XLOC_037100 (gene) - C. hemisphaerica

Overview
NameXLOC_037100
Unique NameXLOC_037100
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_314:717830..721333-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037100 ID=XLOC_037100|Name=XLOC_037100|organism=Clytia hemisphaerica|type=gene|length=3504bp|location=Sequence derived from alignment at scaffold_314:717830..721333- (Clytia hemisphaerica)
TACTCTTAGACCACTAAAAAAAACTAAAAAAGTGATATAAATAAAATGAC
AAGTACAACTGAGGATTTGACAGATTTTATTGACGACTTTATGAGTAAGG
ATAAGAATGCCAATATCCAGACAACTACACAAGATCAAGAAGTTGGTGTT
GATGAAGATTTAATTCACATTGAGAAAGTGGAAACTGTGGAAGCCACACC
CTTCTTTCCAGATACTGTTGAGCTTTCACCTGATTCTCAAGAAGGTCAGT
CTAGATATTGATTTTCCTACTATACCATTCAGAAGATTTACAGAACTCCA
TATGAGAGGTTAAGTAGCCCCCTTTTTTATTTTTTTGCTGAATTATTTTT
CTCTGGTTTGTCATTATGATGAGTTTGTCTTCTCAGAGCCAGTTGGTCTA
TTCTCTTATTTTCTTCAGCAAAAGAAATAATATACCATCTTACAACATTT
TTTCTTTAGCAACCTTTATAATATGCCATCCTTGAAAAATAATATTATAA
GATAGAAATCTCACTGGAGAAAAACTTTTCTACTGTGTACTCAGACCTTC
CATAATTCATCAAATGATGTTATTTCCAGATATTTTGAATGGAGAAGATT
TCAAATATGCAGTTGAACGTCAACTTTCGGAGAGTGGTAAAATCACTAGT
ATTGATTATGAGGTTGACGGAAATAAAATCATGATTCAAGAACTCAAAAG
TTCTGTGGTTTCTCTCAAAGTTTCAACATCTCGGATTGAAAGAGAAGTGA
AAGAATTGTCGGACATTGTTGGCAAATTCAATACCGGTATTCCCCTCCGT
TATTTAAACACACTTATCGGCAATCCAAAAACGTATTTAGATAAAATATT
GAGAATTTAGTTGGACAGTATTTATGCGTGGAGCTGGGTAGGGTAGTCTT
CGGTAAATATATTATTTATTTTAGAAATTGAAACCGTAAAAAGCACAACT
ACTATTAATTTCACGTAAAATTTCACAATGTTAGAATGTAGATTGGAGGT
ATTGGAACTCAACTACATTACGATGCAGCTTCCTAGTTTTGTTCGTATCA
AAGATTGGAAATTTCGTATGAACTAGATTTCTTAACTGTGTCATAAATAT
TTCACACCTTTGACTTTGAATTAGTTTTGACATTTTATATCAAATTGAAC
ACGAGATAGATCTACTTTGTCTTTCTCAAACACGGTAGTTAAAGCGAAAT
AATGCGTCATCTTTGCTGAGTACACCACAGTGGTAGAGCACTATTCGGTA
CCGGCAATTTGCTCAATATGAACAAACAACTGACACGGTAGGAAAGGAGG
ATACGAAAAATTGGTCTTGATCAATCAAATTGCCGGCACCGAATTGTTGT
CTACTTTTAAAGATGTTGCAAATTTTGTATCAGCCAGGGATGGAAAAGCT
CTATCTAGCGTTTCTTTATCAGTCATTGTACAGAAAGAAACACGGGTGTG
TCGTTCGACGTTTCGACGGTTGTCTTTATCCTATCAAGTGTTTTATATTA
GATCTATGTGGTTTTGGCTTGAGTATAGTATGAATAATAAATTTTCTTTA
TTTTTATCAAATTTTCAGACAGACAAACATTGGATAATTCGTTGGTAGAT
TTAGAGTTTCGTTTCAACGAATTGGTCACGCACGAGGATGGGGATCTGGG
AACCAGGAGAGAAACAACAAACACTTCTAATAATGAAGAAAGTGAAAAGA
ATGCAGATTTCCAAAAACATATAGTGACTCTAATTGAACGATTGGAAATT
AAAGTCAAATTGATGGACGAAAAGATCTGCACTATTGGTATGATTTGTTT
TTTCAATTCTCTTTTCTTTGTTTAGCTTTTGTTTATTTTGTTCTCTCTAT
TATGACGTGGAGAATCGTTGTTCGAGTTGACGAAGAATATTATAAAGATG
ATATTACAGCACTAAGATTAATTGTAAAAGAATTTTAACTAAGATTTTGA
AAGATAGGAAAATAGGTAAATTCTACGCTGACAAGAAATTTCGATTCTTT
GGTATTTTTTACCAAAGGCTGGTTTTGTTTTTAACTTCTTTGTTATGATA
TGGTTTCAGATCAGCAAAATGCAAAGGTGAAATCTTTATCAGAAGAAATT
TTAAGACATGAGAAAATTGTCGAAGATTTGAAAAAAATGCTGACCCAGCA
AGCAGACGAACTTACGAGAATCAACTCTCAGAAAGCACAACAAGGTAATA
TGAATCAGAAACCTTATCTGTTAAAAGACCTAGATAGGGAGAACATTCTC
AATGCTATTTGTTGCTACTATTTACTTTGTTGCTTTTATCTGACAGTAAA
ACTAGCGAGAACCTCAATACACCTTTCCCAAGTTTTTTTCGACCTCTCCA
GTTTGAAACGAGAACTTGATACTTTTGAAGCTTTTGGTGATACAAAGTCA
TTCTGAAAATATGAGCTTTTTTTGTTGGTTTTGTCGTAGTAGAATCTTTC
TAAATTTGAATGCAAGTAGAGCAGGGTTTTGGAATAGTGTTTTTCAAAAA
GTCGAAATAAACTCGGGAAAGGTGTATTTGTGCCGGAAAAGTTATTGTAA
GATTGGTGTAAATATGGCTGTGAAACCAGTGAATATGAAATATATTTGAA
ATAAAACTCTCTGTTTGTCGGTCATGGGAGTTACGAGGCCTTATGTGAAG
TGAGACGTTTAGAAATAAACTTTATCTGTTTTTTATACAGTCACCACCAA
AGTGAGTGAACAAAAAACCACAACAACGGAAAACATTAAACCGTCATACG
CAGCATCGTCCCCATCTAGTAACTTCGTCGCTTTACAATCATCAGTCAAT
GAATTCATTGCTAAAACAGAACTTAATGAGCGTAGCATTGCCACAGCTTG
GGTAGGACTTGTTGGTGCGTTGCTGTTGATTCCCATGGCATGGATCATGG
GAAAATTCTTCTAAATAATTCAACATGGAGATGTTGAGGATGTCAGCATC
CTTCCGATTTGTTACACCAAAAACTCTTTCAGGTATGTGCAACCTAGGAG
ACGTGAAGTCATTACCAGAATGAGTACTGTTTACCGTTATTCCATCATCT
ATTAAAATGGCAGAATATATTTGAAAAATCAAAACTTAGAAAACGCCGGA
GATTGGTTCCCGTCGAACTGGCCACTGGTTCGTTTTTGTTGGCTTCTCAG
CGTTTCGTCCGTTTACTTTTAGCAAGACGAGTTTTGTTGATTTTGTTTTT
ATTTTTAGTCAATAAACATTGGACTGACCAAAGATACCATTGCAGATCTA
ATTAACTCTCAAAGAATTATTATCATTTGATCAATTATTGGTCAAAATTA
TTTATTTTAGATTTTAGAAATATATTAGTTTATTGTGACCTGAAAATATT
ATACATAATATATTTGTCGATTGTTCTTAACGTGTATTTATTTTAGAAGA
GCGTGTTATATTGTTTTTAAGTATAGATATTTATATTTCTTGTTCATGAT
GATATTTAAAGAAAGTTCTGTTACATTAACATTTAACATCTACTAGTCTA
CTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058913TCONS_00058913Clytia hemisphaericatranscript
TCONS_00058912TCONS_00058912Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058912-proteinTCONS_00058912-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:717830..721333 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.81	8.61	2.51	1.1	5.63	5.36	19.79	20.29	21.73	16.47	14.33	15.8	10.04	8.41	6.82	7.87	23.63	27.51	12.92	15.31	29.78	26.95	21.72	23.05	33.74	36.75	9.56	7.97	9.59	11.16