XLOC_038200 (gene) - C. hemisphaerica

Overview
NameXLOC_038200
Unique NameXLOC_038200
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_349:97802..101920-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038200 ID=XLOC_038200|Name=XLOC_038200|organism=Clytia hemisphaerica|type=gene|length=4119bp|location=Sequence derived from alignment at scaffold_349:97802..101920- (Clytia hemisphaerica)
TTTAGAGTATATAAATAAATAAAGAATTCCACCTTAATAAGGAATTGAGA
AAAAATAAAATGTATGTTGTTTATATTTGATTACTTATGATAGTTTTATA
AAAGATGGGAATTGGTACAAAAACATGTAAAAGCTGCAATAAAACGGTAA
GTAAGATTTTGAAATATCATATACAAACAACAAACACAAATTATTTTGGT
TACAAGGATGTTTATAAGCAGTTTTTCCTACCAAAGTCTTCTTCTAGAAA
TTCAGTTTCAATGCCATTGTTAGGTTTATCTTTCTCTGATGACCTTTTTT
ACTTTATTTCTTTAAAAATTTCATTACAATATCTTTAATTAGCAGGAGAC
CAAAGTGAGATTGAACCTCTTATCAATTAAAGTAGCCAAACAGAGGTCAA
TTTTACAATGAAAAATCAGTGTCTATTGATGCAATCTTTTGGTCTGTTTG
ATTTAATTAAATTCCTAATGACTTCAAATCATTATTGCTATGAAAGATTC
CAATTTTTAAAGCTTTGTTAGTGTTAATAAGGTAGAGGTTTTTATATATT
TACTTTTTAAGCCATTTTGAAAATGTTTTGTTTATTTTAAGGTTGCTTCA
GCCAAAAAGGTTTGTGATTGTGGACATGTCTTTTTGGAAAAGAAGAAAAG
AGGTTTCCAAGAAAGTAAATGAAATATAAGATATGATAAAGTGCTACCAA
AATTTTAATATTGTCCCAATTGTGAATATTTTTCATTTTTGATTGTGGAC
ATAAAAAAAAAAAGTTTGTTGGTTAAGAAATAATTCTATAAATTGTTTTT
AACTTGAGTGAAAAATCTTTTGTTTGTCTGGTAATTTAAAATGAAATACA
ACTCATTGCTTTTATGGTATGACTATGAGCAAGTTCGGGAAACATAAATT
TTAGTAAAAGCAAATTATTATGGTTACACATTTTAAACCTAATATAATTT
ATTAATTTTTCATCAAGGTCCAATTGTGATAACATCAGATCGTTTACGTT
CATCTCGTGAACCAGATGAAGATGATGGACGACCAATACGTGCAAAGAAA
CATAAATATCAAGACAGCGATTTTATTTATTCTGCTGGTACGTCAACATC
TACTAAACCGCAACAAGCTGAATCTGGTGAATCAACTCTTAATAAAACTA
CATATTACCAAGGGGAAAAACTTTATCCTAAACGTGATAGAACAAAGACA
TCTAAATTTGAAAAGCTTTTTAGTAATAATTTGAAACAATCTGATGCGCA
ATTGCAACTGAGTGGCGATAACAATTCAATACAAGAAGCTGAACAATCAA
ATGCTATAGATGGAGGGGAAACTGGAGCAAGAAAATTTGATACATTTGCA
CGAAAAACTTTCACAGGTGTTGATAATATGCTTAGAGAAATTGGGAGTGA
TGGTGAATTTAGTGGAACGAAATTAGATAGAATAAACAATGAAAACGAAA
TAGATGGAGGATCTACTACTTTAGAATCGGAGGAGATTTTAGAATTATCT
TCTGATGAGCTTCTTCTACAAAACATTGAAGCTTGTATAGAAATTGTAAA
AGATGAATCCAAGAAAATTCCATTACCAACATTGTCAGAGCTCTCACAAG
ACTCTTCCAATTCTGAAAGTGAAGATATAGTTGAGGATGATGTATGTTTG
ACCAGAGTAAAAATCCCAAAATACATTCGAAAATTAATGATCAAGTCTAG
AGCAGAACTTCGAGAAGATGATGATGATGTCCCATTAAGCCATTTGATGA
AAAATGGACCATTTCTTTCTGGTGCGACCATAAAAGATGGGAAGTTGAAA
CGCCCAGTTGGAAGACCTCGTAAATATCCAATTGTTGTTGATAAAATTAA
GAGACCAGTGGGTAGACCACGAAAAGAAAAAACTGAAAACAAGATTGAGG
CAAAGATTGGCCAGGTATGAACCTACTACTCGAGATATTTTGGTTTAAAT
ATTGAAAATTATCGATATTTTTTGCTGAGTCAGCAGTTTTTCAGCATATT
TATCCACCTTAAAAATGAAATATATATACATTGAAAGTTGACAAACCATA
CCATTTTTGGATACTGCTAATTCCGAGCTATCCAGTTGTGGGAATGATCT
TTTCTGAAAATGCTCCTAGGAAAATGCTGACGTCATCGGAAAACGCCAAA
AACGTCGATTTTTCGCCTTAAAAATGCCATTTCTCGGCANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCCTATTAGGAGCAT
AATATCAAAAATTTGCCCTGATCTAAGGGGTGCCCTACGAAAACCATTTT
TAAGGCCTTTTTTGAATCTCGGACGCTGGTCTACTATGCTAGCCCACCAT
CATAAAAGAGCCCCTCAGTTTCAAGCAGAATCTGAAATCATCTGTTTCAT
TCGATTTAGCCACCAAAAAAGAAACGAGGAAGACCAGCAACCGCAGTTCC
ACCATTATATGGATTTTTCCATGATCCATATGCAGCGTTGTTTGATGATG
ATGATGATAATGATAGAGATCCTGTAAGTAATAAGTTAATATATATTTTT
TTAGCAATGGAGAAATTCCATATAATACCCCACAGTTTTGATGTAAAAGA
CCAGGAATGTAGAATAATTACAATTGAAAGTAACTCCAGTATGAAAAACA
CAGGATACATAAACTCAATAGAATCCAAATGATCTACATTTTGAGCTAAT
TTAGATACTTTTCTTTTGGTTTTTTGCCAAAATTATCCTACACTTTTTTA
TGAAATTGAGAAGAAATTGTTTTATAAATCTTGCAATATACTACTCTGTG
TTAACTTCACTTTCAATAAAACTGAAAGTACAGAGTTAAAAAAAAAACTT
AAATTTCTTAACAGTTTTTAAGGTATTGGTATCAGTTTTTAATAGAATGA
GAACAAGAGATTCTGAATTCAAAACTATTCAATATCTTTTTTCAGGATTA
TAAATCACCAACGAAAACATTAACCTCACCAATGGGAAACCGTTCATTAG
AGAGGTCAGTCAAACGTAATTTTTTATCACCAAACAACATGATGTCTGAG
AGGATGTACCAAGAAATCTACCAGATGGATGCGGGAGAAGACCAACATTG
GGTTTCTCAGCAAAGTAGAGTGCCAGCAGAAAAGAAGGAGTTATATTCAC
ACATTCTGGAAGAAATCAATAGAAGGATTGTCTCACAACAAGCTTTCTTT
GTGTCACTGGGGTAAATAATCTGTGGATTTTTTTAAAGTTAATTTAATAT
TGAAATACACCCCTGTATCACAGGCCCAATTGAACCCCAGCNAATATTGA
AATACACCCCTGTGTCACAGACCCACTTGAACCCCAGCCCCGCTGGAAAA
CTCAGCCAATATTTTGTAAAAATACCTTACATTTTCAGCCCCACTGGAAA
ATTGACTTTGATTTTATCTCCATTTGAAAAATTGCACTCCAAAACCATCC
CCATCATATTTTTTTTACCTGAGAACAAAAGGATTTCTATCCTGATCAGA
ATTTGAAAATAAATTTTCATCCCCACTGCAGGAAGAAGTTCCACTGGGGC
TGTGAGACAGGGAAATATTGGATGTTATTTAAGCCCTCTTCGGTGTAAAG
TCATTTTAACAGGCTGAATCATTTTGAGTGTGGTCGCGTCCACACACACC
TAAAATCTCTGCGGAGTTTGATTAATCACTTACCATAAATTTAGACTTAG
GTATCAGAAGAATTTAAAATTTAGTGTGATTGACCACATGTCTGAAGTTT
TCAAATGACAAAGCCTGTTTTAAAAAAATTATTAAAAAATATTATTTGAT
ACAGAATTAGTCTTCCTGGTACAAATTGAAGTAACACTCTATTCTTTTTA
TTTTCAAATTGAAATAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060830TCONS_00060830Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060830-proteinTCONS_00060830-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:97802..101920 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.19	6.79	4.06	3.16	74.46	57.04	54.29	55.77	29.41	33.19	20.19	14.86	10.7	8.46	11.07	11.84	16.61	15.42	8.18	10.74	11.58	10.67	13.83	14.81	23.02	26.68	20.36	12.77	15.64	14.8