XLOC_037262 (gene) - C. hemisphaerica

Overview
NameXLOC_037262
Unique NameXLOC_037262
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_319:103293..113489+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037262 ID=XLOC_037262|Name=XLOC_037262|organism=Clytia hemisphaerica|type=gene|length=10197bp|location=Sequence derived from alignment at scaffold_319:103293..113489+ (Clytia hemisphaerica)
cggtaattagttattagaaagtaaacaaaggatggcgaaaaagatgagca tatttatttttattataagtattttctttataagaatcaaatcaataact cttgattgaaggcaatatatctttcggtaattagttcttacaaagtaaac aaaagatggtgaaaaagatgagcatattcatttttattataagcattttc tttataagaatcaaatcaataactcttgattgaaggcaatatacctttca gtaattagttattagaaagtaaacaaaggatggcgaaaaagatgagcata tttatttttattataggcATGTGCTTTATaggaattaaatcaataactct tgattgaaggcaatatatctttcggtaattagttcttacaaagtaaacaa aggatgtcgaaaaagatgagcatatttatttttattataagtgtctactt tataagaatcaaatcactttcagatttttttgcgttttcactgtgattaa tgtgagcgataacttctctttttgagatgtgagcgaccatctatcccatg tcatctcaaaagtaaagttgaaaccaagctttcttcctccaacttaaatt ttatcgatgaaacgaatttaaaatctacacatgcgtgattttgcttactt agggatatttcgataggaagctctgcggggcattcttagcgacagctact tgctagtatatgtcgataatgaccttcattgctaaggaaatatttagtcg caattttgcaaTTCTTGTTCctaataattttcaaaactttcactataaag cattaaaaagctttaatcAGCATTTAGTCGTTATAAGCATttgtagcggg tggcagttagtgaaagctatggctagtacAGCATTTCAGATTGAAGATTA CCATAACAAATAATCACTGAGATCATGTCGTTGATCAATATCTTCGAATG TCGCTCCAAACTtgctgaaaatgaaatgaacCAATATTCGTTGATTCCTG CATTACTGGCAGTCTTGGTGTTGTATGCTTTCGAATTATACAAAGAGCGA AAGATTAGTATCATACCACCATTTGAGACACTGGTCAGTACAAGctccaa tcagaagctcaccATATTCGCGTTTGGTAAGTGAAGTCGATACATTATTC TTTTAATGGAGAAAATATGATACCTTGTTGGGGAAAGATAAAGGAAacga gaaaaagatttttctaactacaataaaaaaaatagtttaaaagAAGGAAG TTGCAAAAAAACGTTTGCAAACCAGTAGGAGAAGCTTACAGCACTTACCC ATATTCTTAACAATCAATTCATTAGAGCATGATACATTGTATTTTATGGG AGGACAAAAGCAGTCCTTTGCCATACTGTAAACACCGCCATTAAAATTCG ATGAATTGGTACTCAAGTCAGCATTAGCATTAAACATTGTATTTTTAATT GAATATAAAGCCCAAGAGGAATCCTCAACCTTACCCAAACAAGAAAAAGT TACACCTCAAGACTTGTGCCGCATTTAGGATAACGGATTGAATATagcgc tttctttgttttaacgcatatttttcaaaatctggtgattttattttcaa tccagTCTTTGTCTGAAAACCACACGATTCGTGCGTTTTTGATGGTAGAT CAGTGGCTCAATTTCTCATCCAAGAGATTTCTCTCAACTCTAGCCTGTGG CGCATCTCAATAccctactcttgtctcccgaatagacgcccccccgctaa ttgttaagagaaaaaaatccatccctccgctcttattaagaccccccccc cccccccttttttttaaaaaaaaaaaatccccccccccccccttattaag accccccccccccccccttttttaaacccccccccccccccgctaattaa attcgaataattcaatattttattacagtgtagatagaccttaaacttgt caaaattttcttttttgttagtATTAGTTCTTCTTTTATGTGTTCATTTG CTAAAGATTCTTTTTGCTCCGGCCTatgagcctttaattctctcttccga cggtcaagacatttttttttgtttatctaatccgatgatctattccgatt taataaaaatggATTATCTGGATTCCGATAAATATTGTGATTTTAAtatt gacctttatataccctggaccaagctggcagatattgcttggtccagggt tatataaaggtccgTGGATTTTATTCgccgaaagtatttagaaaaagatg gatAACAGACGAGGGCTATTTGTCACGAGTGTTATAAGCAAAATCTGGGA AAAACTAATCCTAAGTGAGACGAATGAAGATATTTATATGGACATACATC AAAATGGAGGACAAAAAGGAAGAGGCACACTGGACAATTTGATGGCTATA CAAACTATAATCCAATCAGCAAAATACCTCAACCAAGACGTGTACATCAT CTTTGCTGATGCATACAAGTGCTTTGACAAACTATGGTTGAAAGACTGTC TCGTAGATCTGCACGAATCTAGAGTCAGAGAGAGAGAATTGAGTGAGATA TTCAATCTCAACAAAAAATCCAACATCATCATAGAGACACCGGCCGGAAC ATCACAAAGCATCACAATGGGGGAAATAGTCAAACAAGGCACTGTACTAG GCCCTCAACTCTGCTGTGCATCAACCATGAAGATAAATGAAGTAGGCCCA GCAATCTCGACCACAGTATCAACGAACCTACAAATAGCTGGTCTCACATA TGTTGACGACATAGCTGGAATAGGCTCAGAAAACGTGGTACTCAACACTT GTGCATCACTAAAGAAGATGGAAGAATTAAAACGATTTACGTTTTCAACA TCAAAGACAAAGATCATGCACATCAGCAAGAAGAAGACTTCAAAAGAGAT TAACTATCAATTAAAGGAAGGAATGATAACTGAGTGCGACGAGTACAAAT ATCTTGGTAATTGGTTTAATTGCAAGGGAGACTTCACAAGACAGCTACAA GAAATCGAAGAGAAATCCAAAAAGATAATGGGAGCCATCACCAGATATGG TCAAACGACAAGGACAATGGAAATAGGAACAAAATTGTTCCTATACAAAG AAACTGGCGTCAACACAATATTTGGTGATGTAGAGCTGTGGCCAGGGCTG ACTAAAGAACAATCCCAGAAACTTGAATCAATACATGCTACCAATGTCAA ATCCATCTGCGGCTTACCACGGACAACACCAACCTGGGGAATATATGCAG AGACTGGTNTGATGGCTATACAAACTATAATCCAATCAGCAAAATACCTC AACCAAGACGTGTACATCATCTTTGCAGATGCATACAAGTGCTTTGACAA ACTATGGTTGAAAGACTGTCTCGTAGACCTGCACGAATCTGGAGTCAGAG AGAGAGAATTGAGTGAGATATTCAATCTCAACAAAAAATCCAACATCATC ATAGAGACACCGGCCGGAACATCACAAAGCATCACAATGGGGGAAATAGT CAAACAAGGTACTGTGCTTGGCCCTCAACTCTGCTGTGCATCGACCATGA AGATAAATGAAGTAGGCCCAGCAATCTCGACCACAGTATCAACGAACCTA CAAATAGCTGGTCTCACATATGTTGACGACATAGCTGGAATAGGCTCAGA AAACGTGGTACTCAACACTTGTGCATCACTAAAGAAGATGGAAGAATTAA AACGATTTACGTTTTCAACATCAAAGACAAAGATCATGCACATCAGCAAG AAAAAGACATCAAAAGAGATTAACTATAAATTAAAGGAAGGAATGATAAC TGAGTGCGACGAGTACAAATATCTTGGTAATTGGTTTAATTGCAAGGGAA ACTTCACAAGACAGCTACAAGAAATCGAAGAGAAATCCAAAAAGATAATG GGAGCCATCACCAGATATGGTCAAACGACAACGACAATGGAAATAGGAAC AAAATTGTTCCTATACAAAGAAACTGGCGTCAACACAATATTTGGTGATG TAGAGCTGTGGCCAGGGCTGACTAAAGAACAATCCCAGAAACTTGAATCA ATACATGCTACCAATGTCAAATCCATCTGCGGCTTACCACGGACAACACC AACCTGGGGAATCTATGCAGAGACTGGCATATGGCCAATAAAATATACAA TTCTACACAAGAGGATCATGATCATACACAAGCTAATCAACGGAACTGAT CGGCTTGGCAAAAGGATCCTTCAAAGTCAAATGGAAGAAACACATACAAA CAACTGGTACAATGAGACAACCAAAATGACTGAAGAGATTGGGTATGATC TAAATGTAAAAGGAATGTCAAAATCAGAAGTAAAGAAGGCAACCAAAACT TTAATCAAAGAACTCCTCCAGAAAGAAATTGAGATgcaaagaaaaaccaa aacagAGATGAGGTACATCATCAAATTTGAAGAGAAAGAGTACTTAACCA GGTACCCACAAGAAGACATCCAGATTATGATGCGAGTGAAATTAAATATG ATAAAGGCCAAAGACAACTATGGAGGGAAGGGAGAATGCCGAATCTGCAA TACAGAGGAAGAAAACACTGAGCACCTATCACAATGTGAACAAGTAGAAG AGGAAAAAGTAACGGAAATGAATATTAAATCAGACAAAGCTGTATGTGAA AGAAAGGTGATCAATCGATTTAAGTGGTGAAGAAGTAAAGTTCGAATCTC ATTGGCTTTCCACTTTTTCAAAGATCCAGGCTATTTATTATCAAAGATTC AGGCTATTTAATTCCGTATTCTAATTCAAAGTTGATAAATTTCAGAATtc aaatccaaatcttgtgttctatgtgttcttgtgtccgattttatcaatta cagaattcccaaatccaatcttgcgttctctgtgttcttgtgtccgattt tatcaattacagaattcaaatccaaatcttgtgttctccgtgttcttgtg tccacaatgggaaaaataaattttaagatggtaatgactgaatcttgtgt tctctgtgttcttgtgtccgattttatcaattacagaattcaaatccaaa tcttgtgttctatgtgttcttgtgtccgattttatcaattacagaattcc caaatccaatcttgtgttctctgtgttcttgtgtccgattttatcaatta ccgAATTCccaaatccaaatcttgtgttctctgtgttcttgtgtccgatt ttatcaattacagaattccCAAATCCAATCATGACGAATCTAGGCTGAGA GAGTATGTCAAGCCTGATGATGAATCTAGCCCGTGAACATTTTTAGCCTG AATGACCAGTTCTTtatcagccaatcagattgcttctTTACTTACTTCAC CTTAACCCGAACAAAGAATAAAGCAATTGGAAGAGAAAAACCTATCCTGC ACTCAACAATCGATGTGCCTATTTTAATCAAAATAGAGTGGATTACgtca agaaagaaagaaaaatggctgccgaaagtgggctagctgactgtgtagcg aatgggcaaatctcagtgaaaaattgatcattttcatcattattcatgat gttttggacatgatttatgagaagtttaaTGCATAATGgttctctaacaa tgtggaaagactttggagaaattttggccatgaatcgtcagctgatcgag tgcttaaatcttgcatatggctaacttctcttctAGTTCTAGAcgcacaa aaccataaaactctgtaacttggaaatgaaactttcaaacacacagccat tggaattcaaaagagaatactaaatttacaacattacagtgcaaatttga aaacgatctgagtaatTTTTAtggtgttatgtgtatggctgaaaatgatc ctgttttgtattcatcattgttgNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgttc cttttgatttttcaaacctgacacagattttttacaaacatatcattatg agaattcagtaaaggatactaaaacacaattcctgtgtaaatttgaacaa gattggagaaattttcacagtgttatggatgaaaatgatcgttttggact ttgtcgtaatttcatcacggctggcgaccgttccttttgatttttcaaac ccgacacagatttttttacaaacatatcactatgagaattcagtaaagga tactaaaacacaattcctgtgtaaattttaacaagatcggagaaattttc acagtgttatctgatattttttggactttgtcgtattTTCATACtcacgg ctggcgaccgttccttttgatttttcaaacccggcacagatttttttaca aacatatcactatgagaattcagtaaaggatactaaaacacaattcctgt gtaaatttgaacaagatcggagaaattttcacagtgttatctgatatttt ttggactttgtcgtattTTCATACtcacggctggcgaccgttccttttga tttttcaaacccggcacagatttttttacaaacatatcactatNcttttg aagatttttaaacccgaaacaggttttttccaaatataccactatttatt acatacacactattgtaccattttatttggtttatcctactctcttccaa gtattatcccaacagaaaaaataatgcttagctaaaagccgtggcctcta atttaggctatttttctccccaaaattttatccggacaatcaaatcaacg gcgcatcatggcttcATATTCATTCAtatattggcaagtttagaaaaaaa taaatttataagaacttggaaatattgactcctaaatgtttatctccttt agctccaattgtgaactttttagtcgaggagGAGTGGGCGGGGGaggggg tggggttggttctttaggcaagaaagtgcatgtgtaatcacttagaagag ctaaactttcagctggtttatttatattcgttaagattatttctcatNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccctcttatt ccaatccccccgctcattagaatttagaaaattttcctaccccctgctta ttcggaccccgccgtctattcgggagacaaaaGTAATCTGGAAGTCTCAA ATGCAGCGATCCttgttttataaaaaccactCTTCATGTATGAATAAAAT TTGatctgatattttttttctcaacatTTACAGGCACGATGGCTAACTCG ATCATTCGTTTGATTGTCACAGCAAGCCAAAGCACTCAAAACGGAACATG GCTAGAAGTGACGAAAGGTCTTGGTTTGTTTCTGTTAAACTTTCTCATTA TCGCTACAATCAATTATCCGACATTCTTATGTATCTGTTCCCCATATAAG TTTGTGGCAGCTATTTTGGGTATTATGGTCATTTTGCAGAAAATGGCTTT CTTTTTCCTTTCAATCACCAATCTAAATTGCCAAGCTAACGTGAATCAAG GATCAGCTATTGGCGTAAAGATTCTCCAATACATACCGACTATCATTTGT TTCTTATTGGTTCTCTATAAATTCATCAGACAATTTCTGACATATTTGAA GCAAAGAAAATTCGGGAGGATCGATACTCAGAATTCTCTTGCCAACGAGG TTCATTTAAATCACTTGAAAGAACTGTTAAGAAAAGACAAACTACCAATT CTACCTCCAGCAAAGATTCAGTGGTATAAAAAGCCATACAGAAAATGTTT AAACGTCTACAATAGCAGCGTTCAATACTCGAACCTCTTCTTGTGCTCTG TCGCAGTAATCTTGATCGCATACTATTATTTCCTTGTTGCTTTCATCTAT ATTGGAGCAAGCAACATCGATAAAATTACACCCTTTTTGGAGAATTACAA TGTTACCACAAATGCCATTTTAGTGGAATTAGTAGACGGCCTTTTAAATA GTTACTTTATCGCTATGGTACTGACCTTCATTTTCTACACATGGTTGCTT CTGGATCTCCTACAATCTCATCAAAACAATCTCCGTCAGATATTTGCTGG TAAACATCAAATATCGATCGAGGAGCGCCTTTCACCGCAAGATTTAACAC TTTACAATATCATCTTTCCTGGTTATTTCATCTCCTACATGATATGGGGT GTTATTGTGTTCTTTGCAGTGACATTTATTTTGGTATTCCTTGTATATGG TTTTATCTTGATTCTTGTGTTTCTCCCTGGATGGATAGATATGATTGTCG CTATTCTGAAGTATCTGTATTTGGTACTAACACTGCCTTTATTGGCGTAC CTTATTCAGTATGTTCTGGTTCTTTTCTACTTTACCGACCGAAAATCCAA GAAATTAACAATGCTTCGGAACAACAATTCGTATCATTTCGTTATGTATG TGTTTTTCTTTTACAATTTGATTGTTGGTGTTGTATCCTGTATCAAACGC TCTATCACTGGTCTTTTGATTAGCTTACTGGTCTTAGGACGTATCGATCA AACGCCATTTGCCTTCTTAAAGCACTACGATACTGGCTACTGCGCTTATC ATGGTTTTCTGCGATTACAAGGGGTGTACAAGAATCCTGTCATGAGGTGT TTCCTTCAAATGCTCAACGAGTCCATAGACAAGGATAACTTGTTGAAAAC AATCGAAGATGGCTTTCCCAGGATGCATCACTCTGGTGTTGACGGTTTCA ACACTAATATGTTTCCTCAACATACACAACCCATCACCTCTAAAAAAGTT CGTAACAGATGGTTTTTAGCTTACACCCTTCTCCGTAACCCAACACTGGT CAACGAAAGGCGCCGTTCAGGGCGTAAAGAGGCGGGAGATCTCTTAGTGT CATTCGAAGGGGAGGGTATTGAACATAACAATGAAAGAACCAATAATAAT GCTGAGTCAGATAATTATGACGGAGGACAAATTGAATATAGTGGTAAAGA TCTATTCTTGATTTGAAAGAGCATTAatcctacacgctttttttataaga atggtgtaaatccatttcatcatgaatcatgaatattcttaacttttttt ggaaaatcatcttaaaatattcctacagcattcttaggttaggatcctga ttcagactagatttaacatttagtacatgcGTCTTACTTGGGTgtaattg gtaatttataattaaaaatgttctaaaaatgacatttttagcttgagtag ccaaaCTCCATAATGGTGATAtacttagcattattcttaattttttggct attttcatcatggactcttataaagtgtattcttataaaaaagcgtgtac atcgGTGGTTATTCTAGGAGACATTCTATATGTCACACATTATCACAAAC AGCACCAGAAACAAATTTCTGACCATCTCCTCGGCGACGGACTATAAGTT ACTTAGTATGTGTTTATAAGattttattgattatttttaaagagatttta cgtgatttttagtgtttttttttacatttagaattttaaattcattacag aTATTTACGGGTATATGAGTCATAGCATAAATTATGataattttact
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059165TCONS_00059165Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059165-proteinTCONS_00059165-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_319supercontigscaffold_319:103293..113489 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.95 0.96 1.11 1.3 1.77 1.03 2.37 2.37 2.04 1.86 2.01 1.9 4.08 4.53 9.57 7.07 3.63 3.19 4.37 3.81 3.63 3.17 3.69 3.98 3.47 4.12 4.36 4.76 3.09 2.53