XLOC_037368 (gene) - C. hemisphaerica

Overview
NameXLOC_037368
Unique NameXLOC_037368
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_326:394189..398315-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037368 ID=XLOC_037368|Name=XLOC_037368|organism=Clytia hemisphaerica|type=gene|length=4127bp|location=Sequence derived from alignment at scaffold_326:394189..398315- (Clytia hemisphaerica)
CATCAGGCGGAAAGGTAACAATGAAATTACAATCAAAGCTAGGATGTACT
AAATTTACTGCTAAAGTGTAAAGAATGGTATAGCTATTGTGGAGAGCCAG
GCTGGTTTGTTGCCCCGTGACATATCTTATAGGACTAAATCTAAATGGGT
AAGGGGTTGTTTGTGATACATTTTACACTCAGAATTCCATGTTTTTTCAG
ATGGTATGGTTATTTAGATTTTTTTAAATCAGCTGTTTTAATAGGGTAGT
TCTCATTTTTGTAGTTTTGCCTATAGCGTCATACTTTTGGTCACAAAAAT
ATTTCCCTGGAATATTTGCTGGTATGTGGCGATAACATTTTAAACCGGTC
ACAGATTTCTGTAAAACCTGAGGGGTATTTGAAGCTTTTCTAAGAAGTGA
ATATCCCAAAAATTATTGTTGCTATTGTTTTCAAAAATCCGCGAAGCTTC
TGATTGGTCAAGCGCTGAAATTCTATTTTAATTTCACGTGACCTAGGTAG
GATTTCCTACCGAGATACCGGCACACTTTTCAGCTAAAGCATTCTATCTA
GTCCTGCGGGCTTTAAAAATCTGTGAAACCGGTCTGGCATTGCTCTTTAC
AGAGGAGTTTTTGTTTAACTAGACTAACTATGACAAATTACACTTCCAAT
ACGAAAGTTGACTTTTTTATGATAAAAAAACCAGAAGTTTGAATAAATTA
TCATGTCACTGGATCATTGTCATTCGGCTACTAATCCACTTATCTTGATC
AAGGTATATTAATAAGATTGCATTACATTTTTGTAGCATTTTTCCTTTCG
ATGTGCAAGGCTGTATGTGTGGTATAAAGTATTCTGCAGATCAAAGAAAC
GGTAAGTGTAAACTTAAAGGTTTTGTTTTTAAATAGGAGTGATATCGTTT
GCTTACTCATCAATTTCAATTCACAACCTTTTTCACATTGGATTGACACG
GGTGTGGAGCAAGATTGGTCAGAAATGAGAAAAAAAACAACATTTTTTTG
CTTAAATATCAGCACAATATAACAATAGCAAGACTACTGTCCTGATATGA
AATATGTGTCTGATATGAAACGAGAACACTTGTAAAAATAAAACCTTTAA
AGTCAGTCGCTTGGTTTAAATGTGCACTATTTTTGCTCTTATGGAAACCG
CTCCTAAGTGAACACTGTCATGGTTTTCACATGGTAACAGATGTACTTTT
TAGTTTCATGCATGTTATTTGAGAATTCTCAAAATGTAGAGATGCTTTTT
TTTGAGTTTTAGAGTACTACAGGGTGTTCATAATAAAAGTATCGAGTCAA
ACAACAAGTAAAACGTTTTAATGTGTATTCATGATATTCATGACGTAATG
TTTTCGACGGAAATACCCCGGTTTTAGCCAGTAGTGACAAATTCAAACTA
GACAAAAGTTGTAAATAATTTGCCACTACTGGCTAAAACCGGGGTATTTC
CGTAGAAAACATTACGTCATGAATATCATGAATGCAAGGTGTCCTGAAAA
AAAGTCCTGTGTCAGAACACGACTATACAAATAGAAAAGTTTTTGTGTGT
GTTTGTCAGTATTTACGTGATTTACTATAATACGATCTTTAAAGTCTTTT
TTACTTTTTTTGAACGAGACGTTCATTAAAATATTTCATTACACAATTAA
TATCTCGATATGTTTGTAAGTTTATTGCGTTTCTGTTTCATCGTAGCAAG
TGTTAAAAGTGTGAATAATTTTGTTGCATTAAAGTGAGAAAATAGACATA
AACACACAAAAAATCTACTTGTAGTCGTGGTCTGACACAGTCTTTTTTTT
CGCGATACCCTGTATTCACAAAATTGTATCTCGAATTCTCACTTTTTTTC
TTTGACTTTCTAAAAACGTACATTTGTACAACAAAGAAAGAACTAAAAAG
GGCCTGTAGTTAAAATTAACTTTTGTAAAAATCCTATATGATGGAGTACT
TTCTTATATTTTGGCGATAACAGACAAAGGAGACAAAGCCCTTCTACAAT
CATGGTCAAAATAGAATGAGAATTCCGGTTATTTTAACGTTTTTCAAGAT
TTAAAGTTCTGGCGAGAAAGTCGATTTTGGGCTATCTCTTTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGCTCTACTCTTCAAACCTACTTTAGAGCACTTACAAAT
CGATTGTGGTTTCAAAACTTCCCGGTGGATTTCCCTTTTTTCTCAAATAT
TACGACCATGATTGTACTTGACATGTTCAAACTCGATATTTCTTCCGGAT
ATTCTGTACTGCGAGGAATTTTTTAACCATCGTTATCCCAGAAATGAAGC
CAAAAACCAAATGGGGTTTTCCACTTGGGAATTCTTTTGGCCTTTTCGTT
CACCGTGGGCTTGATGATATTCCACTCTGGTTGTAACATAAGGTTTTGTC
CCGGGGGGGGGGGGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGAG
TCCCACGTAGGGTCCATTTTTCGAACCTCAGCAGAGCACCCCCGTCGGTC
AACAAGGGTAGTACCCCCCCCCCGGGGGTTTTGTTTATAAAACAATTTTC
TCGCATCTCGCAAGTAGGAAGTGAGTTGTTATAATCGAGTTTTAATATAA
ATCCGTTTTTTTTCAGGAACACTACTTAAGATGGTGATACAGATATCATT
TCGTCCAATCATTTTACTTCTGATTGTATCATCTTTAATCGAGTCTGGGT
CGGCTTATTATTTAAAGAAGGGCTTTCGAAAAACAATCGATAATGATAAC
AAAAGAAGTTTTAAACCAATTAGACACGGTTTTGATAATGCAGATGAACC
AATCAGAATTGATTTAGATTCTCTACAACCAATGAGAAATGACCTTAAAG
ATTTTTATCAACCAATCAATGAAGATTCAATGGACTTTAAGAAACCAATC
AAATCAAATCATTACCCTTTTCAAACAACAAACAAAAAAAGAAATTTCAA
TGAACAGACCGTAATCGAACCAATAGAAAACGAATTATTGGATTTTGGAC
CAATCAGTGAAGACCTGAGTCAAATCAAACCAATAAAAAACGACTTCTTG
GATTTTAAACAAATCAGTGAAGACCTGAATCAAATCGAACCAATGGACGA
CTTGGAATATGACAACGATTGGCGTAAATGTGGACGAAGATGGTGTGACG
GGCAGTATCGCATGTGTGACTCTGTTGCAAAGTCCCCTCGGGAGCAATAC
GAATGTAATATTGAGTTGTGGAAATGTCAAGACATCAGATGCTAATATCA
GAAATATCAGTTGAGTAGGTTGAATAAAAGATAAAATAGGTATTTTTTTA
GTATAATAACTAACCAGGACAATTTGATTGTATTTGATATTTTTCCAATA
ACTTGTACTTAATTATATAATCTACTTGAACTTAACATGAAGATATGTGC
TCTCCCATCTTCAGTTCTTTGGATATTAACGTGTGCGCGACTAAGTTGTG
GTGTTCATGTTACTTAAGGGCTCTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059361TCONS_00059361Clytia hemisphaericatranscript
TCONS_00059360TCONS_00059360Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059361-proteinTCONS_00059361-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_326supercontigscaffold_326:394189..398315 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.2	8.07	3.16	1.81	0.8	0.07	0	0	0.09	0.23	0	0.07	0	0	0	0	4.29	4.83	0	0	10.96	9.85	8.88	12.04	3.77	6.96	298.03	237.66	1	1.15