XLOC_038216 (gene) - C. hemisphaerica

Overview
NameXLOC_038216
Unique NameXLOC_038216
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_349:472566..478578-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038216 ID=XLOC_038216|Name=XLOC_038216|organism=Clytia hemisphaerica|type=gene|length=6013bp|location=Sequence derived from alignment at scaffold_349:472566..478578- (Clytia hemisphaerica)
TTTTTGCTTGTTTGCTTCAACAAAACAATAGGTAAGTAAGAATTGTTACA TTTTTGTACTTTAAAATGTTTTATGTTTTTATGTAATATTTTAGACAGTA CCGGCTTGATGGTTTTCACAAAATATTAACAGTTTTGCTATAAACACAAG TTGAGAAGTTAGTTGCAGGATCTCAATGTTTAGAGTGTTTTAAATAACTG TTTTCTTGCGCTTGAATGAATTTGAAACTATAATTTAAAGTTTGTTTTTG CTTAAAATTAGCAACCATTAAAAAATGCAATTAACAGACCATTCGACTGT TCGAATCAGTTTAAGCAATGTTAATTTATGCCTTTTTGATTTAAACACGT ATTTTTGGCTGGTTGAAAATCTGGTCAGAAATGCTCGTCTGGTTAAGAAT GGTTTGATTTTTCTTTGTTTGGTTTTAACTGTGCTATGAGAGAAAGGTTG GTCTGCAAAACTGATTTTTTATATTGTAGTGAACTACACGCTAAGGGGGT ACATGTTTTAATTAATAATTTAGAGTATTGTATATCATGGTCAAAATATA TTGAGATTTAAGTGCATTTCAACGTTTTTCATAATTTAAAGTTCGGGCGA GATTGCTATTTTAGGTTATTTTTAGCTTTCTTTCATTGAATATTTCAATT TTGGAGGGGTTCGGTGGCTTCTAGGCTATATTCCAAGCCTTATTTGAGCA AATTTGAGCTTTTAAATCCTGAGATTCTGAAGTCTTAAAGTCTCATGTTA AAACTCAGAGTTAAAACTCTCTTACCAACTGTAGTTTAACGCACTTAAAA ATCATTTGTGGTGTTTAAAATTCCGCAGGAAAATCCCCTTTGTCTCAAAT ATTTTGTCCATGATTGAAGATTATGTAAAAACTATTTTCTCTTGTGCTCT TCCAGTCAAAATCACCAAAAGTTAAACAATGACAGTGGATTTTGATGAGC GGACATGTGGGTGAAACAACTGTCGTCACCAGTCCTCGTCTTCATTTTCA TCCTCCTCTTTATCCAAAATAATCATGGTAAGTCTAAAGGCTTGGGGACA CGAGAAGTTTTTTCGCGTTGATGCAATGCAACATGCTCTGTCCCACCAAC CTGAAACGCTTTCTCGTGTCTCCACCCCATTTTTCTTTTAATAACATTTG TGCTTCTCTAACTTTTGTTCTAATCAGCGTGTCTTTTGGGTATTTTCCTT ATTTTTTGTCCCGTGAGCATGTTGCATTGGGCTCTTCCAGTAAATGTCCG TACATGGGGGGGGGGGTGGAGGATATATTGTCCGGGGGTAGTGAAAAATC ATCAAAATTTGCCTTGTTCGGGGGTAAATTTTGCTCTGTCCGGGGGTAAT TTGAGTTGTCCAGGGGGTCAACTGATGCTTGTCTGGGAGGGGCAGGGGGC AAAAGTCACTTTGTCCGGGGGTAAATCATTGAAAATTGTTCATAATCAAA ATTTGCCTTGTTCGGGGGTAAATTTTGCTCTGTCCGGGGGTAATTTGAGT TGTCCAGGGGGTCAACTGATGCTTGTCTGGGAGGGGCAGGGGGCAAAAGT CACTTTGTCCGGGGGTAAATCATTGAAAATTGTTCATAATCAAAATTTGC CTTGTTCGGGGGTAAATTTTGCTCTGTCCGGGGGTAATTTGAGTTGTCCA GGGGGTCAACTGATGCTTGTCTGGGAGGGGCAGGGGGCAAAAGTCACTTT GTCCGGGGGTAAATCATTGAAAATTGTTATATCCTCTAACCCCCATATTC AAATTCTTTCTAAGCCTATTATACAATTTTTTGGTAAAAGTCCATCTTAG CCTAGGGGGCCTTTATTGAATTTATTCATATGAATTCCTTGATCCTATTT GCTTTTCCATGTAAGAGGCAATCAAGGAGTTAGACGATTTTTTATTAGGA GTAAATCAAAATTGAAAATTCCTTTCACCTAAGCTTTTTTTTCAAAAATG AGGTAAAATTTCGTTATGTTGAGGGTTCCTTGAAAGATTCCCGAAGATAA TATTGTCTTCAAAATTCATCTGCATGTTCTTTCTTACCTACTTTAATGGG ATAAATTTTCGCGGGGATTAAATTTCGCGGTTGAGCTCATCCGCGAACTT TTAAGATTTCGCGGGGATTAATTTTCGCGGATGAGGGATTTCCTGATTTT TCGCGGGGATTTAATTTCGCGGATTGGGGTACAAATTAAAATTTTTGAAA AGAGTCAAAACATTGAAATAAAATTTTTCCAGGAAATTAAGAATTTTTTT TTCAAGTAATAAGAGGGTGTTTTGGAATAGGGCGAGGTGATATGTATTAC AACTATCAAAAGTTGAATTTGAACTTCCATGGTGCGGAGCTAAATTTTCA CAGCCTATTTGGGAAAAAATCTTACATATCCTTTTAAATGTTTAATTTCA AGTCAGTTGGATTACCCTCTTGCATTGAAAAGCTTTTAACAATAAGCGAT CACTTTAGATAAAAATTTTTCCAATACCGCTTCCAAGTTTGTAAATTTGT GAAGAAAATTTTGAGGAAAACGATTTTTTGCTAACAAGCATATCGAGGAT TTGACCTTTTTCGAGGGTTGCCTCATGTAGAAAAAAATAAATAAAAAACG ATAAAAATAGAAATTTCGCGGATTGCAAAAAAAATTCAAATTTTTCGCGG GAACTAATTTTCGCGGATGGGCCTTTCTCAAATTTCCAATGGGAATTATT TTCGCGGATGACACCCAAATCCGCGAAATCCGCGAAAATTAATCCCCGCG AAAATTTATCCCATTAAAGTAATAGCCGATGGGGGGATTGGAATAAGCAG GGGTTGGAAAAATATACAAAACTTAATAAGCGAGGGGGGGGTTGGAATAA AAATGTCCTGGGTAGAAAATTTTTAAAAAGGAGGTTAATACTGCAGATTT AAAACAAAAGAGGGAACTTTCAAAAACATTTTCCCAAAAAAAAATAAGCG GGGGGTTGGAATAAGAATGTCCTGGGTGGAAAATTTTTGAAAAATTTATT AGCGGAGGGGGGAGGGGCTATTAGGNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNGGCTATTAGGTACCCGAGAGTAAGAATTGTTTGAAATTTGGTTG GATTTTCTCAATGTAAATAAAAATGTTAATATAAATTAAAAGTTTGCACA ATTTGAAAATGTTTTTTTGCATTTTCCAGGGTCAGAGGTGGACTCCGAAG AAGAGGCTGCTTCATTTCTTCTCCAGAAATCACTGATCAAAGCACGAATG AAAATCAACAGACATGTTATCCATAGACGACAAGCGTTATATCATCATTT TGTTGAACTGGAGGACAACTTTTTCGAGGAAAACGATGCAGACTCTGATA ATGATGCGGATGGCGACGGTCGTGATGTAGACCAAGAGGAAAACATTAGA CTAGAAACAAGGAATNTGAGGAAAACGATGCAGACCCTGATAATGATGAG GATGGCGACGGTTGTGATGTAGACCGAGAGGAAAACATTAGACTAGAAAC AAGGAATCTTACATCTGATGCCATATCGGATTCCACGAAAAACGAATTCG AAAATCCTTTCGATGACGAAGATATAGAAGAATCAGGAGCTCATAGACCA TCAGATGATCCCAATGTAGCCTACACAACATTGACAAGACAGAACGATGA TAAAAGTATTGAAACAGGTTTAAAGGATGGACTGCAGGCTAAGGTACAAC ACCCTGTTCTAAAGAGAAACCATACAACAAACAATACGAAACGTCATCAC AAAAATAATAACCAATCAACAACTGTTATAAAAGACTTATCCACAAAACA GTTTATTCAGTCGAAAACGTATGAACCACGACTACGTGAAAATAGAAGTA TTCAAAATGAACATGATCCTTTTGGAAAATTGAAAAGGAACACGACTTTT CCTAGATTCTTACCATCAGATAGAAGAAGATCGAACTCTACGCTTGGCAC AGGCATCTCTGATAGCGAAAACTCAAAAACAACAAAAATACAGGAATCAA AGCCAATGCTCCCTATAAATATCAATGTTAAAAAAGACTTTAAATCAAAT AAAACACATGGAGACATAGACACAGACATAGATAATGAACAAGACTTACG CTTAACTAATAGACTGAAATCGAACGCGCAACTTCGCACACGCATAAATG CTATAAAAGATTCACACTTGACAAACCGATCGAAATCGAACGGGCAACAG CGTACAGACATCGGTGTTTTAAAAGACCCACACTTAACTAACCGATCGAA ATCGAATGCGCAACTGCGTACAGGTATAGACGATAAACAAGTCTCACGGT TAACTAATACACTAAAATCGAAAGCGCAACTGCGTACAGACATAAATGCT ATAAACGGCCCAGTATTCGGCGACGAAATCATTCACCAAACATCAATTGC GCATGCTCCATGTCAACCACAACCAGGATGTAACCTCATGCTCATCCCAA ACACCGTCCCTTCACATAAGAACGAAGAAAAGTATTTACTATCTCAGGCG CATGCGCTTAAACAAAATGCTCAACTCATGTCCATGCAAGCGGATATCCT AGAACACGAGGTAACTTCCATCAAGGGCGGAAGCGGACAACACGTAATGA CAGTTGAAGGCGGCCACCCTTTACAAGGTTTACACGCCCATAATATGCGT TTACACAATGATTATTTTAATGTTGATAAACCGGTTCATTTGCCTTCCGG GCACCACGGGCACGGTCCGGAACACGGTGGTACTGAAGACCTGATTCATA ATGCTGAACATTATAAGGAAGGAGATTCTCATGACGGAGGTGGTAGCCTC AAGGTGGAAGGCGGGAGCAAGATACAGTCTATAGGGACTGGGTATCCGCA ATATAATTTACCAACCAAACCAATGGGTGGAGGGGGAGCTTCAGGTGCGG CAGGTGCTAGCAGTAGTGGTGGTTTATTCGAATTCGTTAGACCTTTGCCA CCTGCGGCAGGACCCAACCCGTATGAAGTATTGACGTCCGCTACCCTTGG TCAAGACTACCCAGGGGTGTCTCAGAAACAATCAGCTTCAGCCATGGGTT TCAACGAAGCTGGCGGAGCTGGTATGCAATATGAAGTGCTGACGTCAGCT AATCTTGGTAAAGAACTACCTGGTGTAACGCAGGAGCAATCTGCGGCAGC CATGGGTTTTAATAATGGCGGTGGAGGTGCTATGGTGATTTCGAAACCGA TGAAATTTGTTGTTTCTTTGAAAGGACTTAAAGTCAAAGAACAGAAAGCT CAGAAGCTGATCAATTTCACTGTAAAGAGAGATGGGGGTAAAAGTGACTA GGCTACATTCGAAACGTAAAATAAATAAAACGCGAAAAAAGAGGGAAAAG CGCCGTAAAAGACGAGAAAGACGTAAATTGAAGATTCATAACGGACGTTA AATTGATTGACATAAAATGGCTTAAGAAAAAATAAAAAAAGAAAAGTTGA AGTCTCGCAGTGTAATTGTAATTGTGTCCACTAAAATATCATTGGACGTT ATTGATATATTTTGTGCCACCCAAGTAGGCCCCAAATGGACTTTTCCAGA AAAAAAACGTATACCCCCTGCTATTCCAAGAAGGTAAGGTTTTATATATG GCGGAATTCCATAGGGAGATGCAAATGGTAGTAGCTTTTTAAATCCTACT AAAACTCACAATTCCAGAGGGGTTTAAACCTGAAATTGCCTGGAATTCCA GAGGGTTACAGCATTTCCAGCCACAGAGGTATGGACCTCCTCTACAGGGG GTATACGTTTTTTTTTTCTGGAATAGCCCAATCTTTTTGGGAAAACTTAT GAAAAGAAAGCAAACAATCGTGTTGGATGATAAATTAAAGTCGTGTTCAT GAAAAGATAGATAGATAATTGCAAATAAATAGACTTCTCTTCACTCTTTG TCTTTACTTTGGAGCCGGACAACGACCAGGGTCTCTTCTATCTCATCATA GCTGCGAATTCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060855TCONS_00060855Clytia hemisphaericatranscript
TCONS_00060854TCONS_00060854Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060855-proteinTCONS_00060855-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:472566..478578 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.08 0 0 0.11 0.17 2.05 2.96 0.79 0.61 1.61 0.93 1.8 1.79 0.85 3.98 0.75 0.59 0.15 0.06 0.35 0.29 0.3 0.26 2.69 3.47 0.15 0 0 0