XLOC_037895 (gene) - C. hemisphaerica

Overview
NameXLOC_037895
Unique NameXLOC_037895
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_339:189800..194674+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037895 ID=XLOC_037895|Name=XLOC_037895|organism=Clytia hemisphaerica|type=gene|length=4875bp|location=Sequence derived from alignment at scaffold_339:189800..194674+ (Clytia hemisphaerica)
ctAGATTCTCTTAAAGGTATCTATTAGCATCTATTTGAGAGTGGacacag aaaaaatttaaaatgacaGATGATGGCATTGTGGCACATTTTAAAGAACT TCAGCAAGGTGGGTAGCATTATCTTGATTTATcaactaacttttttttgc aACTCTAGTCATCTCTATCATGCGTTTTTTGCTAATAAtatgaaattcaa aatatagAACTTCTCCTCATTCCACCATACTCTGGTTTTGAGCTAtgttt ttttaaacataatCCAATCAGAATCAAGTTAAGTTCAGTTCTTCTTTATC GACAAAGATTTGTAATAACATTTTTATAGGGGGGGGGACATTCAAGTCCT GGAGCCATACAGTAATATGTTGTGATATTATTCATTTTAGTCTTTTTTCT TAGAGAAAAAGAAGCTTCAAAACCGTCTTGACCACTTTCGATTCAGAAGG AAAGATTTAGAATCAAAACAAGGCTCAGGTATCATTTCGAAGAGTATAGT TGTATTATATATTCTGGtactattattatttttttaaatttccataAGCG AAACCAACTCTGGATTGCTCAGAAATTTAGTATTTAATAGATTCTGTTTT GTTTACTCCGATTTGTGTTCACTTGCCTGAtaaaatgggctgttccatta aatttccatataggggggtggacaaacctttttaaggcaaaaaaggttCT TAGAAATTACCTACCTCTTagaaaccccctggaaaatggcaaaagttGTA AAAGAAgccttgaaaaattcttttcatacatTTAacgtgagggtggacga actaaaatcagtcttttacccctggaaattttagaataaacttctacctc ctggaaaaatgaaaaatactcGTTTAgacccccctggaaatgtttgtcca ccccctgtatggatataaaatggaatagcccaatgacTAGCCCTTTTTGC AATAACTTTGAAAGTTTTATTGTgtactttttcttattttagtcACAGAC AAAAACAGATTACTCCAACAGAAGCATGATAATATGTCAAGTTAGTGTTT TTTCAGACAAAACTTTTAGCTTTTAAGTACataatgtttcatttttttca tgtttcaaattttaatgtatATGTGTTTACCAGTTGATGCCGTGCAATTT TGAGTTTGTTAAAGAAGCACACTTTTACTTAGTGTATATACAACACTTTG TCTTTAGTCTAGTTTCAGTTTCAATACAGTCATTTCTTTGCTTTTGTATT ATACAGGAACAATTGAAATAGCTAAAAGAAAATTGCAAGAGTCCCAATTA CAAGTTGAGAAGTAGGTTTTTTGCAGTTTCTTTAGTCGTTTTTCAGAAAG ACTAAATCGCATATTCAGTATCAAGACTTGATTGTTTATTGTCTTGCTCA GGGTATCAGAAAATAAATTATCAGTCGATTTGAGGACATGAAGTATCTGT TAAAAATGCCCTTGCCTTTGTTAATGACCTTGAAAATTCAAGATTACTTT TCCAATGGGCTATTctagaaatagtctgtaccccctatgttagGTGTGAC ATTCaaggtggtctggaaaataaaaaatccaggtctggatttttgaatga taaaatccagttggtcagtaaaatcgggttaaaaatccagggtgaccagt ataacgaggtcgaaaatccagcGTGGTCCAAAGAATTGGGATAAAAAAAT CCATGGGGGTCCTgaataaaatccaaaaaaaagatCTCAACAtaaggggt acaaattttttctggaatagcccattgatATATGTAtgttttcttctttg tttttagattACAGAATGAGAATGACGAACATCAGGCATACATCAAACTC GTTAAAACTTCTCTCCAAAAAGAAGAGGATACAAAAGACACCTACCTGta cattttttttaacaaagttgTGAATGAGCTTTTtattgggaaaatgtttt tcaaaacaaaagcaagGGATTTAATTTATTACATACTTTGTCAAATATTG ATAAAAAGCCATTACCACCCCTTTTCCATTGCATTGTTGATGTGATAGAC ACCCTTACTCAGTTTTCCAATTTAATATTGTCTTTTTATGATGaatagtt tttttgttttcaggatAAAATTACAGAATCAGTTTGATGAACTATCAAAT GATTTTAGAGGTGCAAAAAAGTTTTACGTGAGTGtaataaatcatttttg agaaGCGATTTTCTTTGTTAGGAGGATGTTTTTGTTACTGATTATACCTT CAGGATTAATAATTTCTTGCTTTTAATTTTGCTGATCGATTTTGCTTTGT TGTCAGAACATGATTCAACGATTTCATGTGAAGTCGAGCATTTGATTGAG CAGTATTACTTCTTTTCTCATAAATTATTCACTTTTCCTCGTATAGGAGG ATGAGGAGCTGGAAAAAGAGGTCGAACATTGGAAAAACACCTGCCAAAGG AGAAAGATCAGTAGTAAGAACCATTTTTCTAAATCAACCCCTAAAAATGA GGGTTGCCACTTTTTGATAATGAAGACAGGGAAAGTTCTcttattaaaat aataactcaCATTTAGAACCTTCAAATTCTTTGGGAAAGTATCATTTATT CCTACTGATAATTATCTTTTATCGTAGAATTTATATATATGATGGCTGAC AAAATGTGTTTGGAGTAATGCCGTTTTTCCCTATTTTGCAATTAATTTTG TGACGTGTAAATAATTTTCAACAGGGGGATTCGACCATTcgtaatttgaa taaaaaagacaGAAAACAGTTGCTTCTGAATGAAACAATTCCCCCTAATA AAGGTGCCGCAAGctaaaatcgctagcgaaaaaaaAAACGCTGCAAATAT GACTTCAGACACGTACGGCTATTATTATATAGATAAAAATAgatataaaa aaatccaaaatcatTGGCGCTTTTCGagatttcttcatttctttctttaa cCAAATACTGCTCTAACGGTACTTATTCTAATACTTATTTCTACCCTAGA TAAGAACTTTAATCGTCTAGCTCCTGTTGATGCGTTTAAGTAAGAAAACC AATTATTGTGGATTTATTTTTAGTTGAAACTGGTGCCGAATTGGTGAATC AGATTTCTTCTCAattgaaagaaatgaatttaTCAAAGAGTAAGAAATCA CTGCTTTTTATACATTAATCTCCCataattttcaataaagactTTTTAGT CGAATTTTGATTTCTGTTTATTcgtttgtttcgaattttaaaggttttgg ttGCACAAGTTTATAGTTCTTCTCCTCATAAATCAGTTATGTAATGaagt aaatttatttttagctGACTCAGACGAAAAACCTGCGAAGAGTTCTTGGA AAGAAGTGAATACCCATCAAGACTTTCTTACGTAGGTGGTCTGTCCTTAT ATCTGAATAACGCGATTAAGAAATTTTATCAACAAATGCTCTAAAATTTC TTCGAAAATGGTTTGAAGCCTTAcatgatgtttttgaaaatgtgttcTAT TTTTGCCAGAAAGGGATTTATTAGGCCAAAATAAAAATAGTGTTGAAGGT CAGAGTCCTCACGTTGAAATAGTTTTTATTGTGGGAACTCCATGGGGGGT ATCGACTTTCTTCGTTTAATACGAGAGTTGAATCCTGATTAAGATGCAAT AGAGTTTGACGGTTGGTTTTAATAGTTTTTATTTAAGATCGTTCTAGGGG ATTTCGATTATCCCTTGTTTAGTTCTGATTGAAGCTTTTGGGTTCATTTT CTGAGTTCTTTCTTTTGTCTTcttgattttttccttattaCAATAGGAGC TTATTTCAAGAAGATTTCTCAAAGCTAGAAAGCCTGATAACACAAGAACA AAACAAATCCCAACATTTAGGGGAACGGTTTGTTATTTATCTTATGTTAA AATCTTTGTTTCATCATCCAAAACTTGACTTTATATCCATTATGTTTTCC TTTTTGATCAAAAAAGatccaaaaaattataaaaagtaaagtgtgaaaac aaaagaatgaaaaacttataagaaaaaataatgtcaaaaaaatacaaaag gcAGTATTTACATAATTCATGAGGcatcttttccttttttttattatttg caatattttcacttttaatGTAAGGAGAGGAAAATCAATATACCATATTT CCCTCGGCTACTTTGTCCCTTTCTTTTCTCCCCTCAGTATAACAGTCGTA ATGGAGCAACTGAAGACCAAACAAGACGAACTGaaaaaaatacacaacac aaatGTCTGAAGCAGGAATAAACTCTCTTTTCTTCTGAGTTGTCTCACTA TCATTGGTCGGTGGTAAGTCAGGGTGGCTTCTCTGTGAGACAAATTTCAT CTGGTATAGTATACATAATACCATGTTTAATTATTGTATATAGATTTTTT TGGCTCCACGAACTATGTTATCCTTGTGTATGTTTGTATAGTTTGTGTTA TATTACAATTCTTTAATCCATCGAATCTCTGATATCGCTTCAtttcatct tttgttttaaaattctgGGAAAATTCATCTATAAGGCTCAAAATTGTAGT TTATGATTTAACAGAACATATATCTTTTGCAGCTAGtcagtcaatcaatc aattCTAGAGACGAAACGTAACCAGCTGTCGCTTGCACTGAATACAATTT GGTTGAATGCATAAAGGTTTCCTCTACTGATCCATATGACATTATTTCAG CTTCCATCGAACTGTTAGTATCATTTTTAAGGTCTGTGTTCATTGTTTGG CCTCATGGGGCGGCCTATTTCCTTATGGATATACATTAACACTGTTGATG AGGCTTTCGATTTCTTCCGCTTCGCTCTCTTCAAGTTGTCGCACGACATC CACAACTGACAAAGGGTGTGGtact
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060240TCONS_00060240Clytia hemisphaericatranscript
TCONS_00060241TCONS_00060241Clytia hemisphaericatranscript
TCONS_00060242TCONS_00060242Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060240-proteinTCONS_00060240-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:189800..194674 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6 6.16 4.38 3.33 2.69 2.3 3.54 3.32 2.22 2 1.63 1.89 1.29 1.24 1.88 2.91 3.45 4.14 0.41 0.3 3.05 2.68 6 5.1 76.56 65.45 0.74 0.82 1.9 2.06