XLOC_037466 (gene) - C. hemisphaerica

Overview
NameXLOC_037466
Unique NameXLOC_037466
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_329:431649..439730+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037466 ID=XLOC_037466|Name=XLOC_037466|organism=Clytia hemisphaerica|type=gene|length=8082bp|location=Sequence derived from alignment at scaffold_329:431649..439730+ (Clytia hemisphaerica)
GAAATGGGAATTTGGGATTTGGTTTTAAAAGAATGGTGTACATTAGGTTT
TGTTCACAAAAAACGAGAGCTTTTCGAATAAAGATTTTGCTGTAGAGAAA
GTAACATGGGGAGGATTGACTTCGCGAGTATTTATGAGATAAATCTTTGA
TCAAAATGGAGACGTTTTACTGTGTTTTCTTGTTCATGCTTTACTTGCTG
TCATATTTGCATCGGACGATTTCAGTTCCAGGAAGAACAGGCTTaggtat
gaattttttttatcaaccgAATAAAAGTCCTTATACTTATGACccatatt
ttgattatttctagcAGAAGGCTTTGAAATATTTCcggacagttagtcac
actagcgtcccgccaaaatgcgtatcaaagattaatgctgcgaaagcgct
atatcgtttacctgactctcaagcaaaaaaatgcgccgcaaaacttctaa
agggatttatcaaaaaataacccggcgctttttaatgaaattagcatttt
caaaaactttgagaaattgcctaaaatttgagccatagataaaaaaattt
gagccaagccaaccttgaaaactaatttgaagatcaatttcccaagaaaa
agatctacaggggaggcggaacccacctagatccgcgcactgccggatag
gctatctcccggaaattttgccggacctcaaacaatgacccatttacatg
tgcgtaattgtttttactttagcgtataaacaaggccttaaaaatcgaag
cgctgtctcgggaattgaatggcaaattttggttggctgattttggctgc
tgcacgttttattttgtttcaaacgttcaagttttaattaattgtcttgc
gaacttgattcaggtaactctcatccttgttgtgcaaatgcatcctgtag
atgactgatgttgttttttctgaaagctagattttcTAGTGTGACTAATT
GCCGGGGGTACTAAAAAGTTTGTGACAAAAGTATGTGGACAAATTAGCTT
TTTTGACATCATTTTCTCAGCACCTATTCATCCTATGTTAGAAaattata
caccgttggaaagatatttccaagaaaaatgatattaaggaaaaaatatt
tttgaataatactttttttttaaatcatggcatgaaatttctttaaatat
ttgagcctttttgatttcaaatctgtattcagatttttcatatctttctt
ggaaggaagaaagaaagaaaaaatctgaACCATTTGAAGGCAGAAATGCT
CAAAGTCTTAGCCCAGCTGACACAATACGTTATTTCATCTAAAGTTATAT
GAACGCTGTGGACATTAGATCAACGTTATAACAACGTTATGTATCAACTG
GGAAGGGTGCCTTGCACTTCTTTCCTCTCcacttttattttctttctcaa
atCTTTAGAGAAGAAAATCACAAACTCAAAATTAACCTTCCAACAAGGTA
TAGCTAATAATCAAAAGCAATGTTTACAAATTTAGGGAttaccaattttt
ttggaacGAATTTATTTGGGGTTTATTTAAAATGCCCGTTATTTTTTAGA
TGAGGAATTCCATTGTCATCCGAACGGTATGACATTTGTAATATACAATT
TTACCCTGTATGAAAGAAATAATATTACAATAAAGTTCAAAAATGTTACC
GGAAAATCAGCTGGAGACTGCACTCGAAAATATACGCAAGAAGTGAAAGT
GCCGCCTGCACTAAGAGCTCCATACAATGAATGTGGCATAGAATCCCATC
AGAGAAATGGTGAATTGGTTTACACTCAGACAATAATTGTTTCTTATAAC
GAAACAATCTCGGTTGAAAGACTGGTTTATCGAGAACACATATTTGATAT
ACATCTCGAATGTACTATAAGTAAGCTTCATGAAGTCGAGTTGGATGGCT
ACCTCAACGTGACGAAATCGAAAGAACGAGTATTTACAAAAGGTACGTCt
attaatataattttgtttagaaaatgaatttaaaatttactcttgtctcc
cgaatagatgGGGGTCCGAAGAAGCAGGGGGGGGTCCGACTAATCTTGCT
TCACACCCTtttcaatccaatgtgaaaaaagcttctgaattaaaattgat
gagtaagcaaacgatatcactattatttaaaaacaaaacttttaaagaaa
tTGCAATAACTAACCCCTTTTATCATAAGTAACACGCgtttttcaatgtt
ttattgaatatttcctatctatataggaaatatttgttaaaacggtaatt
tttcttcttctccaagtctaacgctcggttttggtcaatttcgtgagttt
gtacatgagtctctttttaaatcaagctccggcggtaaaaacagtaggaa
gtttttttttcgaggcggaagacgtcatatCTTCGAGGaacgtctgtggt
aaatatccgtacggtgctctattctccttgtcgatcgggcagcgtcggcc
gtttcagaagcgtattgttgatcggaccatacctactgctttgtttctaa
ctgtcaaaacaaagatggttgaaaatagacaacaacttttgctctttcgc
taacttttctttgctttggtttatatgctttgatgagttgaattggatta
TGATTNttttcgctacttttctttggtttggtttatatgctttgatgagt
tgaattggatcatgatttttgtacgattgtcacaaggaatggtcgatagt
aaacttttcttaatattcctttctggatttgatcTTTCGTTTACATCCTG
TTGGTTTGGCTGGAATGAGCTGGAGAGAGATgatacaatgctggacaaaa
ggtttgtagacttctgcaatatttgcaaaatacttcaatatcgatcaaaa
acaagttcccaagaggctctgggtgctttccaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaaccacaagg
gcttgattaactggcttacaccagtatcaaaacgctgattttttgcttgt
ggttccctcaaaagcaattcaaaagcaatgcaaagacttcgaaagtgttt
ttcttaacttccgtcccctttcagacacattgaagagtcattttgctcta
tttctcatcatttttcactgaaatttcatttgtctacaaccttttgtccg
gcattgtacAATCTCTTGCGTCTTGGaatgaaaaacaggacattttatca
agtttcacaacaaactaacttcaattttgtttgtatatttacataaatcg
tacaaaggcaagtgactgtgaataaatctgaccatgttatacctgaaaaa
ttacatacttgcaatcaatatgaaaaaagtttgcacctaACGAATACAAt
gccgacaatgcaacaatgggaatggttgatgaactgattttagctaagaa
tttaaacatggagcaaaatagactggttaatgattgaatttcccttggtt
tttttatctacaacaatgaattaactgctggggttagtgacagttagtga
aactcgttgcggttataaatttcaaattttaaagctgataaccggatccg
gaacaccggaacacaaaatttttcttgaacttggagattttcttccccgc
gtgcattttataacgtggaaaactttagttgtgaattttagagatctttt
gtaacttgtgttttaaacgtagaaacttttgtcgtgaatttggagatttt
cttacagtcaactgctccaacttgggcctatctgacaaaacatgggacgg
caatttggccaccatttcgccgaacctccaaagtcatttgatttgagtta
atgaacaacgtattaaaaaatggcaaaacgatggagcgtttgacgtcact
cgcgcggcaagttacacacgcgttatttgttaatcccgataggcggttag
gcagcgggtgttctctaattctccaatcggcgctatcagtgaaagttatc
gtgacatgttatgaaaggaagtatgattgataaacttggtggagttatca
aaacaagtttgttgtcaaagagatttaacaagttagtgaaaatacagacc
agatatcaaccagtcccatgtttcgaccaatcgtcccaagttaaagcagt
tgacggtatgtacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNtatatatgaaagtataatgcaaaatatttcat
ctcattttgaaaatatataaaattttctttggttttcttactgtgaaata
ttctcctttttgtctatctttcattttaaatatttgccctttttggctat
ataatatttctggaaatcagcgcttaaaatttaataattatataatcagc
TCTTTTGATGTGTTTAACAACActacttggcggtgcgacgccgggtgacc
gctagtataatactaaaatcatttaaagtccacctaacgaaaattaaagt
tccagccaatttgattactgcattgttgttctcagtcgggttcagcttgg
atatatttcgtgatccgtagctttgaaACTACAGTCATCTCATGAATAat
cataaatggaattttgaaattcttagggacttgtgttgcttgatgttatc
tgagatttaaagcactttgaaatcttttgaggacatcaattattatttta
acatttgtaaaggaaATATTTATCCGCATCTTTGCGGCTCTTGTTTATTT
TTAAAGTTGGTGATGTTACAATTGACCTGCAAATGATCCGGTTTACAGAT
GCCACTTTTACCAAGGAAGATATTTCCCCCATACTAAAATTAGACAAGTT
TATGTACTTTCTAATCACGATGTCTCCTGACAATGGGTTCTTTTTGTCTC
TGCAACAATGCTATGCTACTAATGAATGGAATTCTACCGAGAGGCACTAC
ATAATAGAAGACAAGTGAGATTTATTGTAAAGATTTATACTTGGGTCACT
ACAATATAACCCTTTTGATACCCTTGTATCACATGGGAAAATACCTTATA
ATTTCAGCCCAACTtggaaattaaattttatttcatccccatttgaaatt
caatgtttgaGAATTGCACTTCAAGATCATTGATTGCCACTGAATTTTTA
AACCTtagaacaaaggaatttctatcaccattgggatttcaatagaaatt
tttatccacactgagaaaaaaagttccaccggggctgtgagacaggggtg
cccTTTGTCTTGGGAATACaccttttttgttaaaatacacAGGGGGCTGT
GTTTTAACAAAACACCCAGTTCTTTGATGAAGTTGGAGACATATCTCTAT
GTCTCATGACTGGTCTTTCTAAGACTTGGGGGTAATTAACAATttataat
agacgatatcggcttaaccgaattctccccgaatgattacccatgatgca
tcgcgcaaaaaaattcacggacgataacccaaaccctaacaatgcatcat
gggtaatcattcggggagaattcggaaagccgatatcgtctattggaaat
gacattcttagcttgagtagcaaaattccatgatggtgttattcttagca
ttattcttaattttttgcccattttcatcatggacattcttataaagtgt
attcttataaaagtgtGTATTCCTTGGCTTATTCTAGATGTCCAAACATA
GACGATAACACTGTACAGATTATGGAAAGTGAACACCCAACTGCTGTCAT
CAAATGGCAAAGTAAAGCATTCAGATTTTTTGAATCAAATTCACTCTTCA
TCAAATGCGAAGTTTTTATTTGTGATCCAGGAAGCCCTTTTCCACATCCA
GAATGCATGCCTTGTGATCTAAGTCTAGTTGATAAAAAACGTCGTGGTTT
GAGATCACCCAGTACTGATGAATTGAAGAAATCAACTGTAACATCAAAAA
TGTACTATTTAATtggtgagtgttttttttttgtattacaCTTTCCAGGc
gggaaaaagaaaaatatcaaaacagaaACAAAAGTAGAAATTGTTTTCCC
TCCTTCTCTTTTATAATGACTCCAAAGGACACAAAATATCTTTCGAATTT
TTCACAAGGCCTAGAGTTATGGTGATTCAATCACGTAGATGGTAATTTAA
TGTTCGATTAGTGAGTCGAGAACAAGTTGCCTCTGAATGCGTGGTCACAG
ACTATTTGTTATGTACTACtcgttttttctataagaacaaactatataag
aatataaggttTCGCTGGCCAAAacgttaagaacaaattaaaaacatttt
aaggcttaaaactcaaaaacatcctaatttttaggaaaatggtcaaaaac
attcacaaaatggtcaaaacaagaacatgttaagattcaaaaatttttga
tgttcttataaaaaaacgtgtttgtATGTAAATAGAAAGTTTCTTTACAT
TCAGGTGAAGAAGAAGACCATTATGCTCCagaaaaccaaaaacaaccagc
CATCTTTTCTGGTACTAAAGGCACAATCATCTTGGTATTgttgattcttt
ttattttggctgttttgatttgttttatcAAGAAATTCATTGAGTTCGTT
GCAAAGTACAATGAACGGCATGCTAAAGACGTGAATCTAGAAGAAAATAC
TCAGAATGTGAACGAAGAAAAATTATGAATCTTgacttttgattattttg
ttttgtttggaaATCTCTATGAAGAAATAGAAGCAATTCTTATATCAATT
TCATTTATTATATGAATATACTTACTAGtgctaaaaatatatttaattta
tcatcaatgtaaaaaaaggattctaattatatcaaaatctcaaaacttag
aTAATTTTGCAATCAATCTANGAAAATTCTAATTAtatcaaaatctcaaa
acttagaTCATTTTGCAATCGATCTAGGTTCGAACCAATGaaatataagc
ccgaagggctagaagcgcaATATCCTTTGTGGGATTTTAAGCAAATAAAT
CCTAcaaaagttgcgcggcctagaATTTAtcgctaaatttcaaaataaaa
acaatggaatcgctagattcaatccgtcgccAAAAATACAGCACATgttt
tttaaggctttattttttcttgcatgagaaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059520TCONS_00059520Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059520-proteinTCONS_00059520-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:431649..439730 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
321.41	328.82	61.36	30.3	0.63	0.33	0.37	0.24	0.06	0.72	0.14	0.04	0.12	0.17	0.04	0.24	0.05	0.1	0.02	0	0.47	0.22	105.42	90.27	0.1	0.06	4.91	6.94	37.82	41.73