XLOC_036986 (gene) - C. hemisphaerica

Overview
NameXLOC_036986
Unique NameXLOC_036986
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_313:378157..381849+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036986 ID=XLOC_036986|Name=XLOC_036986|organism=Clytia hemisphaerica|type=gene|length=3693bp|location=Sequence derived from alignment at scaffold_313:378157..381849+ (Clytia hemisphaerica)
TTTTAATTGCTCCAAATCGTCACTGATGTAAGGAAAGTTAAGTCATAACA
AACGTTCGTTACATTAAGATTGAATCAAAAAGAGTAAGTCTTGTCCTGAG
GAAAGAAGCCATCTTCGCTGTTCGTGGTGATTTCTTGTGTTTGTGAGTGT
CTTTCGTTTTCTTTCGAAAACTGGAATCGAATGTTTATATGAAATTCCGA
GAAGAGCAGCCCAACTTACACTCTTCCGCGGATGATTAATTATAAAGAAT
TATATAGACCCAATATTCATAGAAATGGTGGTTTGGTGGTTTGAAATAAA
ACTTCAACCAAAGTTGTACAATAGCAGTTTTTCTGTGATTCAANATGGTG
GTTTGACATAAAACTTCAACAAAAGTGGTACAATAACAGTTTTTCTGTGA
TTCAAATAATTAATTGAAAGTTCAATTTTCTTCCAGGACtgttattttct
ttattatttttctacACTAAGGAGAAGAGCTGAAACAAATTCGTGTTTTC
TTTTACACGGAGTTCTACAACATTGTGTTTTCGATTTTTCTTCAACCAAC
ACGCACATCACATCCGCACCAGCAAGCCGACCACAACCAACCACAACCCA
ACAATGAAGATGACTTCAAAGCAGATTCNATCCGCACCAGCAAGCAGACC
ACAACCAACCACAACCCAACAATGAAGATGACTTCAAAGCAGATTCCTCT
GACTTGTCCTGGACACACCAGGCCAGTTGTAGACTTGGCATTTTCAGATT
CAGAAAATGATGAGGCATATTTTCTCATCAGTGGATGTAAAGGTAAAATG
GTTTGAGCTCTATAAAAATGGTTTGCTTTTTTGTTGTGGGCGGGGGTGGT
cctctttttctttgttgttcTTGTCTCCTGTTCTTTTACTGTAGCAGGCA
TATTTCCAGGTGTTTTCTGCTACCGGATAACGGTAGCATTTCACacagcc
cttctttttggcacccgcgCGGGGCCTCTCACTGCCTTGCACGACGGGTg
gggctgtaaaatcccacccttaatatatttgtttcaatccgttaggtctg
gcttaggttttttctcatcttcaatttactgaagaaagagGGAATTTGAC
GCAAGAGTTAGATtatcaacaaagtgccgtaaaaaatcattgaataaaaa
agaagaactttaaagaAGAATTagtgcaaaaaagtgaagcatggaaaagc
ttcattttttattgtttcaatcgaaataggggatttggaaaacttcctat
gtttggttttttgcacaaacccctgtatctatgggcgagcacctggttgc
taagatgttggcttgaaatcgaaagtgaaaccactaaaaatgaaagtaaa
attggcCTGCACTCCAAACGTCGTAAccttgatataggagttttgGTCTA
TACTGCAAATAAAAGATTAAAGAGAAGAGCCATAATCGGCCAAAATTGGT
TGTTCGTCAATCGTGGAGATTTTCAATCTTCAAAATTAAGTCAGTGAGTT
TCTTTAGCTTTCCTACCGTTAGTTGCTTGGTCTAATATCAACTTCTTTCT
TCTAATTTAAACACCCTACTTTGGAGATGGGAATAATAGGAATGTCCGAA
TCACTAGgattgaaactgattttctttgcttagcaatcagagaaaaaaaa
aagtaatctctatcagtgattctgaccttcataatattcctatctataaa
aaagggtgtcagaattagaagagggatgttgacattagaccaatcACATG
GTATAGGTCTTTTATGCTTTTGAAGAtcccccaaaaatcataaattttcg
gggcttacaattttgtctaaaaacgcaaaaactgCCGGCTTTCAAGCTTG
GTAAAAttcaaattcggaatcagcCCCCTCGAATTGAGtaagaaacatat
caaaaagttggtcacagacattttgaattttttctttatttttgaaactt
tagcaaTCCGCTGACCATGGTCTTAATGATCTTCAAAAAACCGTAGCAAA
GACAAATGAAACGGTTTTTTTCAAGATGTTTTCATggtcagaaaaattga
attttaaggtGCTGTTTTTGGTTACGGTATGTGAAAAAAAGGCATCTTTC
TTTCCCAaaaattcaattaaattgaaattaccTAAAGTTGAAACAAAACC
TGGCAAACATTCCAAAGCTATAAAAAAGTTCCATTTTCAgaactaaaaaa
agttttgttttcggAGTAGAAACTAGAACTAGACTTCAAAATGTATATGC
AACAGCAAGTATGAGAGTTACCTGACCAAGTTCAAGATGAAAAATAATAG
TATTAATAATAATTATTAACTTAATAGTATATGAataagattttgaattt
taaatttcagaTGGAAAACCAATGCTTAGACATGGTGAAACAGGGGATTG
GATTGGAACATTTGAAGGACACAAGGGTGCTGTATGGGGTGCTACTTTGA
ACAAAGATGCCACACTTGCTGCTACAGCTGCTGCTGATTTCTCAGTGTAA
ATCTTATTATATTAGTAACTTATTAAAACCCCTTTTTCCTCTTTAAAACA
CTCTTCTTAGAATAATTACACACATCTTGGTTGAAAAGGATTATAAATAA
GGAATACAATTAATCCTTTAAATCATAATCTCCAATGGTTCATCATAAAC
AGTTTCTAGAAAATAAGCCAATACAATGTTGATGTAggcttatttttaaa
aagtttataaaaaagACATTCCTACACAAACATCAAAGTTTCGAGCACCT
TTAGGTGTCTAGTTGATCATAGGTGATGATAACCACCGGAATCACACATT
AAGTAATTCCTTCAATCAACAATGAATCATTTGTATCTTCTTCCTATGGA
CTTGGGAAATTACAATTTTCTAATTGTTACTCCTGATATGTTGTTATTTG
TACTTCGAAATGAATGTGTGATTAATCTAATGACTAAAATTATACGTCAT
GCTAAATTActcaaatctgattggttttgttgttgtttcttGGGTATGTa
tttaatagtttatttcatgttgatgaaaaggtagcaacaaaggctaataa
aagccAATGCTACTTTACAATTAATTCAAAGGTAATTCAAAGGGTAATTC
AAAGATTATTTGCAAAACATAAAAggataaataaaaaatcagaaGGCTTC
GAGGTCTAAAGTTCTTAAGAAATTTTAGCGTATGAAGGAACTGTCCCGTG
AGGCTACAATCACATTACAACTTGTCCTTTGGAGatgtgaaaatttctat
tttctcctttgataTTCTCATTATTACATCAGAACCATATGATTTCTCCT
ACAAAATTACCGTTTGAAAATAGAGTTCAATAATAATTTCTTATAAGttt
tcttgtttaatttttaccttattttaggAAATTATGGGATGCTGTTGCAG
GCAAAGAAAGTGCTTCATTTACACATAAGCATATTGCTAAAACTGTTGAT
TTCTCTCAGGTAAGATTATAGATCTCTCAATCTAATGTATTACACCATTA
CCTATTCGTGCATGATAACTTTTgttgatttctttcaatttcgTGTTTAC
ATTCATTCCAATCAAATATTgtatttgtttgaaaatatctttaatgtaga
tctttttctttttccaggaTGGGAATCTTTTGTTAACTGGTAgtaatgaa
aagaaaatgagaatttttgatATACAAAACACTGATAAAGGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058707TCONS_00058707Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058707-proteinTCONS_00058707-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_313supercontigscaffold_313:378157..381849 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
88.69	97.22	27.79	21.41	107.11	78.85	98.02	92.46	129.9	113.74	110.55	147.41	63.32	68.41	59.16	73.64	56.04	58.44	36.1	43.97	46.9	47.33	76.87	72.76	82.94	72.01	62.25	52.24	51.19	56.9