XLOC_037488 (gene) - C. hemisphaerica

Overview
NameXLOC_037488
Unique NameXLOC_037488
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_329:566036..572490-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037488 ID=XLOC_037488|Name=XLOC_037488|organism=Clytia hemisphaerica|type=gene|length=6455bp|location=Sequence derived from alignment at scaffold_329:566036..572490- (Clytia hemisphaerica)
TATACTAATAATTGATCTTCATTTGTTTTGAATACTAAAAAGCTTTTTCC ACTTTCAGAGTAAAGTATTTAAAAACAATATAACAAAAGTAATGAGTACG CAAGCAATGAAGCATAAAATTGAAGAAGAAAATGAAGTCCAAACTGGAAA CGACGAAAACAAGACCCCAAATAACGGAGTAAGTTTTTTTTATCCAGCGA ACCGTAGCCATTAAGATTGGGCATTGGGCTACTGTGCGCAATGTCATGGG TTCAATCCCTGGCTGGGTCAAACCAAATACTTTAGAATGGTTTTTGATAC CTGTATGTCCCAATGTTCAGCAATTAAAGAGAAGGATTAAAGGATAGCTA AGCAATCCAGGGTAAAATATTGGCGCTCTCCCTACCTTCAGTCACCTTCA GTCACCGAAAAAGGAGCCTGTGGGTTGCCGCAGAGTGTGGTCGCACGACT TAAGTTTGAGCCTTCATGATCTCAGGTCAGCGCTTTTATGCAGAAGTCAG CACTTTACTTCAGTCATTTTGACTTTTTATATGTTATCACCGTCCTTTTC GTACAAATCATACAGTTTCCTCAAAAAAGCTTGAATTCCTTTCCTCTATA CTATATTTTAGCAATTTTTTGTTCTAAAACTGTACTATTATTGTCGGAAA AATGTCATGTTTTTTGCTTACTAATTTTAAACAGGTCTATTGGAATCCTG TAACATTATTACTGTATTTCTTATTATTTTTTCAGGAACAGGAACCTTCA GCCAAGAAAGCCAAACTTGAGAATGAAGGTACAAAACAAATCAACACGGC TGAATCATCGGTGGTTGAAAACATCGAAGCTGAATCCAAAGTTGGGATGA AGATGTTGATCAATAAATATCGTTTCCAAGGTAAATGTCATAATATCGTG CATGCCCTCATGAATAGTGTAATTCCTGTTGAAATTAAAAGATTAAATTA ATTAATTAATTAAACCCTCTTGCAACTGCAGGCTATGCCGCGACTGTATT TATTAGCTACATTACCTTTTTTTTTTAGCCAACTATCTTAAAGGGATGAT CAGATGGTTTGAGATATTTTGCCTATAGATAGCTTCTATTTTTGGAAAAA CTTCTAAATTTTTCGGTGTACTTATTTTCCTGACTCAAGTTATACCACTT TGAAATATTGAACCTTTGCTTGAAAACAATAGAAAAGAGTTTGAAAAGTC CCTGAAAAGTCCCATTTTTCGAGATTTCAAATTGGCATAACTTGAGTTAA GAAAATAAGTACACCGAAAAATTTAGACGTTTTCCCTAAAATCCTAGAAG CTATCTGCAGGCAAAATATCTCAGACCATCTGATTATCCCTTTAAAGCCA ACGTTAGATAAAAATGAAAATTCAAGAAAAAAACCATTTCAAAAGCTTCC CTCTTCTCGATTTTAACTAAAATCCTGATTCATATTTTCTCGATCTTTTG TATGTATTTTTCAGGCATAATCAAGCAAAGGTTTTCCGACTTTATGGTTC GTGAAATTGATTTGGATGGAAACAAAACCTTTCTAACAGACACCAATCAT GTGGATGATCAAAAGCCGGCTACAGAATCGAACAAAGGAGAACCAAAAGA GATGAAAGATACAACATGCCCAATAGATGATGTGACATTGGTGAAACGAA TTGATGATTTTGCCAAGAATGAAAGTGAAGAAACATTGGACGACCGGATC ACATTTCTTAATAATGATAAAGAGAACAGAAAGGCTTGCCATATGTACTT CAAAACTAAATATCAAAATCTCGGTAAGTCCTATAATAATTGTTTTTCAA TCCGAGTCGCTAGAATCCTTTGAATCCTTCCAGGCAACAGTAATTCTCAA TCAAAATGCAAAAGTGTCACTCGTTTTTTTCTACCGTGTGGAAATTCTCA AGGGAAGAAGTGTCTAGGATTACATTGACATGGTTTCTACCTGATAGAAA AAAAAGAGTGTATATTTAAAGATGGATTGAGATAAAAATTGAAAGAATTT CACTTCAAGTATTGAAAACATTTTTGAATGTTTCATCTTTATAGAAACGG ATGTCATCAACAAGGAAAATGATACTCGTGAATTTGTTATTTACTACAAG AAAAGTAAAAAGGGTGACCCCCGTGCACGTAAGAACAGAAACACAGAGGG CCAATTCTGCCATTTTGTTTTACACAAACAAAACAAAGATACCATGGATA CGATTAATCTGCTGAGTAAGAAGTTAAGAATCACTTCAAAACTATTCTCG TATGCCGGCACGAAAGATCGGCGCGCAACCACAATACAACGCGTGGCCGT CAAACAGTGCCGTTCGAAACGCTTAAAGGAACTAAACAAAATACTTATCA ATATCGTGTTGGGGAATTTCCAGTACAAATCAGAACCATTAAAACTCGGT GATCTCTCTGGGAATGAGTTCACTTTGATCATACGAGACGTCACAAATGC AACGGAGAATCAAATTATGGATGCGTGTCGCTCACTTCAAGAGAACGGAT TCGTCAATTATTTTGGTTTGCAAAGATTTGGTACTGGAGGTGCCGGCACT CATGAGATAGGTATGTCAGCCAATTTTGTATGTCACCCAATTATGTATAT GTGTATTGATTCTTTTGGGCTTTGGCAAGGTCCGTCTAATAGAAGTTTAT ATGCAAACTCGACAAATTAGACGTGCGAAAGAAAAAGAGTGCATAAACTT ACACATGTACCACTTTCACTAAGAAAAAATAATACTTTAGGTATACAAAA TTTCGCGAGCAGAAATTTTCGAGATTTTCGCGAATTTTGGCCTTTTTCCG CGAAAGTAAATGTCCGTTGAATATTCCTTAAAGAAGTGATTTGCGTTAGT TTATGCTCGCGAAAGTTTGTACGCCTAAAGTATACTCCAAATCTTTTACA GCTGTATCATCTACATAACCTTACGTGTTCTCTTACTTTGAAAACAACTT TCACAGGTAGAGCATTATTGAAGGACGACTTTGAAAAGGCGTGCAACCTC ATCCTAGCGGAGCCGTCAGAAAACGATAACGATAGAAGCAAAGAACGAAA TGCGCTCAAAATTTACTCCAACAACAAAGATCCACAGAAAGCCTTCCAAG CCTTACGAAACAGGAACGGGATTGAAGGGAAATTGTTGTCCTGCCTGAAG AACTCACCTAAGGATTTTCTAGGCGCATTGGGTAGACTACCACGTAACAC ACGATTGCTTTATCTGCATAGTTATCAAAGTTTCATTTGGAATAATGCTG TATCTTACAGGCTTGAGGTGAGTGATTTTACGCAGAAAGTTTCAATGTAA AAGAAATGTGCCATGTGTTGTGTAACTTTCCCAACAAAGTGTCTTCTCAT TTTTAATTGATGTTACAATCGTGACCCATGAAAAAATTCCTTGTTCAAAC CAAAGAATCTATTGTTTTAATCTATTGTTTTGGAAAATTTCTTTATGTAC CCTGTAGGAGTAGCAAAGTTTTTATGTACTTTCGGGTACCTAATAATTGG AATAAGCGAGGTGGGTGGAAAAATTCTGAAAACTTAATAAGGGGGGGGGG GGGGGAAAAATTTTAAAAACTTAAAAGGGGGGGGGGGGAAAAATTTTAAA AACTTAAAAGGGGGGGGGGGGAAAAATTTTAAAAACTTAAAAGGGGGGGG GGGGAAAAATTTTAAAAACTTAAAAGGGGGGGGGGGGAAAAATTTTAAAA ACTTAAAAGGGGGGGGGGGGAAAAATTTTAAAAACTTAAAAGGGGGGGGG GGGAAAAATTTTAAAAACTTAAAAGGGGGGGGGGGGAAAAATTCTGAAAA CTTAATAAGGGGGGGGGGGGGGCGGAATAAAAATGTCATGGGTGGAAAAT TTTTGGGTAATACAGCAGAATTAGGACAAAAGAGGGAATTTAAAAAAACA TTTTCTCAAGAATTAATAAGCGGTGGAGGGACGCTTTTTAGGTACCCTTA TTATGTACCCGAGAGTAAATTTCCAGTTTTGACATCCGCATTTTTTCTTT TTACAGAAGTTTGGATTCAAACCAGTGGTTGGAGATTTGGTATTGACGTC AGAAACAGGTACAGATATGGATTTAGTTCAAATTAGGAAACAGAACTTTT AAAAGAAAAAATGTGAACAATTTTGATAGATAATTGTCAATTGCTACCTG TTCAAAGAATACTTCAACTATCATTTATCTCTAACATAAGAAAAAGGCAA GAAGGACCTGTCAAAAGACAAACCAGAGAGGACCTATCTATTCATTATTT TGGGCCTGGTATTGGGCCATTCCATTTTATATCCATACAGTAGGAGGGGG GTTGGACGAACATTTCCAGGTGGAGGTTATCAGAAAAGAAGTTCCACGGG GTATAAAGGAGTATTTTTTCATTTTTCCAGGGGTTAAAAGGTTATTCTAT AATTTCCAAAGGATAAAAGACTGATTTTAGTTCGTCAACCCTCACTTCTA AGATATAAAAAGATTTTTCCAAAGGTTTCTTTACAATTCTTGCCATTTTC CAGGGGGTATCCTATCCATATATTTCTAAGAATCTTTTATGGCCTTAAAA AGTTCGCCCACCACAATGTTAATTAAATGGAATTGCTGCCGAATTTAATT TTTTTCCTAAAGAACGCTAACAATAAATAAAAAAGATGAGGATCATTTGA AAGCTATGATTCTCCTTCACCGTAGATGAAGAAGGTCATAAGAAGGCGAG ACTCCTGACAGAAGATGATATCGCTTCCAACACATTCACTATTGAAGACA TAGTTCTTCCTATGCCTGGTTATGACGTCATCTATCCCAATAATTCGTGT TATGATTACATGAAATCGTTGATGGAGAAAGATGGTTTAGACATCACAAA CATGAGACGAGCACAAAAGGATAATTCCTTGTCTGGAGCATATAGGTATG TTCTAGTTGATGCTTTGGTTAAGTCGTCCAGGGTCACGTTTTATTGCTGG GAATATACCGGCCCATTAGCGCCAGGTGGTTGTTAAAAAAATCATTTTCG CAATGTATTTATATGTCACTTACAACCAATCAGCTATTGGGTCCGTGATG TAATGTCAGAAAACATTGCAATGGAGCACGTCATGAACAGACAAATTAAC AGTGTTTTAAAGAACTTTTTACAATTTTTACTCTATTTAGGACGTTTTTA GTGAAACCGAAAAATATGATGCTTTGGTTAAGTCGTTCACGGTCACGTTT TACCCCTGGGAATATACCGGCCCATTAGCGCCAGGTGGTTGTTAAATTCG GAATAGTTTCCAAAAAGGGGGAGCGTTCTAATTGTTTAAAATCGAAAACT CATGGTCTTCGCAATGTATTCATGATATGCGCCATTGCAATCTCTTCCAT GGACCAAACAGCTGATTGGTTGAAAGTGACGTATTGACTGAATTTACGTC ACTTACAACCAATCAGACATTGCAATATGGTGCATGAATAGACTAGGATG GTGAATTACTCCCTGACTGAAATAGCTTGACTTCCCACGAAATAATTTTG TTGACGGCAAATTAGCAGTGTTTTAATTAGAACTTTTTACAATTTTTACT CTATTTAGGACGTTTTTAGTGAAACCGAAAAATATGACTTGGGAATTAAT GCGCTATGATGATTTTACTATATCGCTAATTGAAAATGATGTCGACAAAA TGAAGAAGTCGGAAGAAGAAGAAAAGACCAAAACGAAAAATGAAAATGAA TGCAAGAAAGAATCTGGAGAGGAAATTGGTGAAAATATGAAAGCAAAATC ATCAGGGGACAGTGAAACTATTAAGATTGGAAGTGGTGTTGATTTTGCTG TTGGTGCAGACGATGGAAATAAAATTATTATCTCAGATGACGAAAATGAG GCTAAAAATTCAACGGAGACGAAAATCACTGAAATTGAAAGTTCCGTAAA TTCCGTAAATTCTGAGCCTGACAAAAGTGGAAAATCGGAGTCTGCAATGG AAACAGATTCAAAAACTGAGGCTGATATCAATGATAAAGACTCTAAAACT CTTGGAGTTTCTGATGGCAAGTATTTAGCATTGAAATTGATTTTTCAACT GCCATCGTCTTGTTATGCGACCACTGCTCTTAGAGAATTACTAACCAGTG ATTCGTCTTTCAAAGCACAACAACAGTTGAATGCCAACTTTAATAAGAAG AAAATGTGAAAAAAAGGTACTAGACAGTTTTATATATTTTGATACCTGGA TCTAAAGCTTTTTGCTTTTTTTTCAGTTTTGTAGTTTTTAAAATCAACTT TAGATTTTGAATCTTTTAAAGATATTTTTATGGAGTTTATTTTCAACCCG ATTACGTTTTTAAGGAAGTTTAGGGAAGGCATGGTTCAGTGGTAGCACGA TCGCCTCCTGACCGGAAGGTTTTGGATTCGAGCCCCATGCAAATCGACCA AATAGCGAGGTCTTTCTCAAATTGCTGATCGCCCCGGGTCGCGGGAAGAA CCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059599TCONS_00059599Clytia hemisphaericatranscript
TCONS_00059598TCONS_00059598Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059598-proteinTCONS_00059598-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:566036..572490 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PUS7PREDICTED: pseudouridylate synthase 7 homolog isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.76 15.89 6.89 7.05 19.86 13.9 21.08 23.6 18.31 16.66 13.21 11.12 14.43 16.4 20 22.65 25.71 22.7 6.91 6.65 13.58 12.2 24.53 24.72 16.35 20.52 8.08 6.72 16.59 19.49