XLOC_037635 (gene) - C. hemisphaerica

Overview
NameXLOC_037635
Unique NameXLOC_037635
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_331:814468..818024+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037635 ID=XLOC_037635|Name=XLOC_037635|organism=Clytia hemisphaerica|type=gene|length=3557bp|location=Sequence derived from alignment at scaffold_331:814468..818024+ (Clytia hemisphaerica)
gtcaaaaataactttaaaacgacACCATAAAAACTTATAAGGCAATCTCA
GATTACACTGTTTTGTAATATCAATTTTCttgcatcaaattttaaaaatt
gtatttctgTATTCTTACTTAAACCGTTGATCAAGTGGGGTAGAGAAGAC
TGACGAGATCATAATGGCAAATATTTCTGTGATTCTAGTTTTGCTTGCAC
TCTCTATTGCAACAATTCACGGGTTACCGAAACATAATGAGCCAAGACAG
ACATTAGCAAACTATGCTTTAAGAGGTAAAAATGTTTCATCAACACATAC
ATTTCTTGGGTTGTAGTAGGACTGAGAGTAATTTAGGATTTTGGCCAAAA
CCTGCTGTTAGACTAGAGATTTAGAACTTTATTATCTCGGTTGCATAAAA
AGTAAGTTTGACTACGTAGATTAAAGGCCTTCTACATTCACATTATATCA
CCATATCAGCTCTAATGTAATAAAGAAATCCAATTAAATTAGCCTTTGAT
AATAATTGAATATTTGATTCAGATTTTCAAGTCCACCTCTCGGCAAGAGA
CAATGGATGTGATTGCCATGGAGATTCATGTTATTGTTGTGTCCATGCAG
AAGTGGAGAAAATTCACCTCAACCACACAGGTAATAAGCTAACGTACTTT
ACctacagatttataaagcccgaagtgATGTCGTGCCTTATAAAGCTCTT
CTAAGCAAGAAAAAAGTGAGAATCTCAagaaatattgctgctattgtttt
tgaaaacccacgaagcttcttattgttcaagcgctgaaattttattgtaa
tgtcacgtgacctaggtaggatttcctacctaacctcggtaCACTTTGCA
GCCAAAGCACgactctctcttattcgaactcgaacggggatCGAATCTAA
ATCTGTTCGAATTGTAGAAAGATTCAAACTGTAGAAAGGGTTTTACTTAG
GTTTTTCCTTGAAGGGGAATGATAGTTAATTTGAAcgatagaaatattcg
aatgatagaagttcgaattagcgaaatTCGACTTAATATTAGGATCCAAC
ATGCCTTTTtctgatgttggatgaaatgttggaccagtttgcgtcaattc
aaatttttggaaaaaatgaaaattcaaaaaagaagaaaacaatcgTGTTG
GACGGTGATCCaacattttcacatttttatgtcggatgaaatgttggatc
ggtttgccccgGCCTTGATTTTCGCTTAATCCAACCACGAAcgagatttt
cttgaaaagaaagcaattttttttcatcttcgttatctcttttccttttt
cagTATGTGTTGTTTTGGATTACATACCCGACGAATTGGTAAGTGAAACT
ACTAACCCTTCGAATAATCCCATGATCAACTATAACAAGGTTCCGTGGTA
ATCAAGTTCGAAATATATTAAGAATTTTTATACTTAAATACTCTAGAATT
TTTCAGAATAAGATCGGGTGAGAATCGTGATTTTAGCACTCCCCCTTTAt
tatttcattggatatttcgattttgggaGGGTGGGAGATtcagtggcttc
taggctatattcccaGCCTATCCAGagcaattttgagcttttgaaaCCTG
AAACTTGGCAAAAGTCTATCGTTAAAATCTTACATTCCAGAAGTAATTTA
GAGCGATTGAAAATCATTTGCATTGTTTAAAAATTGGAAGGAATTCCCAC
ATTTTGATTAAAATATTACGATTTTAATTATAGACGAAACTTTTCAAATC
TGCGGATATCTCCTAAAAAAAGGGCAAAATTCGCCTGGAAAAAAATTGCC
CtttaaagttaaattttttttatctactttAATGCTTTTAATCCGTAAAG
TGAGGTTGGAGGaagtaaaataaatttttacccCTTGTAAATTTCAGAAT
AacttttaaccccctggaaatttcaaaagttttcttcgaTCACTTGGAAT
AATAAGTGGGAATATCATTAttatcaaaaaacaacaaatgttTATTAATA
GACAAGTTTTCGTATATTTTCAGGGATTGGATGTGAAGCTCAACATAGAT
GACGTCACTCTTTTCGTTGAAAAAGTCTCTCgtaagtaaaatcaaaaaat
aaaatttgttttcttctttccacTCTTAAGCTAAGGCTATACTGAGCAAT
TTTTTCAGGCGCTTCCAACACAATCTTTGCAACAAGCGcccgaaaaaaaa
agattgtagCCTAGTCAAATTCTCTGCAATCTTTTCTGCAACGCaataaa
acgcaaaaaaatatcgcaaaaaaaaattgcaggAGGCTGCAACAAAATAG
ATCAGATCAAAAAAAGAGGAGAAATTCTCTTTATGtttacttttcttctt
ttgtccTATTGTTTAAAACACTCGTaatacaaattatttttttggctgga
tGAAATAAGCTGTGAGaaggaaatttaaaattttaaaattaattgcAAAA
CTTATTTTTGGTGGCTAGAATTAAACTCTTTTCGAGTGCAGCGCAATTGG
CAACAATTATTGCATTGCACGCGCCTGAAAAAATTGCTCAGTATAGCCTT
AGCTTTCCAGGCAATAATTCTCCAAGGTAGATTTGACTCtcaataattta
tttttcagtgCGAAACCCACCACCACTCTGTGCCGGTATCCCACACTTGG
AGAAATACGCAAGCGTGTGTATTGACTTCTTTAACATTGAATGGACAGAG
AAAGTCGGAGGATGTATCAAACTCGATGCTAAATTGGCTGGAATCACTTT
AGAAGAGATCAATATTGGTTGTTTCTTTTATCCATTAACAAAACATCAAA
TGCGCAATGTATTGTGGGAACAACACGTGATGGAAGAACTACgaaaaagt
ttcaaacaaaTTCAAGCAAAGAAACAGCAAGAAATTTACAGAAATTTCGC
ACTGGAAGAAGATGTATAAAGTTTAAAACGAATAACGTGGGAAAACCGAG
GAAgctaaaaaagtatttttttatttttctctaacTTTTTTGCACTTAAA
ATTTGACGAAAGTGAATATTTTGAGTTCATTAGATTATCAATCTTGTTAA
CCATAATAGATTTATACAAGTAATATCATGtagcaaatttcaaaaaatcc
acATAAAATGTTCTgtaattatttgaaaattccaTGTTTCATTTCTCCAA
ATTCGAAATCCGTTTGTCTTTCTGAGTTGATCTAAAATGAACACTTTTTC
AATAGCTTCAAAAAGCCTAACATCGAAATCGTTCTCTGCGATTCAAAATA
ATGATCTTTCTTCGACCTCTCCTCATTAAATGTTCTTTTTACACCAAAAG
TATCCCATTTGTATCCCTTAAAAGGCGATTTTTTTCATCAACAAATACAT
TAGCTGATCAACTTCCATACCGTGTAGATTATTCGCGTCACCTTGTAGCC
TCATCAACAGTCCACCGTAAGAAACGTAGGCTGATCTGAAAAGAATATAT
TTAATAATAATGAAATTAAACGTGGCCAAGAGTTTGTTCGTCCAAGATTC
TCAACAATCATGCAATTatacttcatttttcttcaaaaatacaacggaat
atttctt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059833TCONS_00059833Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059833-proteinTCONS_00059833-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:814468..818024 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.67	38.07	40.7	40.11	21.51	16.1	28.89	33.85	35.65	23.38	27.42	34.07	50.2	47.98	76.62	85.62	53.47	48.34	33.45	24.74	56.68	58.16	49.92	55.26	28.83	27.49	35.27	43.01	163.22	129.54