XLOC_036873 (gene) - C. hemisphaerica

Overview
NameXLOC_036873
Unique NameXLOC_036873
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:539308..542940-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036873 ID=XLOC_036873|Name=XLOC_036873|organism=Clytia hemisphaerica|type=gene|length=3633bp|location=Sequence derived from alignment at scaffold_311:539308..542940- (Clytia hemisphaerica)
CGCCCATCTTCGTCTAGTGAAAATGTTGATAATGTCACTGGCGAAAGAGG
GGTAAAACTTATATTATGTTGTTTGTTTATACCAGTGGTGGATATAATGT
GGGGGATGTAATGTGGGGGATATAATGTGGGGGATATAATGTGGGGGATA
TAATGTGGGGAATATAATGTGGGGAATATAATGTGGGGAATATAATGTGG
GGGATATAATGTGGGGAAAATTTAGAGTGGGGGATATAATGTGGGGAATA
TAATGTGGGGAATATAATGTCGGGAATATAATGTGGGGAATATAATGTGG
GAATATAATGTGGGGGATATAATGTGGGGAATATAATGTGGGGAATATAA
TGTGGGGAATATTAATGTGGGGAATATAATGTGGGGGATATAATGTGGGG
AATACAATGTGGGGCATACAATGTGGGGAATATAATGTGGGGAATATAAT
GTGGGGAATATAATGTGGGGAATACAATGTGGGGAATATAATGTGGGGAA
TATAATGTGGGGAATATAATGTGGGGAATACAATGTGGGGAATATAATGT
GGGGAATACAATGTAGGGGAATATAATGTGGGGAATATAATGTGGGGAAT
ACAATGTAGGGGAATATAATGTGGGGAATATAATGTGGGGAATACAATGT
AGGGGAATATAATGTGGGGAATATAATGTGGGGAATACAATGTAGGGGAA
TATAATGTGGGGAATATAATGTGGGGAATACAATGTAGGGGAATATAATG
TGGGGAATATAATGTGGGGAATACAATGTAGGGGAATATAATGTGGGGTT
CAAAATTCATAGCTGAGTGTTACTTTAGAAATACTCCTTACACGCCATTT
TTCTATAAGAATATACTTTTATAAGAATGTTCATGACAGAATGGGCCTTA
AAATTAAGAATATGCTAAGAATATCACAATCATGGAATTTTGCAACTAAA
GCTAGAGAATGCCATTTTTAGAGCTTTTTCAATTTTAAATTGCCAATTAC
CCTCAAGTAAGGCTCAATACTTCAACAAAGATGCCACTTTATGGTTTAGA
CATATAAATGAAGACAAAATGGTAAAGCTGATTTGAATTAGGGTCCTAAC
CTAAGAATGCTGTAAGAATGCTTTAGGACGATTTCCCCCAAAAAGTTAAG
AATATCCATGATGAAATGAAAAAACACCATTCTTATAAAAAAAAGGCGTG
TATAAGGGATTAAAACTCTCCGTGTAATAAATTTTGAGCCCCCTTGGATC
CACGACTTTATACATAAGGTCAAGCACCTGTGTTGGTTCAAAATTAATGA
ACGGAGAGTGTTTTTTACTCCTTATAATCTCATGGTTGATTGAAATACGA
TTGACGTTTTTGCTTACGTTAATTTGTAATTTCCCGCGAACTTGTAATTT
CCCTCCTAGCTTTTGTAATTCCCCTCCTAGATTTTGTAATTTCCCGCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCGGTCAAATTTC
GAAATGTTTTAAATTTCCCTCGTTGCACTCGGGAAATTTCAAAAAATTTC
AAAATTGACCTCGGAAAATCCCGAATTTCCCTCATAACCATGAGATTACT
AGAACTAATGAATTTTGAGCTTCTTCAGATCCACAACTGCCCGCTGCTTT
TATCGTCAGAATCGTAATAGTCTATTTCGTACAGGTTAAAAAATAAACTG
GACTATGGCTTCAATCACTCCAACCAGATTCAGTGGAAGACTTAAGCAGA
AGAAAAAAGAGATTGCAGATCGTGAAATACGGAAACAGACGGAAACATTA
ATTTTCGGGAATCTTGTCAATTCAATCAATTTGGAACGAGAAACATCTAA
AGCTGATAATGATGTATCAGAAGTGAAGGAATTACATCTTGAAAATGATT
GTGAAGAATTGGTAAAGAAACTTGAACAGATTAAATTGGAGAGGAGATCT
GATCGNTGAAGTGAAAGAATTAAATCTTGAAAATGATTGTGAGGAATTGG
TAAAGAAACTTGAACAGATTAAATTGGAGAGGAAATCTGATCGCGTGAAG
AAAAAGAATGAGGTGGATAAATACAAGATGCAAATAAAGCGATGCAAAGA
AATGAATGCGAAATACAAAAGACAGTATCTCGACGTAACGCCTGAAAAAT
ATTTCCAGATGATGTTTAATGCTAAAATATCATGGATAGGCGATGACACA
TGGTTTCGAATTGACGATAAGACTTTCAATATTAGTATTAAACCGAAAGA
AGAAGAAGAAAATGAAGGAGTTCTACCAGAAATCGAACTGATGAGAGACA
TAGAACGAAAACATGCCAGCAAAGATGATAACCTTGTGTGGGGTGTTGAG
AGATTCGCATACAAAACAGAATCTCATCTATTCGACTCATACCAAGAATG
GTATCAACACATCTCTGGTTATTTACCAAATAAGACGTTTCGAAAGGTCA
TCCGCAAACCAAACGATTATTACTTCCTAAGGGTAGAGCTTCATGAAAAA
TACGATCACCTGCACTTGATCACTAAACGAAAAACGACACCACCGCCAGC
GATGGTCATGCCTAATCATTTGCTAATGGACATTAGTGGAGATGTTTTTG
AACAAATGCACTCGTTTCTTTTACATCCAACAAAAATAGAGGGAATCCGA
ATGTCTCGTGTTAAAAGCGCTGATTGGCTTGAAAAACGTTTCTATCGCGA
ACTGGAAGATGGTCATTATTTTGGCGAAAATAATTCAGTCATTATACTGT
TCCATGAACTGGTTGTTTTTAAGAAAAACTAGAGGACACATTTGGATTTT
TGGATAAGCAGAATAAACTTTAGAGTTTAAGTTTTATACAAAGTGTATTT
TACAGAACAATATACATGAACGCACGAGCGAGCATTCGTTACCGCGTGTG
CCATCCAGATGTGAGTGTTGACAATTCAAACTGTTTTCATCCCTTTTTGA
CAACTGTAAGGTGCAGACATGTTTGAAAAAAAGACTAAATTTTATTTATA
ATCGTCGACCCAAAAAAACATCAACGTTTTGATTGGTCAAGAGCATCGAG
ATATTTGCGATATCTCATATTTCTCTAGTATGGAAATATGACCGCGATTA
TCGGCACTTTACATGTATTAATTGTTTTCATTGATAAAGGTGTTTTTTTT
ACTTGTATTAATGGATACAGGAGACTTAACTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058535TCONS_00058535Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058535-proteinTCONS_00058535-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:539308..542940 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16	0.26	0.33	0.21	1.07	1.21	4.56	5.73	2.3	1.19	2.33	2.26	4.24	4.55	3.05	5.72	1.89	2.91	0	0.03	1.43	1.46	0.7	0.85	2.22	2.51	0.22	0	0	0