XLOC_037455 (gene) - C. hemisphaerica

Overview


Name	XLOC_037455
Unique Name	XLOC_037455
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_329:22542..31130+

gene from alignment at scaffold_329:22542..31130+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_037455 ID=XLOC_037455|Name=XLOC_037455|organism=Clytia hemisphaerica|type=gene|length=8589bp|location=Sequence derived from alignment at scaffold_329:22542..31130+ (Clytia hemisphaerica)
TAGTTCTATCACTGAAATGCTACAAATGTATACATGGAGTGAATTGCTAT
AACAATATGACCTTGGAGTGTTCCACGAAAGAGAACGCGTGTTTTACGCA
TTATGAAACAAGGGAAGTTTATTCGTCACCAGACTACCAAGATCATATTG
AGGTATATGTTCATCAAGACTGTGGTACTGAAAGCGAACAATTTTGCAGC
GACGCCGAGATGTGTGGACGTCGTGCAATCTCAGTTGGATTTGTCTCATG
TAAGGTAAGGTTGTTTCAGTGTATCACTATAAAATATGGTATATAAAATA
CACCCTGTATGGTCGGACGCCTATTTCTGCAGGGTATGACACTTTGATTT
TAGAAATCACACTGACCGCTTATTGGAATAcccacttctcacagacccgt
tgttttcaagtcaggaaattcagtggggatgggaaaaatagcatattatt
ttgcagtgaggattggcttGTTATTGGATTATTTTCGGTGGAGATaaaaa
ttttcccaccggggacgatatttcggccaatttttccagtgggaaggagt
CCCACTCGacagggtctgtgagaaaggggtgttttgNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAGGCTTCAAAA
AAGTTTAATGTTATTAAAAGGAGCGTATATAGACGACCTTGTAAAAATAT
ACACTGTCAAGTCCTGTCAAAGCGAATTGCAAAAAATAGTGATTTTACAC
ATTTGATATCCATGTAGAAATGCAAGTTCTTCATAGAGAATATNTTTGAT
ATCCATGTAGAAATGCAAGTTCTTCATAGAGAATACAGAATATGCACgcc
ttttcttttaaaagaataacttccataagaatatcagggtgagatttcag
agttagaacaataggcctattgtttagaacaatagaaaaataagaataat
gctcaccctcagccaaaaattactattcttataaaaagaaaagcgtgtat
tctatactgactgaagactgcctgaaacggcacgaaactccgagtatcgg
aaaaaaaatttgtctttATTCTTGGCTGATATACCACTCTACCGATGGTA
TAGAACACTTTCTTGAATATATTCTATACATTCTTTGAACCCAAAAGTTC
CCCTATTACTCTCACTCATCACCTTCATAGATGAATTGTATGAAGAAGGC
GATGTTCTCGAAAACACTTGCTACCATACATGTCCGAATGAATGCGTCCG
AAAGTCGTACACCGTCCGAAAATCTACATACCGAATCGGAAGTCAATCTG
TATatgaagaaatgaagaaaacaatACCAAAGTTCAATAACAGAAGTATC
AACGagattgaaaaatatatcaggTCAGGTAGATAATAATCAtgtcggcg
atccaaaaaatatcagcaatctgattggttaaaaagagtataATATATCt
cgtattttacatgtacaaaatataaattgacgagaAGATGTTGTTGCATG
TAGAGATATAGTAGCAATCTAACGCCattttgctacaaaagtgccctgcg
cttttttataacacaaaaagtgcatttttgggtcaccgataaaNNNNNNN
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AAAATATGGTGGTATGGCATTatggtatggcgttatggcggtatacggaa
aaaatcggcgggagagttttgAAGAAacgactggcaaactctaccggctg
taaactattttcggcaaaaagcccgtttgcaaattttcttcggctttggg
cttatttcttagatagtgatttgtttTAGACTATATAGCATAGTCTAGGA
TAATACGAAAGTTGAAAGGAGCATAGACATTTTGCTTGTCTCGTGCGCAG
GAAGAACTGAAAACTCATGTCTCGTTTTGAAACGATTATCGAATttataa
aatatcataaaaaaatttaagtttcaCAAATTTTACTCAACAACACTTTC
GCGCTTTTctgaaatctttatttttaatgGAACTTTTACGAATGGCTAGG
GAAAATGAATTAAAGAATAATTTCAAATCTGATCCGGGTAATCTTCTTCC
CCTTGATGGAATAGTATGAGACGAAAATTGGTGAATATCCTGTTGGTGCT
ACTCAATGTATCGTCGAGAGGTAAGGCTGGCAATTTTCTGTGCTTATTTA
CGGCACACCTAGACACTTTGTTTTCAAAAGAATCTACATACTTTATATAT
ATCTAATaagaacacccctgtgtcacagaccattgagtttaaagcccgaa
gggctagaatagaatctctaacctttctcaggcaagaaaaagtgaagcct
taaaaaatgcactgtatttttgacgacagattNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaatctagca
attcctttgtttacgattgatatttttttcgaaatttagcggtaaatttt
agtttcaatctgtcatttgtgtaaaaaccaggcgatcCGCTCAAGGcagc
gcaactttggtaggatttgttggcttcaaatcctaccaaggagattcgat
tctagcccttcgggcttatactttattgtcacagacccgctgagacccca
gccccactgggaaatttagccaaaattttgtccccgatgggaaaataccc
tggaatttcagccccactggaaaaatgaCTTTTATTTCCTCCCCACTCAA
AATTGAATGTTTAAAAACTGCACTCAAAAATTATCCCCATTCGATTTTTC
AgccttagaacaatagaattgctatatccccattgggattgcAATAGGAA
aatttatccccactgagaaacTGAGAAAAAAGGTTCcacggggctgtgag
acaggggtgtataagaaTACACTgaagaaattggccaaaacattAAGAAT
ATACTAAGAATATTAGCATCATGGAGTTTAGCAGCTGAACCTATGAttgc
cattttaagagcatttttacctGCAAATTACCAATCACCCCTCGTTAAGG
ctcaaaaatttcacaaaaaatgtcatGAGGTATATATTTTATGTTAATTT
TAGATAGAATTTAGATCCTAGCCTAAGAATacctcaaaattatttttagg
gTGATTATCCGCCAAAAGGTTAAGAAGACCAAAATGTCATTACGAAGGTC
ATTATTCTATATACTATGGACCTTGAATTAGAGGTCTGATAGAAAACAAC
GATCTGGGGAGCTCATTTCATCATAGatcattttctatttctatttttca
taTATTTCATTTGATTTAGTTTTATCACTGAAATGCTACAAATGTATACA
TGCAGGAAATTGCCATAACAATATGACCGTGGAGTGTTCCACAAAAGAGA
ACGCGTGTTTTACGCATTACGAAACAAGGGAAGTTTATTCATCACGAGAT
TACCGAGATCATGTTGAATTATACGTACATCAAGACTGTGGTAATGAAAA
CGAACAATTTTGCAGTGACGCCGAGATGTGTGGACGCCGGGCAATCTCAG
TTGGATTTGTCTCATGTAAGGTAAGGTTGTTTCAGTGTCACTATAAAATA
TGGTATATAAAATACACCCTGTATCGTCGCACGCCTATTTCTACAGGGTA
TTTCTACTTTGATTTTAGAAATCACACTGAccacttctcacagacccgtt
gttttcaagtcaggaaattcagtggggatgggaaaaatagcatattattt
tgcagtgaggattggtttaatggattttttcggtggggacaaaaattgga
agataattttccaccgggggcgatattttggcaaatttttccagtgggaa
cgAGTCCCGCTcgaccgggtctgtgagaaaggggtgttttgGAGCtgtaa
agaaaaagaatttgaaatcaCTATAAAAACACAGGTAATTTCTAATCTCA
TACTCTCGGATACCTAATAGCtgtccccccccgctaattaatttttcgaa
aattttccacctaggacattcttattccacccccccccgcttattaaatt
ttgagaaaatgtttttgaaggttcccttttttgtcccaattctgctgtat
tagcctccttttcaaaaatgttccacccaggacattgttattccaacccc
ccccgcttattaagttttgagatttttcccaACCCCCCCCATCCCCcact
tattccaaccccccggcaattaggtacCCATTTATTTTATCCCAATACAC
GAattttcctattagcagattcatgtaaaaaagtcacgaaaaaaccgCCG
AataaagctctgattggctgaaagcACACATtagcatttttcttttcttc
aaaatgttcaaagtaTAAAGATAATGTTTGTATATCTCAGGCAAGCAGAG
CTTCACTCGACTttctttcgcgatttttttaacattaatCTACTAATAGG
GAATTTGTGTATTGGCTGAAGAATTTTAACTCAGGTCAAATAGACAGGGG
TATTACACTGAGTTTCAATTCGATTTTAGGTCTCATGGTGCAAAAATGAT
CTCTGCAATACAATTGATAAAGACTTATTCGCAACCAAGCGACAAATTTA
TTTCGGCTCAAGCTCAACAACAACTAGATCTATACTATGGATTAATTTTT
TGGCAATGCAAGTTTATCGCTTTGTATTTAGTGACGTGATAATGTGATGA
AAATATGATCCATAGATTACTGACCAGATGAATCTGTGGTTTGGAGGGTA
TGAAAGTTACCTCTCGCTTATGAAAGTGAGTCGTCGGTATTCGGATTGGT
TTTCTATTAAATTTGGTAATGATATGTGAACTATgacataaatattttaa
tttataatattcaatatattttctAATATTAAAGAGTATTCTAAGCTGCA
AGCCACTAACCTTGACTGTCAGCCTTAGAGCCTACATTATGCATAAAAAC
TTTTTAgttcaagaaaaaaaagctgggaaacattttccctacacttttga
tttaaataatagcaaccctgtctcacagccccggtggaacttgtTACCAC
CAGTGGGAAAATTCTATTCCTATGTCAAATAGTCCAGTGTGATggttttg
gattgaaattcaaATGGAGGGATGTAAACACAAAGTCAATTCTCCAATGG
CGcggaaattgtagggtattatTTCCGTGGTAGAGGGTACAACATGTTTA
AGCTTGACTAAAATGTCCGTATTACaccaaaaaaattcttaaacatTAAA
TTCAATACATGAATTACCGTTCATCCTACACAAGTTACAACATTTTAAAG
CTACCATTGTTTGTGGCATAAATTTTCTCTCACAACTATAACACGGTAGC
AGAAACGTAGAATGTGCTTGTACCAATCGTGAAAGCATCTGTTCCCGTGT
AGCGTGCAGCTGACACACACGTGCAGCACGATCAATTAAATTTAGTCCAA
CGAAATTTGATGACGACTTCTCATCGAATCGGATCTCATGCTTAATTGAT
TGGCCACATAATAAACAACTTTCAGCAGCGGAGAGAACGCTAGATGGATG
TAACTTCTTCGTGATATCACATTGCCGACAAACGTAAAGTGAAGCGTCGT
GTATTGTAGTCCTCATCGTACACCGAAATGTCTACAAGA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00059494	TCONS_00059494	Clytia hemisphaerica	transcript
TCONS_00059495	TCONS_00059495	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00059495-protein	TCONS_00059495-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_329	supercontig	scaffold_329:22542..31130 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.58	0.45	0.09	0.24	0	0	0.06	0.07	0.11	0.12	0.1	0	0.29	0.28	0.03	0	0.51	0.22	1.24	2.04	0.37	0.28	0.85	0.85	0.51	0.95	0	0	0.26	0.17

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XLOC_037455 (gene) - C. hemisphaerica