XLOC_037140 (gene) - C. hemisphaerica

Overview
NameXLOC_037140
Unique NameXLOC_037140
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_315:193533..197620+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037140 ID=XLOC_037140|Name=XLOC_037140|organism=Clytia hemisphaerica|type=gene|length=4088bp|location=Sequence derived from alignment at scaffold_315:193533..197620+ (Clytia hemisphaerica)
CTCGTTTTTATAGGGACACCAACCCCCCAAAGAATTGGGAACAATTTGAC
CAAGTCTCGCATGGAAAGGAAGATGGAGGTCATTGAAAGATGTTGATGCT
GTGATCTGATCATCCGATAACTTCTTGTTACCGATACCTTGAGGCCAAGA
ACAATCTaatgaaaagagaaaatattttttggtgaGTACTATAGCTACAC
TCCTTTTTTACATAAGCATACTTAGGCTGAAATtcggtaaaaaataagca
taatgctaagcataatgctgagcatacctccaagctgaaatacaaaaaaa
ttcgtGCTCTTTTTATAAAATgctgacctttttagggttactttttaaag
ctgtttgagcTTTATAAGACCAAATATTTTTGCATGCTGCTCCAAATTGC
AAGGATAACTTTCATTCTTTGATCCGAATCAATGTGCCGACTTAAAgttc
gaaattttcatgaacccaaagaacccaaagaacaaatcgaagtctaagca
tataaataagcataaattaaggctgaaaatgagattttgctaagcatatc
GAGCCTCTGGATTTTCCcgcatgcttataaaaaaaagagtgtatttctTC
TTATTTATAAAATAAATAGCCAATAGCTAACAGCTTACCCAACGGTTGTC
TTGGTTCAGGTTTATCTTCAGTATTTTCTGCAATCTCATCTTTCTTGTGA
TTGGCCACCGGTACAAGGTCACGTGACAATTTGTGATCTTCTTGATGTTT
ATCAAACCATTTATGAACAGGGAAATCATAATAATCTCCATTCTCTTTCG
TCACCGTCACCtgagacaaaaaagaaaaaattcttgatattcatggctaa
atcttttatacggaaacacacgAAAAATATCGGGTGTTTGTCACAAGTTT
CATTGTTTACCATacttacctataacaatccaaTTGTTCCCTTAACAATC
CAAAAgcgccaaaatcgcaaaaattcggATATTGCTGCGGTAAAGCCact
tttttgcgattttggcgcTTTTGAAATATTAAGGAAACTATTGGATTGTT
ATAGGTACGGTATATACAAAACTGCTGGCAAACGCCCGTTGTTTTTGGGG
TGTTTCTGTATAAAAGAGTACGTCATGAATATTAAGAATTCGGAAagtta
aaactttttcaaactaaATTAATATCATCAGCGAACCACTGAATTAAGAA
GTCATGTTTGACAATTTTCCTGAGGCAATGAAGCAACGAATGAATGACCG
CTTTAGTGAATGATGGCCGACATTTTGTGGTTTAAAGGTGGATCCATTTT
TGAAATTGTGACGTCGACGTGATAAAATTAATTGACGCCATTCAATCgat
aaaatatttgacgtcactttttaaaCCATCTTTTATCTCTGAATGCCGAG
GTGTTCAGAGGCTCGTTAGAAAAAAATAGTGAAATTTCGCTAGAATTGTG
TGTATTAGAGCatatttttgtattaaaaatgGATTTTGGAGCGATGGAAA
TGAGTTGGGAGGAAGGAGATGTCATTTCCAAAATCTTGAACGAAAATAAA
GACGAAATGTCgttcaaaaatgaagaaaaaacacCTATGAAATCTTTGTA
TgaagaatttttggaaatcggtGAAAAATACGAATTTCCTCCAAGAACAG
TTGAAGTTGGAGAATTTAATTGTGTTGAACGTTCAAAAGAAACAGAGGTG
GCTGATGAACAAATGATGAAAACGAACGCTGGACCTTTGAATCGTACttt
gaagaaaacaaagaaaatgttcaatcCTTCTCAATTCGAAACCAGTCTAC
CTTCGAAGCTTTCAACAAGAACTTCAACAACAAACTCAGCACCTTTTGTT
GCTAAAGCTGAAAGAATTCCTTCAGAAGAAAGTAatttatcaacaaaaac
aaacaaacatgtAACTAAAACAGTTGTTCGACCTCCGCCAGGCTTTCCTG
CGAAACCAAAAGGTGAGAAACCGACTTCAAACACCGTCCAAAGATTATTG
AATCAGTCACCTCCACAGGAATTAAAACCAACAGCAAACCATTTCAAAGA
CATTCCAAATATCCAATCAAGCATCTCCAAAACAAAGCCATCCAAGTTGT
CAGGAATGATGAAAGATTTTGAATGTTTGAGTGTGGTGATGGATCAAGAG
ATTCATAAATATGAAAATCAACTTTTGACCAATAGAACCAAAGATGAAGG
TCGCATTGATATGATGAAAACATTGTATTATGAACAACAAGAAAAAGTGG
AAAAGTCTAATCTCAATCATCAacagaaaatcaaaatgttgGAAAAACAA
CACCAGGCGAAAATGCGTGAAATGGAACTCCAGCATGAACaagaaattct
gaaattgaagaagaattTAAAGAAGGAGAAAACAGGAGTCGAAGAACTTC
AAATAGAATTTTATAAATTGTTGGATGAAAGACAGCATAAAGTAGACGCT
TTGAATGTTAAGATCGATGATTTACAATCTGAATCGTTGGATCAAGAAAC
TCCGCCTCCATCAGCTTCTGGTGATGATGATGTTAAGAAATTACAAAACG
AATTCAACAATGAATTGTTTAAACGTGAAGAAGAAATTGATCGATTGAAT
GCTACCATCTTTGATTTGAGATACAAACTGGAAGCTTATGAAGAAGGAGG
ACATGACCATATTGCTTGGGAGGTAAACAATGAGAATCAGTTAATCAACT
TAAGCTCATTCACTATATTTCACTAATTTTAGCGATCTCTCTATAAATCT
ATCTGAGATTTTTGTATAACGTTGGTAACCAAGTACTATTTTTGAAAACG
ATATTTTGTTATAGTCAGTCTTTGCCANTGGTCTAGGAGTCGTCTTGTTA
GAACCGTCTTACGCTGTAGTTTATACTGCATGCTAGCTTGCGAGACACCG
ACACTCAGTTTTTTTAGATCAAGTGCAAAAATCCAGCGTGAACCAATAGG
AAGAAAGGCCAATGCATTCTCGCTTCATCAACGATGGATGTATTGTAGGG
ATGTAGTGGAGGCTAACGATCTGAAGGAATGCGCCTCGCATTGAATGGAC
TGGAAACGACAAGCGAGTATTCAGTTTGAAACCCCGCAGGGGCTATGAGA
TAACACTCTTTGAtggaaaatgaagccacttatttcccatttgAAACGAC
GCGTGACCAATGTGGTTTTAACACAAACGCCGATTTGAAATTAGATTCTA
TCACCAGAAAACTATGTCTAGATTCAAACGTCATTCCAAAAGCGGAAAAA
CAAGATTCTTATTATCGAATTTTCCGAGTGTTGGCTATTTTCCACgaatg
tttaatttttaagatacTTTCTTCAGATATTTAATGTGCAGGTATAACAA
TTATGGCGATCGGTTTAACCAGATAGGGATAGAAACCAAAGCAAAACTAC
GAAAGATAAAATTCGACATTCCGatattttaaaagcaaaaaaagtttacT
AAGAAATGCAGTTCTTCCCTTTCCATTTTAACAGAATGAAGAACTGACAG
AGAAGTTGGCGATCAAAGATGAATACATTTCCACCTTAAAATTGCAAATT
GAAAATCTTGAGAAAGTTCATCAACAGGATGAATGGGAATTATCACAAGC
CGACGACAATTTGGAGATGGTTGAACGAAAAGCCACAGACATGGAAAGAA
AAGCTACTGGTAAGTTTCTGAGATCTTTTGGACTGATTTAAACTCGAAGT
ATCACCGTCTAAAATTATCGAATTATGGGTGATCTTCTTGTGCAATTCAT
ATTCTTTCACACAAAAAGACAGTTTCGGAATATGTACTCTTCACTCTAAA
AACTTGAAGTATGATAGTTTTGATCTTTGAATTTTCTATCCTTTCTCATA
GTATTGATGACAAAAATGAAGACAGAACTGATCAAGGAACGGCAATTAAA
CCAACAATTACATCAACATATCGCTACGATGGATGCAAACCTCACTCAAA
TCGCCCAATATAATAACGTCCTTCAAAAGAACAAGGAGCTTGACCAGGCT
AACCGAGAAAAACTAGCCCGAATGACAAAACGATCAGTTTCTCGTAAATC
TTCGATCGATCTTTCGAATGATGTTGTTATGAAGTCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058958TCONS_00058958Clytia hemisphaericatranscript
TCONS_00058959TCONS_00058959Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058959-proteinTCONS_00058959-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_315supercontigscaffold_315:193533..197620 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29	0.02	0.52	0.86	0.78	1	0.94	0.86	0.55	0.48	0.23	0.83	0.38	0.47	0.23	0.76	0.17	0	0.2	0.1	0.32	0	0.36	0.34	1.28	2.12	0.41	0	0.31	0.21