XLOC_037580 (gene) - C. hemisphaerica

Overview
NameXLOC_037580
Unique NameXLOC_037580
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_330:542756..546737-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037580 ID=XLOC_037580|Name=XLOC_037580|organism=Clytia hemisphaerica|type=gene|length=3982bp|location=Sequence derived from alignment at scaffold_330:542756..546737- (Clytia hemisphaerica)
CTTGAATTCTAAGGGCAAAACATTAATTTTTGCACTAAGTGAAAAATGTG
TCACAGAAATAATCATTTTTTAGCTTTTTTTGTAAAATCAGTCCAAAAAG
TAACCAAAAAATAGGTGGCNATCATCGTTCAACTACCTCTTGATACTGAC
GAAGAAATAGATACCACCAAAGTTATCAATTCTGTTCTTCCCACTAAAGA
TGTCGATTGGTAAGCACGTGTGATTGACCTAGTGTAATTCATCATATGCA
CCACTGCAATGACTTCATGAAATGTGTAGATATAATGTTTTTGATTTTCG
CTTGCAGCTAATCATTCAATTTCAGAATAGGTGTAGGGGTGCATATTCTA
AATTCCTTTCTCTTAAAACAGGGGTCTCATTTGAAAATTATAAGGGCTTG
AAATAAGGGTCGATCACCAGACATGCCCGACCCAAAAATCAACTTTTCAA
GCTAATGCACGCAACTCTGAACAAACATTTTGTACCGACCACTTGAAATC
ATTATGCGCCATGTTTAGCAATTTTACACCGTTTAGTGGGGCTTAATATA
TAGTATTCAAAAGAGAATTGTCTTTTGAATTTCAAATTTTTAAATCACAC
TCTTTTAGTCTGAACGAGGTCAACACTGGGAAATTAGCACATGGTGATTT
GAAAGGCTTTCTACCTTGCACACCACACGGCTGCATGACCATGATCGAAG
AAAGCGGAATAGAATTACAAGGAAAACGAGCTGTGGTTGTTGGAAGATCG
AAAATTGTGGTATGTTATAGAGGTCGACTTTTAAGGTCATGCTGCAAAAC
CACCTTTCCTTAGAAAGTTTTCTGTATCTATTCCAAGATTTGAAAAACAA
GTTTCACTTTTAAACAAGCTTAAACCTCGCGGTTTCAGAAAACTGGATCA
ATATCATTTATTTCAAATTCGAATAACTTAACTTAAAAAAATATAAAAAC
ACATTCATCACCGAGTCTTTAAATAATGCAAAAGATACACAAAAGAAATA
ATTCGAATCTCATGTTTATATTCCAGGGTATGCCAATGTCAATGCTGTTA
ACTTGGGCAAACGCCACCGTCACCATTTGTCATTCAAGGACGCAAAATCT
AGAAGATATTGTAAGTAGTTATGTGTTTTAATGATTGGCTGTTTTGATGA
AATTTCCTCAGAAATGAACCGGAGAACGTTATCACAGATCCAGGCTAAAA
GCTGACATTAGGTTCCCATTTTCAGCACTCAGTTTGAAGTTTAATTTGCA
TTTGATCGACGCTTTATTCCCTCTTTGATTTTTCAAAAATATCATACTTT
GTTTTTGCTCATTCTCTGAACAACCTGAATTTGTTCAAAAGGTACGAGAA
GCTGATGTCTTAGTAGCAGCCTGTGGCCGTCCAAAGATGATCAAAGGCTC
GTGGATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCCTCTTCCAAGAGTCTGGGTGGTGGTATGTAAAAATTCGT
AAAAATCCTTTTACTACTCATATATGTCTGAGATTTTACTACCGACCCCC
CCCCCTGGTCTGAGTTCGAATAAGCGAGATCTTAAGATATTTTAAATTAA
ATTGAGATTCGTNCACCGAGTCTTTAAATAATGCAAAAGATACACAAAAG
AAATAATTCGAATCTCATGTTTATATTCCAGGGTATGCCAATGTCAATGC
TGTTAACTTGGGCAAACGCCACCGTCACCATTTGTCATTCAAGGACGCAA
AATCTAGAAGATATTGTAAGTAGTTATGTGTTTTAATGATTGGCTGTTTT
GATGAAATTTCCTCAGAAATGAACCGGAGAACGTTATCACAGATCCAGGC
TAAAAGCTGACATTAGGTTCCCATTTTCAGCACTCAGTTTGAAGTTTAAT
TTGCATTTGATCGACGCTTTATTCCCTCTTTGATTTTTCAAAAATATCAT
ACTTTGTTTTTGCTCATTCTCTGAACAACCTGAATTTGTTCAAAAGGTAC
GAGAAGCTGATGTCTTAGTAGCAGCCTGTGGCCGTCCAAAGATGATCAAA
GGCTCGTGGATCAAACAAGGAGCGGTTGTTATTGACTGTGGTATTAACTC
TATTGAAGGTTCGTGTAAAACAGTTTTATTCTGGATTAACAAGTGAGCAA
GTTCTATTGACATTCCGACCATAGATTGATAATACCCGAAGGATTAGATG
GAGTGCTTTAAAGCTCTTCCAAGCAAAACAAAAGTGAATATCGCAAAAAA
TGTTGCTGCTATTGTTTTCGAAAACCTGCGAAGCTTCTGATTGGTAAAGT
GCTGAAATTCTATTGTAATGTCACGTGACTTAGGTAGGATTTCCTACCTA
ACCTCGGCACACTTTTGAGCAAAAGCAAGATATCTAGCCCTTCGAGCTAC
GATTCCGACACTGTGTTGTAGATTAACGCTTTTTGTCTTTAAAAAGAGTC
TGTTAATTAAGACTTTGCTTTAGTTCTTCTAAAATGTGAGTCCTTTTTTC
ATATGGTTACAGGAGAGAATTAGTATAATATCCCAATAAAAATAAGCTTG
TGTTTAAGTTCTTACGTGCTTTTGGGGTATTCATCCAAGTCCTTTTTTTC
CAGATGCATCAAGAAAGAGTGGCAGAAGGTTGGTAGGGGATGTTGACTAT
GATGAAGCCAAGAGGAGAGCATCTTACATCACACCTGTACCCGGAGGTTC
GATTTTTCATTCATATTACCACAAATTTATTTATTTTCCTACAAAGTGAA
TCGCTATTTCATTAATTAGCTGTTTCATTGCTTTTCTTCAAATGCCCCTC
TTAAGGTTAACATGCAAAAATTAAACTCTCAATATTTTCGTCCCCGTCGT
TGATGATATATTTTCATTGTCTCTTTTCAATTAAAATCAAAGGGAGTTTG
TTTTTGACACTGTTTTTAGTCTTTTATACCCCGCCTTGAAGTACAAAGGT
CAAGAATTTTACACCTGAATCACCATAATACTTCATTAAAGTGATTAAAT
GCAATTCTCAAAACATTCTGAGTTGTTTTGATGAATCATGAGATAGCCTT
AGAACATACTAAAAGTTTTTGACCATTTTGAATTTTATTCTAGGTGTTGG
TCCAATGACAGTGTGCATGCTGATGAAGAATACGTTGGAAAGTGCTAAAC
GACATTTGAATCTGCAGGATGAGAAACGTGAAGAAGCTGCTAAATAAAAC
AACCATCCTGAATTCCTTGGGTTTGAATATTTTTTGACGTGGCAAACGAG
AAATCATTTTGATTGCCAGAAATTTATCACTATAATATTGTATTAGATTT
TAGATGTAAATAGTTTGGTTATAATGTTTTATGTTATTTTCATTCCTTTT
TTATATAATATTTAGCTTAATATTAGCTTTTTGAAACAAATTTTCATTAT
AGATTCACTAACTAGCTTCAAATTTGATGTTCTCTAAAGAATATGTAGAA
AATATTTTGTTACAAGCGCAATTGTACAAAGCTCGTTATATATTTGGGTT
TTTGAGCTAAAAACTTAGGCAAAGTTAGATATATCCCCTAGCATCATTAA
ATTTTTATTTTTTCAAGTAGATTCATAGATAGATTTTTCCAAAGTTTTCA
CTAACATGACAGTAATTTTTAATCTAGTGTGATAATTCCAAATATTTTGA
TTTATTATAATTTAATCAACTAAAATATTACAATATGTAAAGTAAATTAT
ATTCAACAAAACCACTAAATTTAGTATGACAACTTTTGTGTCTTATGATT
TTTATTTTATAACTTTTTATTATTTTATGTTGAATTTAGAAAAATAGAAC
CAAGACTGCTTCTCCTTCATCATTTCAGCTCCTTTTTAACACCCCTGTGT
CAGTGACCTGGTGAGATGCTTTAGGAATGGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059751TCONS_00059751Clytia hemisphaericatranscript
TCONS_00059750TCONS_00059750Clytia hemisphaericatranscript
TCONS_00059749TCONS_00059749Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059751-proteinTCONS_00059751-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:542756..546737 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.05	6.97	2.2	2.69	174.7	136.57	81.08	85.65	67.79	71.93	43.07	33.6	15.87	9.58	11.38	11.51	47.44	32.11	5.75	8.37	19.74	19.92	32.82	29.59	27.47	26.37	84.95	41.12	193.23	117.33