTCAAGATGATTGA GTTTATACATCAGAATTTAGTTTCCAAAGGCGTAGAATTTCAATATTACT GGTCTACTGTACTTTAAATATAGGAGTGTATTGTATTCTAGAGTTTCGCC TGGAAGAGATGAAGCTGCTTCATCTTGAGTTTTACCATTAACGTTTTGCA GATTCTCAGAAATTTAATTGCAAGTTaacattattttcaatttatgtatt ttttgtatgttttcttttttagggtGAACCAGGACCTTTAGTTCCGACAG GTAAAGATATTTTATGGTGCTTTTTAGCATTTGCCCTAAAATCATAATCA GTACAAAAAACCCTGGTCTTGAAGCTTATTGCTTTAACCTTTAATTAGAT TTTTCCTTTGTCAATAACAAAAGATAAAAGTGGATTTGCTCAGTTTTGGA TCGTTACCAAATAAAAACACTCCTCTTGGGTTTGGCTCAAAATTTAATCA CATTTTGATTCTAAATTAAATCAAACTAAATCGGCAATGCAAGTTTAGGT TATAAACAATATAGAGGAAACAAACCATGACTTTTTCTACGGACTTTtct gaaatgaatttaaaaaagtctTATTGATTTTTACTAAAAGGAATGACTCG CAAATGGCtcgcattttttgaaattaaaaaaatctagGTCTCATCTTAAC TGTTTCTCATTGTATGAGAAGATAATTATTATCTACTTGATCTCTTTTTA GGGGAGAAAGCCAAAGCTAGACATAATGCAAAGGTTATAGTAAGTTCAAT ATTGCATACTTGTAATTATAAATGATCAGAATATGTGTTGCTTATGTGTT AAGGAAAAGCACTGATCTCTGACTACTTGACTAGATTGGGCTTCATTTTC CCTTTATAATAGGAGGTGTGTAAAGCTTTCTTGAGCTGATTAGTCTACCA TGTTTCTTTACTTGTTGTCAAAAGTGGgattcaaatgtttttaaattgaa acgTTTGAGAATGTGATGTAAAACAAAAGACAACATGGCTGACAAGTCGA CTTTAATACTGGATACACTTCCACAGGAATTTTGTAAGCCCTTTTAGCCT ATGTAGTGTGTAAAGGAATACGGtgagtgaaaagaaaaaaaacggtGGCT TGCTTCAAAAAGAAACAGACTATGATATAAACAACATCAGAGTTGATCTA AGCactttgaattgtttttcaCTATTTTCATACTTGATAGGTGCCTACAG AAGACAATAAAAAGAAGACAAAAGAAAAGAGCAAGAAAAACACTAAGAAA AAGGCCGAGAGTAAAAGGTCCTTGACAAAAGGTCATGTCCAGCCAAAGAA AAAGCTTGCACATGGACGTAAGAAAGGTAATATTAAGAAGGAAGAAAATG CAGATCTTGTCGAAGAGTGTGATAACAAAGATTCCAGCAAGACCCCCACA TCTTTAAAAAGTACTAAGAAAAAAGGGCCTGGGAACCGCAAGAGATCTAT TAAGCACGAAAGAGGCAAGATTGAGGCTACAGATGTTGAAGTGAAAGatg aaaaagtaattaaaattgatgatagTCATTTACGAAGAAGCTCTAGATTG AAGAAATGAAATTTCAGGGGACAATCTTTGTAACCATTCTGGCGGTCATT TTAtgccaaaaatatataaaggtGCGTCATGATGTTACACATTTATTTCC TATCAGCTCATTTTTGAAAGGCTAAACGATATTTATTGAATCACAACAGG CATATTTTGATCTCATACAAACATGGTAAACCTTGGTAAAACTGGGAATC CTGGTAACCTGTGCTAAGGATTGATGGTTATGTTGTattatagtattttt taagaCCAACACTTTCAAAAAGCCTAACATTTTGTatcataatatttttt aaactgtATAGCTTGGGTACTGTTTCTATtagtttttgtttatatttttc ttgtaagGTAGAGGTtgccctaaaaatgaaagtgataactgattattagc atgtttttccctattttattgatattttgTTTTCTCCATCATGCAAAGCT ATGTTACTAAATTTATTGTTCTGAGTATTTGAATATAGTAATAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058495TCONS_00058495Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058495-proteinTCONS_00058495-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:1263566..1269760 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NEIL1endonuclease 8-like 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.45 25.45 15.32 15.06 3.32 2.68 4.66 4.72 5.17 3.23 5.61 5.65 4.3 3.95 6.4 6.51 5.44 6.7 3.29 2.96 6.48 6.8 15.92 14.47 4.66 6.04 6.52 5.98 8.32 9.79