XLOC_038250 (gene) - C. hemisphaerica

Overview
NameXLOC_038250
Unique NameXLOC_038250
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_35:58608..63823-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038250 ID=XLOC_038250|Name=XLOC_038250|organism=Clytia hemisphaerica|type=gene|length=5216bp|location=Sequence derived from alignment at scaffold_35:58608..63823- (Clytia hemisphaerica)
CAAATCCTTGCTGATTCCATATAAAAATTTTGTAACTAACAAGGTATACT TTTTAAACAAAAATAGAATAATCATTTCTATTACGTTTAAAGTTTATTAT TATTTAGGCAAATACTTTTTTATTTATTGGTTTACGGATCCGCCGACGTT ATTTTTGCCAAAATAAATAAAAAATAAAATAGAGATTTCAAAAGCTTTTA TTTACTTTTTCTCCTCCGACCTTCAAAAAAGAAGAAATAAATAAAAAACT TTTACTTAAACAGGAAAACAAAAGAAAAGAAGAGAAAGAGATAGGGGTTA AATGATCTAACACAGCTGTGCCCTATTCTGCCAATGTAAAGATATTTTGA TCCTTCCCTTAATGTCAGGGAACTTCCCTGTGGAATTTCCCTATCCACAT AAAATAAACTAAATAGATCAAACAATAAAATGGTCACTTTATTGTTTTTT TTATTTGTTCTCAGAAAGGAGTTAGAGTGTACTAAAATGCAACATAATTT TAAGAGCTCAAATTTACTTGCAATCCCTAGCTTTAATTTATATTTTAATT TATATGTCTCTTCAAAACATTTCTTTTAATTCTTTTACAGGACTCAAGAT CAAAATCTAGTAATTATAGGTATTATCAACTAGAAGATTGTGCACAATGG TTTCAGTCCTTAAAAATGGAATTGATACTTTTCAAAAGTAAGCTTTTACC TCTTTTTTGATCTTTCAATAAGCATTTATTTCAAATTCTTTAATGTTGAT TTCACCAAAATAAAGAAAAAAGCAGGAAGATGAAAAACAAAACATAAAAA AGCGACAAAAATTTCATACAATATGAGAAATATTTTTCTCGCTCAGATTT TCCAATATTTTCCTCACCTGAAGGCAATTCCATATTGCACTCTGTATTGT GAGGTAACGATCATTAAATCTTCAAGCCTATTGAAGCATTTTTCAATTAT TTATAATAATCTGCAATTAGAACCTGTATTAGAAACCATTTCATTGCAGC TTCTGCATATGTGATATACCTCTAGCTGCCTCTAGTCAGATATGATCGTT ACCTGTTTTAAAAACTGGGCTTTATTTATCCTTGTTTAATGATTTTCTTT TAGGTCCGTATGCTGTTTTACCCTGCTCAGTTAAAGTGTTCAAGTAAGAT TTCACTTTTACTTACTTTTTGAAAAATAGCTGATAGATTCAATGAAACTA AAGCTATTTAACCAAATTTTATTGGATCCTTTTCAAAAAATATTGTTTTA CACTATTTTGAATGTATGCATTGAAAATTTATCTTTTCATGTATGTTTTT ATTAATCTTTGTTATTTAAAAATATTTTATACCAGCAACAAGTCCGGCAA TCAATTAGAAGGAACAATATCAAAGCATAACATTATTAATAGGGTAATTT TTTTTATTTTTTGATCACTTGCTGAAGTAGTATTAAATAATCAACATCCA ATTAATGAGCAATATGTAGTTTGAAAAATATGATTTGAAAGTTTTCTTCT CCAAGTATTTTGTTTAAGAATATTGCTTTTTTATATAACTAATTGCAGTA GGTAATAAATGTATACTTTCTCAAATTACTGTAGACAATAAAATAACAAA ATAATTATTTAGATTGAATTAACAAAATTCTTTTTTTTCAGACAATAGAT GTTATAGTGAGAGATAGCAAAAATGTTACAGTGGACCTACATCTTGATCA GATTGAGTTCAATTACACTGGTAAGTTTTGGCTGTGAAACTCAAGTTTGA AATATTTAGAAATTGTTCTTTTTTTATCTCTCTAATATTCCTTGTCCTTG AGTCAAAACCATTTGGAGTTAGCTTTCCTCAAAAGTTTCTGTATTTTGTT AAAATTTTCTCTTAGTTTTTGAACTAAAAAATAAATGCTTGACTTAATTA TGATCTACATTATTATGTTTAGATAGTGGATTGAATGATATGCTGAATGG GAATGCACCATCACACAAGCGAACACATCATTCTGTAAGTGTTACAAATC CTGTCAAAATTCTATACATGAAATTTTCAATACAGTAGACAAAATGCTTG AAGAGCAGTAAACTTAAATTGTTTAAATTATTTGAAAAAACCTCTGTTCA TTTCTAAAATTAAGGAAAACGTTCTTCTTTTTTGGGGAAATCACTGAATC TTTTCAACAAACTATATTTCTTTATCATAGGTCACCTTTGAAAATTTGAT TGCATGGAAACCGCCAGTCTGGATTAACCTGAAAGAAAACTACTTGGAAT TGTTCAAGAAACTGAAGTCTAAAACGAAATCAGATTCACAATTTCTGAAA GCAAGATCTCCACCCCCACCTAGGTTAGGGGCCTGATTAAGGGAATTTCA AAGTGTAGCTTGACTGAATACAAAACTTTACAAAAGTGTAATGTTTGCAT TATCTCGTAGAGGAAATCTAGGAGCCATTGTCCCTAGTAAATATTTCGAT TTTTGGAGAAAATTATATGGCAAGTGTCTGGTATTTTGATTCATATTTGC TTTAAATTTAGGAAAAGATCACGGAGCATAGCATCATCCCTAAGTATCGA AAACCCACAGAGTGTTCCAACCAAATTATCGTTACCCTCACCCGACTTTC TCTCAAATCTCAGTGAGTTCAGGTAAGCAAGAAGCCTTTTAGTTTTTCAG AGTTTTACACTATGCTTAATTATCCAAATGAGGAAGAGATTAAAAACCAA AACCTTTTTGTGTTTCTCTCCAAGACTGTATGCTTTATGATGAGCTTTGA CCTGTAATGATTTTTATATTGTTTTCCTTTAGCCCAAACACAAGAATTAA GAAATTTATTGAACTGAGTGATCTCAGGTACGCTTTTTGAAATTCTGCTA TTTTGCTTTTTCACTATGCTATATATATTAATTGAATTTTCACTTTTTGG ACCATGTCCGTTCGTTTGTCCCTTCGTCCGTTCGTCTGTTATCAGCTTTT CTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAA ATGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAATTTAT TTGGGCAAATTTGGGCCAAAAACTACCTAAAATGGGGTTTTTTGGACTTT GTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAAGATGGAG GGCATGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCCGGAAAATTCTT ATTCGCCTTAAAAAACGGATTTTTGTATTTTGGGGGAAATACCCTTTAAC CAAATAAGAAAATATAGCTTTTCTCAATGTTGACTCATTATTTTTTTCTG ATTTTTTGCACAATGATGCAAAATGGCAATGCCTAAAATGTGTCAGAGCC CAATTTTCAATAAAAAAATATATTTGGGCAAATTTGGGCCAAAAACTGCC TAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTT CTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGA AGTGGTTTTTCCCGGAAAATTCTTATTGGCCGTAAAAAAAGGATTTTCGT ATTTTGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTCTCAAT GTTGACTCATTAATTTTTTTTGATTTTTTGCACAATGATGCAAAATGACA ATGCCTAAAATGTGACGAAGCCCGACAAAAAACATTTTTTTCCGGCCGAA AATGCCGGAAATATGCCGGAAAAACTGTTTTTTTGGCATTTTCTCAAGAT TTTATCATTAGTTTTTTTCTGATTTTTTTGCTCAAAGATGCGTATTAACA ATGGCCAAAACATGGCCGAGTTCGATTTTTGAGAAAAAATTTTTTCCGGT TGAAAATACCGGAAATCGCCGTGTTTGCAGATTTTCATTGGATTTTTTCC TTATATTCATTTCTATGTTTTTTACACAAAAACATTATTGATAGCAATGC TCACCATCAAGCATGATTCAATTGTCNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTATGCATTTTCGCTA AACGCTATATTTTCTGACTGATTTTTTTTCATTTTTCTCCTCGCATTGCT ATCTAACTTTCATCATCAGGTAGGTCCATTCAGCGTCTAGCTTGTTTTAA TTGCATTTGTATTTACTGTAAATTCACTACTGCCGACTCATTTGTTATTC TTTTAAGAGTTATCTGCGTTCCCAAGAATTTTTTCAATACTTAAATTCTA TTTTCTAATTCTATTCTTTAGTCACAGTCTGGGACCTTCTCCATATGCAA GCCCAGTCGACCATTCGCTATTTACATTTCCAACACACAATTCCAGAGAA GCAAGTGCTACGTCTACCCCAACAGAAGAAAGTCCAAGGTATAAACACTT GTTTTTGATATTAAATAATGTTAGATAAGCTGATTTGGTAACAAAGAGGA CTTTGACATATTATTCCGCTAAAGATAAAGAATCGGGGGGATGTAGAAAT ACTGAAGGAGACATTGTAGCTTATACTATAATTTCACATGTCGTCATTTT CTCCCTCAAAGAGTTTCTTTTCTCCCTCAAAGTGTGTTTTATCTCTTCAA ATTTTCAACTCAAATCTTTATTCCCTCTTTACTATAGTTTGTCAATTGGG AGTACAACTTCAACAATTAAAACAACTGATGCTCAACCACGATGTGATGA GATAAATATACCAAACAATTCTTCTTGTATCATCACTCAGCCAGTTCTTG GAAATCTGATTGAAAGCTCTGATAAAACTGAAATGGTGGATCATCCGATT ATAGGGCTGTTGAAAGTTGCAGAGAGGGTTGGTAGTGATAATAGTGTATC ATTAATGGAAAAGGCATCTTTAACAGACAGTGCACTATCAAACAGTGATA AAATAACTCATGCTGTCAATCAAAAAGAAAACAATGAAAATGTAATTTCG AACAGCGGACATTCTTGTAATACCCAGGCTACTGAAATTCAACTCCAACA ATTGGTTGTATCGAATGATTTACTTCTACCTATAAAAATTTCTGAAACAA TAACAAACGGCATTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060927TCONS_00060927Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060927-proteinTCONS_00060927-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_35supercontigscaffold_35:58608..63823 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.12 1.45 0.87 0.52 9.02 4.27 2.23 3.84 2.8 3.79 2.67 3.27 2.2 1.14 1.1 1.37 2.42 1.98 1.49 2.18 3.07 3.35 0.9 2.57 4.91 3.6 1.2 0.95 1.29 1