XLOC_038371 (gene) - C. hemisphaerica

Overview
NameXLOC_038371
Unique NameXLOC_038371
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:463643..473841-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038371 ID=XLOC_038371|Name=XLOC_038371|organism=Clytia hemisphaerica|type=gene|length=10199bp|location=Sequence derived from alignment at scaffold_354:463643..473841- (Clytia hemisphaerica)
TTCTAATATTTTTAGTGTTGTCAAACAGACTTTCTCATTTCAAAATTTAA GGTTTGTTAGAAACAAAAACAGCTTGAAAACTTACCAAAAAAACAACTGC AGTCTCCCAATCCACCAAAGGAATTGAAAGGTTATAAAACCATATTTTTA TATAGAAATGAATATGTATCTGAGGAAGAAAAAGTATTATCTGATTGGGA TCCAATGAAGGATTCTTATGAGCAGAAATCGTTTAACTCATATAAAGAAC CTACTTATGATGCTGATGTTACTGAAAGACACAATCCTGTCAGGGGGTAA GACAATCTTCATGTTTTTTCCTACCTTTTTTAACGCAAGTCAAATATTAA CTCCTTAAAATATTTACTGGGGAATTTTATTAAATGAAATTCCTTTCATT ATCATTTCAATGATTGCAATTTGCTGCTTTTTCTTTTTTAGGACAAGAAT ATCTCCTGCTAAAGGATCAGAAGATGAAGTGACCTTATACGTCTCAAATA TTCCCATCACTCTCAATGAGGTATGCTTTTTTTACCTAAGGGTTTTACAC ATTAAAGCTCAAAATTTCAAATGCTGTGTCCCACCAAAGATTTAATTTAA TATTGATAACAAAGAATTCACTTTTAGAAGCACTTTTTTCGTTTTAAACA TAGAGTAAAATTTAAAAATCTTGGGTGAACTTTGAAANTTCACTTTTAGA AGCACTTTTTTCGTTTTAAACATAGAGTAAAATTAAAAAATCTTGGGTGA ACTTTGAAAAAAACTTAAGAAATGGATAGAAATCTTTCAGTACTACTTTA CTTTACATTAATTAGGATGCTATACGAAACATTTTCAAACAATATGGAAA AGTAAGACGAGTTACCAAATGCAGACCTAAAGTTACAAATACTGATACCA CTTTTGGGTAAGAACAGAGAGCTTCTGTTACACATCAATATACAAACAAC CTGTTTTGCATGTACTACATCATTGTGTATATTTAGTTTACTCTAGGAGC CTAGTAAACAGTCACATCCTCTGCTTGTTAATTTTTCAATTTTTTTCAAC TACCCTGGACCCTATTAGGACCCCCTGTTCATTAATTTTTGAGAATTCTT TTGGCTGTCAAAAGAAAAGTCCCTTATTTGCTCAAGTAGTATAAAAGTAT GTAAAATTTAATTTATCCATTTCAGATTTGTTTCTTATGCACATGTAAGA GAAGCTTCAGAAGCTATTGCCAATTTACATGATTTTGATTTTGGCTTTGA GAAGAAGTTACGTGTCAGACTGGCCCATGGGAAAAAAGAGGATGATGGGA TGCATTTTGTTCCCCATAATATTGATATTAAGCTTGGTGGTGACTATAAA CCTCAGACAGAGACTATCAATGAAGATTCAGGAAATGATTCTCTAGTTGA AAGGTATTTTAAAAATGTTTATTATATAGACTGTAATTCTTTGTAGATTA TGTTATTACTAGATCCAGTACATCCAGTATGTCATTCGAGATAACTCAAT AATTAACTTCTTTTTCGTGCTTCGTCCCTTATGCCATCCAGCTCTGGATG ATATTTTGATGTCAAGGTACCACACTAAAATTATAGCCACAACATGAGAT TCTTTAAGAAAATTCAGCAAAGACACACAGAATGAAAAATAGTATATCTC TTCATTTTCAAATTCAAAATAAAAATAGTACTAAAACAATTCTAAGTTGC GCTTTCATCTTCTGAATGTCGATTTTAATTTTACGTTTTACTTTAGATTT GTTCCTTTCTTGTTGACTCTATTTTTTATTGTTTACCTTTGCAATTTATT TCCCAGTGGAAATACACCACCCAAACTATCAGAACCCATCAAAACAAATG AAGATACTCTGTTCAAGAGCATGTTTCCAGAGACCACTACCGACAAAGCA TCATTACATTCAACAAATCAGGGGTTTGTACCTGATGGTCCCAGGTTGTA TATTCAAGGAATAAGCACAAGATTGGATAAGGTTCGTTAACAATTAACAA TTTCAGCCATTCTGCATAGTTTGTCTCTCCCCCCTTCTTAAAAAGGGGGG GGGTTACACCTTCCGAAAAAATGAAAAAGGGGGGGGGGTCAGAAATTTTC ATGAATTTTCATGAATTTTCACTATTATGAAATTCGGTCTTAATGAAAGG TTAGAGTAGTCTGAGTGAATCAAAGTGAATAGAAGAAAGTAGTTTATTAT TTCGCTTTATCTCTCTAAAGCTATCTCACATATATTGTTAGCTATTTTTG TCAAAAATCCCTCGGGATAGGCATTTTTAAAAGCTGTTGGAAACACCAAG AAGGGGGTCTGCACTATGTTATGTAATAGCAGACAAAGAAGGACACTTTC TCTAGGCATATTTCACTAAAAATGTTCTTTTTATGGAACCTTTTGAGTAT TTACATAGGGCAGCATCTGATCGTCCGATATCTGAACACTTTTAAAGAGT GTACAAAATGACCTGGATTTCATGTCTTTTTATAGGAACACCTAGTTCCC CTTCCTCTTAGAAACCATTTTGGAACTTGAAAATAAATTCTCATGATCTC ATTAAACTTTTTGAACCTGTGTGCTTTTAATTTTCTTAGGATGCGTTGCA GAGGATTATTGGAGAGATTGCACCTTGCAAAGATGCTATACTCACACCAC CAAAGACACATAACCAATACACAACTTTTGGGTAAATACACATAATTGGT AGATCTTGCTTGATAATTCTTTTATGAGATAGATGATTTTTTTTGCTCAT GAGGGCTTTCTTTTAAAGAATATGTGTGTTTAGACATGAAATTTTGTTTG CTTGGCGTATTTTTATAGAAAAACTGGCCAAATTCGATATTATTTTTATA AGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTT CATTCTTTATGATTTTTTGCACAAAGATGTATAACTATAAACCCTCGTAT GTGACGGAGCTCGATTTTCGAAAAACAAAATTTGGAGGCAATTTTGGGCC AAAAAACGGCTGAAAAACAGGTTTTTTGGACTTTGTGAAAAATTGGATCA TTAATTTTTTCTGATATTTTGCATGAAAGTAGGGTACCATCATAGGTAAA AGATGGCTCAAGCTGATTTTTGCAAAAAAAATTTTGTTGGCTCAAAAAAC GCATCTTTATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTT AGCCAAATAATGATGATGAGATGAGATGGATGTTTTTGTTTTGCTCAAAG TCTTGAATATGAAAGAATATTTCAGGAGCATGAAATTTTGGTTTCTAAAC GTTTTTTTTATAAGAAACATAGCGTCAGCCTGTGTTTAGGTCCCAGGCAA AAATTAGGTCCCCCCTGAGTTTTAAGTTCCCCCAAAGACTTATGAAATTT TTGTTAGCACCCAGGACTTTTGAGGTCCCCCAAAAAAGTGGTGTACTTCT AGCCCCCTCCTTTTTTGGGAAAAATTTAGGGTGTAACCCCCTCCCCCCAA CCAGCAGGGGGGGGGCTGACGCTATGAGAAACAAACAACTAATTTTAATA GATTGTCACTGTTTATGTTCTGACTGATTGTTTAATGGTCAGGCTCACGT AGATATCAATTATATATGTGTTAAATGCATAACTAGGTAGGTTCATAAAA GTATCACTTGTTTTCTTTCAGGTTTATAACAGTTGGTAGTGTGAAAGATG CAGAAACTGTCATCGACCATTTCAATGATTTTGGAAACAAAATAAAAGTC AGTTATAGCAACAAGTCTGCTAAGGAATATAACAAGCCAATAAGCACCTC TACAGACGATGATTTCTACCTTAACCTACTCAAAGAACCAAGGTTCCAGT TTCTGGTTTTCTGTCTTCTTGTCAACTTGTGCGAACACCATTTTTATTTT TTGTGTTTCATAATTTTGAAGATTCGGACAAATTTCCATTTGGCACCAGT TGGCACGGATAAATTCTGAAAAAACACAAAATAAAGATTGTAGGTTCTTT ATCAGGCTAATTGACATAAAAGAGCAATGGTTTTAAGATGGGAGCACCCC TCTAATGTGAAGTCTCATTTATTAAAGTTTTGCACAGCTTTAATAGTTAC AAAATAATGAATTCTGAGTACTTTATAATTCATTATAAGCTTTGCTAAAT ATAAGGGGTTTATTTTAAATTCACACATGCAATTAATTTCAAACCCCTAA AAGCCCATTTTTAGCAAATCAATTTTTTTGCTTTAACTCTATTTTTATCA TAGAGGTGGGTGTTTTCCACCACCCTGGCTTTTTGCTAATAGCTCACTGA AAATTTTTTTTGAACGCTCTGAAACTTTGACTTTTAATATGATCTTATTA GTAACATGTATACCAAATTTTACCATGATACCTTCACTAAAATAGGTTTT ATGAGTTTTTTGTGCATGCATGTCATAAAATCCAGCTAAAACCCTGTAAA ATCTCAAATCTTGAAATAAGCATAACTTTCAGTAATTTTTGATGTTATCA TCAAATTTTAAGTATGAATAAGATGTTTCAGAAAATTAAAAAAAAAATTT ACAAAAATGATGTTGTTATCAAAAATGAATTTACTAATTTCTGAAAAAAT ACTCATCTCCTGCATATATTTTAATATATATTTTATGCTAGACAATATTC TGCCAACTTTCAAGTCCATAGAACCTCTAGATCAAAATTTATTCCAACCC CCAACCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAA AAAGCTTGATAATAATAAGGTTATTTGAACTTCAAAGATTTTCCTCATTA ATAGTCATGTTTACATTTTATCAACATTGACTTTGCAGTTTGGAATCAGC CTTTGGTGAGGATGTGGTTAAAGATCCTATTATTGAATCACCGCCAGCTC AAACGGCCTATGAACCTGTTACTATAACCAAGAACAAAGAATCACCCCTT GGAAACATCAAAGGACTATCTGCACTAGCTAATGTTTTGGATGCAAGTAG ATCAAAACCAATAAAAGAAAACTTTAGTAAGTGTTCGGTTAACTGCACAG AACTGCAGCATATTGTGTAAAGTTTAGTCTTTGGAAAAATAGATATGTTT AATATATTTCAAAGATAAATACAAATAATATGTTTTTCAGTTTTCATATA GGTTCATTTTTGTTCATTTTTTGTTCAATCGTCTTATTTTTCAGATACAA TACTAGCTAGAACCCCAAGTCCAGTTTCCGAGCCACAGTATACCCCTCTG AAAACTGCAATCCAAGTTGCTGATCAACCTGTCTGTGAACCTGTTTCTGT GGCTAAAAACAACGAATCACCCCTTGGAAACATCAAAGGACTGTCTGCAC TAGCGAATGTTTTGGATGCAAGTAGATCACCTCCAATAAAAGAAAACTTT GGCAAAGGTATGATACAGTAATTAACTACAGAATAATATGTAAAGTTTAG TCTCTTGGAAAATAATAATGATAATCTTGAGTTCTACTAATTGGAGATAT CATTTCATAATTTGCAGTTCTTGTTCTGTGTTAGCTGTCAAGATGTATGA GATAAATCTGTTTAATAATTTTGTTCAATCGTTTTATTTTTCAGATACAA TATTAGCTAGAACCCCAAGTCCAATTTCCAAGCCACAGTATGCCCCTCTG AGAACTCTAACCCAAGTTGTTGATCAACCTTTCTGTGAACCTGTTTCTGT GGCTAAAAACAACGAATCACCCCTTGGAAACATCAAAGGACTGTCTACAC TAGCTAATGTTTTGGATGCAAGTAGCTCAAATTCAACAAAAGAAAACTTG GGCAAAGGTATGATTAACTGCAGAATAATGTGTTAAGTGTAGTCTCTTGG GTTTTAATTTTGTAATTTTCCTGCAATTCTTTACTAAGTTGAGATGTTCT TTCATAGGTTGCCAGGGTTTGTATTGGGCTCTTCCAGAAAAAAACCATTC ATGGGGGTGGAGGATATATTNCTGCCAGGGTTTGTATTGCTTGTTCTGTG TTAACAGCCAAAGTATAAGAGCCTGTTTGTTTATTTCATCCTTTACATCT GTAGGCCAGATGACTGCCATCCATTTAAAAAATAGCTCAGTCTCGATTGT CAAAAGGTTTTTATATTGTTTTGCCTCGCTTATCTTCTTACTAACCGACA TTTGTTGAGACTTTGGGTTGGGATGGCAAGACAGCAACTTATTTTCGTTG TTTCAGCAGATTTCACTTACCATTTGCCCAACTAAAATGCACGCGCGGGA TTCGGAATGTGGTTTCGAGAAAGCAGCTAAATTATTGAGAAATAATTAAG AAGTAGTGATGTAAGATTTAAGATTGATTTCAGGCTGACAAACAGCCTCT GGGGATTTCTTTTTAAGCTAAATGACTAAATGGATTAAGATGATTTTATT CAAAAGTTTACTTCGATTCACTTTTTCCTTTTTTCAGATACAATACTGAC AAGTCCAGTTTCCAAACCGCAGCATAATGCCCAGGAAGAGTCACCAATAA CAGAAATTTCTTCACATCAGCAAACTACTACTCAATATGCTCCTTTAGAC ACTAAAACTCTAGAAAAATCGCTAGTCACCAAAATTATCTCACCTCAGCA AGAAATTAAAGCATCAAGCTCACCAGTAAAAGCTGCAACTGCTCATTATT CAGGAGAGGAAGCGGAAGTTTCTGTTGAGTCATTAATGAAAATTTTGGCT CCTGATATTTTACCTGCCAAAACAACCGATGAAGAGAAAATTACACTGGA AACAATCAATTCAGACACACCAAATGAAGAACGCCCTCCTACACCAGCAC TCCCAAGTGAAACAACGTTTATCACATCTGAAATTCCTTCACATATACAT CCCCTTGAAACTGTTTCTTCAAGAATCGAAGTGCAAAAACTACACAGTGA TTCTTATGATGCTCTAATCACAAATGTGGAAAGCCCTTCTTTATTTTATG GTGTACTTGTCAGCAAGGATGGCACAATAAAGACTGAGATGATGACTCAT GATATTGGTGCAACTTTTGACCGAAGAAAAGATTTAGTTTTCACCTTTCA AGCAGGTTGTTTGTGTACTGTAAAAATAGATAACACTTGGAGGAGAGCTT TGATATTGAAGATTGACGAACGTGATATTGATGTTTTTCTCATTGATTCT GGTAAAAAAATGACATTCAAAAAAGAAGAAATCAAACCTTTATTAAAAGA ACATAAAGTTGTACCAGCACAGGCTCTACCAATGAAACTGATCACTGCAG TCCCCAAAGATGGCAACTATTGGTCAGAAGATGCTACTAAGTTTTTACAA AGGATTCTAACAAACTGTAAAGTTAGAATTAGACCAGAGTACAAAGACAA AATGGTATTTGGTATCAGATTAAAGATCGGTACCCAGAGCATTGATAAAT TACTTGAGGATAAAGGTTTCGCCAAGCAAATCATGTGTGAATTGCCACAA GTTGCTCACGACTGGAAACCCATTCAATGGAAAGAAATAACAGGCAAGAT GGATATTCCTTTTGAGATGCCTGATAGAAGCGAATTTGAAATCTATGTCA GCCACATTAAAAGCCCTAGTCAATTCTTTTGTCGTCTTTTTGAACAATCT AAAGATTTGAAAGTTGACGAGGTTGAACAAGAATTAAAAGACTTCTATGA GAATGAGACCCAGCCTGAAGACCTATCGATCCATCCAAAAATGACTTGCG CTTTTAAACTAGAAAATGGTAAATGGCATAGGGGGTGGATCAAAACCATT CGAGATAAAGTAAAAGTGTTGGCTATTGATTATGGTTCAAACTATATACT TCCTACAACCTCTATTTATCCTCTTCCCGAGAAGTTCAAAGAATTACCAG CACAATCTATATCTATGCAACTCCAATACGTCATCCCAATAGAGGGTGCT CAACATTTCTCACAAGCTACCATAGAACGATTCAAATTGCTGACTTTTGG CAGAGTTATGATCGTTAGAGTGCGCAAAGTCCATAATACTATACATAGAG TGTTACTATTCGATAAGAAGACTGGGTGTAATGTTGGTGATAAGCTTGTA GAAGAAGGCTATGCATCAAAGATACACATTCCGAAACCAGGCAAACCAAC GGGTTAGTGTTTTTTTATTCGGATTTTAGACAAGTTATGTCTGTATCTTT TTTTATAAACGGGAACTTGATAATATGATAAGTTAACAAAATCCTAATTA TAATTAAATATCTCAAAGTTTAAAGGCTTGGGGACACGCAGGCCTGGCCC TGTATGGCGTGCTATTGCACTCGCACATGCTGACACACACCTAAAATGGT TTGCAAGTGCTAAAATAGCACTCCTAAAATATACAAGAATGTACAAAATC CCTTTTGCAAGGGCTTAATAGCACACCATAATCTATGACATATTTTTTAT GGAGTGCTATTTTGGCACGTGCAAGGTATTGTTCATGGTCAGGCCTGGAC ACAAGAAGTTTTTTTCCCGTTGATGCAATGCAACATGCTCCATTCCACCA ACACTAGAAAAAAATTAAGTGTCCCATGGTTTCTTTTTTTGTTTCATGGA ACAAAAAGTGAGGAAAATACCCAAAAGACACGCTGATTTTGTCCCTGGGA CAAAAGTGAGAGACACAAATGTTATTAAAAGTGGTAGAAAGAAAAATGGG GTGGAGACACATGAAAGTGTTTCAGGTTGGTGGGATGGAGCATGTTGCAT TGCACCAACGCGGAAAATAGTGTTCTCGTGTCCCCAAGCCTTAAAGTTTC AGTTTCTGGATTTTTTTAAAATGTACATGCTAAAGTTTAGTGTTAAAGTA TACGGCCAGGTTTCGGAATGTGTATCTTTGATGCATAGCCTTCTTCTACA AGCTTATCACCAACATTACACCCAGTGTACGTGTTAAAGTGTACATTTAG TAAATCTGTACAACACTGCTCTTCTTTGAGCTCAGAGAAGGTTTTATGAC TTACAACAGTATAACTCGTCTTTTAATCCATTTGTTTAGGCTTGCCTGCT GGCTCTCCTGATAAATCACAAACACCTGGTGGCGTAGCTCAAAATGATGG TCCAAGCTTTGGAAGAGGAAGAGTGCTTGGTCGTGGTATGGCTTTGATGA AAGATAGGGGTCTCCTAAAGCCCTGAGCTCTATAAAAACATCTTACTTTA GTATTTTACAAGTTTGTTGACGTGAAAGATGATATATTTTTCTAATTTTC AAAGTGGGAGCATACACAACACTTAATATTTTTGAAATAAAGGTAAAAAA TTCAAAGTGATTTTGAAAAACAATGGCTCTTTATGATATCATTTTAATAT TAGTTATAGTCGCGCGGCTGAGGTCGAAAAAAGTGGCTAGAAAATGATTT TCGTGATACACCTCTTAGATTCCACTTTTTTCGATGGAAACTCTCGAATT AGTATGTGTAGATTCCAAAATAAAAAAGTTTCCACGATATTATCGTGCAA GTAACGAGTAAATGGCGATTTTTTGCGTTCCCAGGCAAAATTGCAAGGCC AGGAAATTCATGATTTTTGGAGGGTCTTCAAATTAAAAAAATACCTATAT CACATGATAGAGCTCTTCAAACTGAGCAAAAAAGTGTATAAAACCAAAGT CCCAACTTTTCTAGATCAAAAGTTACAGGCCTATTTGTGGTCAAAAAGGT GTTTAATTTTGCATAAATTAATGCAGATTGTGGGGAAATTCCCTGTTTTC CATCAGTTTTTTACCACAAATAGGCCANNATACTCGTTTTTTGCACGATA ATATCGTGGAAACTTTTTGATTTTGTAATCTACACATACTAATTCGCGAG TTTCCGTTGTTTTTTTTGGAATCTAAAAGATGTATCACGAAATGAAACGT TTTTCGACCTCAGCCGCGCGACTATTATTTCTTGTTGTAAATAGTTTGTT AAAAACAAAAAAATCTTTAGAAAGCATTCATCTCCGATGCAGCAGGATGC AGTGCAGTTTAGTTTATAATGTACCTAGCTTATGTTACCATTTTGTATTT TTTATTTCAGGATGATAGACTGAATAAAATTATGTTTTTATTATGTTTCT TCTTGGGCTGACCATTAACATACACACCTTAGTCATTGTTAAATGCTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061171TCONS_00061171Clytia hemisphaericatranscript
TCONS_00061170TCONS_00061170Clytia hemisphaericatranscript
TCONS_00061169TCONS_00061169Clytia hemisphaericatranscript
TCONS_00061168TCONS_00061168Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061170-proteinTCONS_00061170-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:463643..473841 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.4 30.9 33.93 38.62 28 21.97 15.87 16.62 8.88 12.63 9.06 7.32 9.38 10.13 9.65 11.75 12.74 11.4 2.83 3.02 10.56 10.58 30.98 28.74 14.16 17.34 4.81 5.19 25.74 31.53