XLOC_038484 (gene) - C. hemisphaerica

Overview
NameXLOC_038484
Unique NameXLOC_038484
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_356:4121..7958+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038484 ID=XLOC_038484|Name=XLOC_038484|organism=Clytia hemisphaerica|type=gene|length=3838bp|location=Sequence derived from alignment at scaffold_356:4121..7958+ (Clytia hemisphaerica)
GGTTGAACGATACTGTAATTGATTCCTACATTAAGTACCTGCTCGAAAAT
GTAAgacattattattttttaattttgtttttttattttgaaattttatt
tttaataattatgtTCATCAACCGTATCTTTGCAGTGTTTCTGGAAAAAC
TTANgacattattattttttaattttctttttttattttcaaattttatt
tttaataattatgtTCATCGACCATATCTTTGCAGTGTTTCTGGAAAAAC
TTAATCCCCGCATGATCCCCGTAATggcaaatgatttttttgtttgttga
aaaaaaaaggagAATGTTATTTTCTTTTGGATAAATTCCACAGTATATCT
GCGATGCTATTTTAGATTTCATCCACTGCCTACATAGAATCAGCTATTAT
GCACGAATTGATTAATGGAAGTAAACAATATGTTATGCCCCCTACAGTGC
AGGTGATAATTGAATACATTATATTTACCATGAAAAAGACACTTTGTATC
CAATTTTCTCAACTTCTACGAATGTTAAAGAATGAACTCTATCTATCAAA
TTAAATAGGTGTATGATTGGATCAGACATaattctttttataaatattCG
TAAAACTTGAGAAGAATTGAGTTCGAAGGGTCAAATTTATTTNTAAAGAA
TGAACTCTATCTATCAAATTAAATAGGTGTATGATTGGATCAGACATaat
tctttttataaatattCGTAAAACTTGAGAAGAATTGAATTCGAAGGGTC
AAATTTATTCGTGGTGCACCCGGGGGTGCACCCGGtgtttcattctttca
tttgtTCGTTCGCTTTGAGATAAGGCTTTGGACATTTCTCTTTTTTGAAG
TCGTTTTCAAGCGATATGTTGTTTAATTTTGTACTTTCTTTATTTGatca
attttactatttttccaTTGTAGGACCTATTCTTAACCGACCAGTTGATT
GGATTGTATAGTGTTGGAAAACATTGGCGCTTATTGGTGAGACGCTTTTT
GGTAACTAACTCCTATCTTGGGAGATGAAACACTTGCATATTTCAACGCC
ACGAATTTCAGTACTTCTCGGTTATATAACGAAaaactttgacatttttc
aagaaataaGAGTAAGAAATATTACGGGTATTTCTTTCTTACGAGTCTTA
GACATCGATCAAAGTGCCTGAAAAAGGTCTTGCATGCGAAGCGTTaccaa
taaaattttgaaacttaatttcaattttttatttcaaaattatcaTAGGT
TGTATATCccaaaaaacaaattatttgGTTAATCGACCCTTTTGGAGAAT
CCAGCAATATCATGGAGGAAACCAAGCGAGCTTGGGAGTAAGTTGTATAT
TGTTTCTCCTTtaattgatttatttattttaatttttttgaagttcAATT
GTAACAGTAGCAACCAGGCTAATAAAGTTCAACTCTTTATTTACAATAAG
CAACTATTCAATGGGTTAACATTGGTTTTTGAGATTTATTAAACCGGGAT
GCCGCGATATTCTCTATTCTCAGTATTTCTCAACTGTAAAATATGTTCAT
TTGTAGTTGTAAACTAACTTTATCCGTCAGTTGGTAGATAGaggtttgaa
aatgtttttgtcaattacattcgacGGTCATCATTTCGACCTTTCAAGCG
ACCAAAAGGAAGGTTAGAGATGGAAAGAGTGAAAGTTCGAGATGACGAAG
GTTTTAAGAAAAGATAGTCGATCACGCAATGTATGGCTTAATACGAATTT
TAATACAACTTTTTAGAGCAAGCATGTTGAGAAGTTTCCCTTCAAACAAG
AATAAAGCGTGGGATATCATCCAGGTCGAGCATGCAAAACAATCTGACGC
TATTTCATGTGGTGTCATTTGCATAAAGGTGAAGGGAGATTTTCGTTTTG
TGGAAAAACCAATAACTCAAAAATTTCTCAAGGAATTATTTCCGCAAAAA
CGGCCAAAATTAACCCTTTAAGGTAATTTTGGCTGACCTGGATTTTGTGA
GCGTCAAATATTCATTTTGTGGGAATGAATTAGCCATTTTTTGGCCAATC
TCTTGTGTTTTCATAGGACTTTTTCAAGCGtgaatttttctttagattca
GTAATGCTGAAAATTATGTCTTACTAGAAATTCACTCTTATCTTCTAGTT
TGCGGAGTGTGTTTTAAGGCACGAAAACCTTCCAAGTCATTTTCATTCGG
ATGAATTGATGAACCACCGTCAAAAGATCGCTGTAAAATTGATTGAATTA
GGAAGTAAGTTTATCAGTATTATCAGACCGTTTATTAGTATTTTTACATT
GCTGACTTGTGAATGATAAATATTGTAATCAAATTGTTGGTCAAACAATA
TTTCTGTCAAGAGAATCGCCTTAATTAGATaagtatttaaatttttattt
gacttcTTTTTACGCAGGCAACGGTGACTGGTGCACAAAGATTTGCCGAA
TATGCGATCGGTGCGATTCCCCTCCATTGTCAAAACAGACTGGAATAAAA
CCAAAGAAATGGCCATGGGTAATTATCGTGTTAATTAGCTAAAACAATTC
TCTATTTACTGTGATGAACTTTAAGAACTAAAACTTAATATAATTTGATG
GTTATATGAAAATGGAAGATTTTCTGCATTGAAACAGTTGAAAGTGTTCT
ATTAAAATGAGAAGAGGTTCTTGTCAAATGCTTTCGTATTGTACTTTCTA
TTGTGCTTTGTATTGTGTTCGTATCGTTTCTTTGTAGGTTTGTTGTGACA
TTTGCTCACCGGTAATGTGGTACCATGGTCATTGCGTCGGGGtaacaaaa
acacaaaatatgaaaaacatatCATTTTATTGCAATAAAGtaagtttaaa
ataaaaaatccgacaattttgaaaattgccaatataaaacataaattttt
tcgTCGCTGAAAttgatttgtaatttttaattttttcatgtaGTAAAAGC
AAAGTTTACCTTATTTTTTGCCAAGTTATTTTAGAACTGGCTTACTCGCT
AAATGAAATCTCCACCAAAAACGCACTTCCGTTATTCGCCAAATATAATA
cacgcaaaaattaattttcttataagctATCGATCGAATTCACCAATTTT
GCCCGAACTTCTCTTTAGGAAATTTTGTTCTGTAGAAGATTCTTCTTTCT
AACCATCTTCAAGAATATATCTGATTGGAAAAGACTCTTCCTACtgtgaa
aaaattgtaaatgcacggttaaatttaattttggtaattttggttCAAAA
ATAGGATTCATTATCTCCAATTTCACACGATAGGTCAGCTAAAAAAATGC
AGTACAAACTTGCAGTACACTAATAATTTTTACAATGTTTTCGTATTTCA
GACAATTATACAGGACGAAATTGTTTCTTTGCAAATCGGTGAGACACTTA
TTCGCCAAAGAAAAAATCGCAGAATAAAAAGATGCTACGGATGCTCAGAC
GAGATTAGCGAGTCGCCCCTTGATCCGCCTCACGATATGGTGCTCCTCCA
ATTAATGAGACGTCCCAAGCAAAAGTGCACCTGGGATTCCGTTAAGGAAA
AGGACTTTGCGATTTTTCGTTTGCATTATCATGCGAAAAAATATTGCATA
AGAAATTTGTCGTTGGATAAAGTCAAACTGTCTCGTGATTTCCAACTTAC
TGAGGTTCACCGTCATCAACTCAAATATTTGGGTATTTCATATACATGAT
TGTATATGCTCTTGTGTGCCTAATTGTATGGGGGTCAAAAATTGCACCCC
ATAATCACTTAATTATGACACCCCCCATATTAtggttttttctgaaaaag
tgcaaaaccttcattttcctagggctctttaggaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061335TCONS_00061335Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061335-proteinTCONS_00061335-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_356supercontigscaffold_356:4121..7958 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22	0.23	0.19	0.08	6.51	5.44	8.54	10.29	10.08	11.65	11.29	13.27	5.88	8.52	0.83	1.26	0.64	1.05	0.23	0.23	0.38	0.76	0.33	0.41	10.47	10.03	0.15	0.43	0.26	0.45