XLOC_038515 (gene) - C. hemisphaerica

Overview
NameXLOC_038515
Unique NameXLOC_038515
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:146928..156537+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038515 ID=XLOC_038515|Name=XLOC_038515|organism=Clytia hemisphaerica|type=gene|length=9610bp|location=Sequence derived from alignment at scaffold_358:146928..156537+ (Clytia hemisphaerica)
CCATTTTCTTGGTCGGATGTTGGGAAAGGTAAGTTAAAGAATCCCGATTC CTGGATCGGATTATCCCGATacagtttttttaaaataactttcgaactac tctttcaaatttaatgtattatagctcaaaattcaagttagagcattccc tatacgataaaaaaagaatgaacaaaaaatttaaatcttgaAGCTCACAA AtttctcgacaaacctgtatacttggAAGTTGGAAAAGAAACCGTGACAG GACAAATGCCCCCCGTGACAATTGCCCCNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGAATTCCCATGCACATG GGctgttattgaaaaacaaaatgaaaataaaaggctTACTGGaaaagtgg gacgtgggacggtggctcaggtgggacgcttaAGTGGAACGATGCTGGGA CGTTCAGGTGGGGCGATgctgggacgctcaggtgggacgctcaagtggga cgatGGTGgaacgctcaggtgggacgatGCTGGGACGCTCTTTCATTTTG TCGCTTTAATATTCTTGGCTCCGAGAAAACCCAGGTgcgatttatttatt catttattcattcatgaaacttaaaaaaacgttttcaaaaaaattcagga tatttcaaagatgaggttttttataagaacattaaggctaaaatcttttt ttacttttgacaTCTGGGGGGCAATTGTCCCGGGGGCAATTAtccggggg gcaattgtccggggggcaattgtccTAGAACCAAAGAAACATACTGCATA GAGGCTTTAGTtatgaaaagtgaaaatataTTGTCTATTTAATGTGTCCA AGGTTATCATTTACCGAGCTTTCGTAAATGTTGGTGTCAATTTTCTTCTT AAATTCGTTTTATCTTTTATCCATTTTGTCAGGTCATTTATGAATCAATG ATGGTCGAATTGCCGTTAGCCGATTTTTTCCTTTGTAAACTTCTCAACAA ATATGGCGCCGATATTGACATTCATCATTTAGAATCACTTGACCCAGATC TTCACAGGTAACAAAGCCGGCACAAAAAGTCAACGCAAGTTTTTAAACGT TTATAGTGTCCGTAAGACGTAACGTTTATAGCGTCCGTAAGACGAACTTC AAAACAGTGTATCGTCTTTTGGGAAAAAGCTGAACCGATAAGAGTGTAGG CTGCTGACATCCActaacctttttttttcttgcTAGGAATTTATTCGAGT TGAAGAATTATAGTGGAGATGCGGACGACCTCAGTTTAAATTTCGCTATC ATCAAAAATCAATATGGTGAAACAGAGGTATACCAttcttcccagctggc acacaacgttgtttcaacgttcatctaacgttcacaacgtccatataacg ttagatgaacgttgaaacaacgttgtgtgtgaGCTGGGTTATTATCAAAA GGTAGAAACTCATTTTGTCTCAACTACAGTATGTTAGACCCAATCCCATC CCGGTAAACACGAAGACGTCTTTACCACGTGTTTTCTCGTTTCCAATTCG GCAGGACGTCTTTGAACCAGTTTGAATCGTCTTTAAGACGTCTTCACTGG GTTCAACTGGTACGAGTCAAATATTATCATATTGCAAACACTATGCTCTG CTCTAAATATTGTTCAGAATTGAATTTTCAACAGTAAATAATACTTGATA GTTTGGAcaccttcaaaaaattttcatgacgtcagcgcttctgtcaattt ttttgttcagaatACAATTGTGCATGTCTGTGCAAAGTGTCATGCTTTTT TCACAAACTGAAGTATTGTTATGATATTTTGGTTGAACAGACTAAACTAA AAGGGGTGTGGTGAATCTGACTTGGTTGAAACACGTGACGTTGCTTTTTG CTTCAAAGcgaaactgggttctaatgtttatgcATGGCGTTTGATTTTGG CCTTTAGAGAAAAAGGTACCAAGCACTGGTTGTTATGTTGTTTCACAGTG gatgatttttctttaaatcgaAAAACTGGCAACAGCTCATTCCTATGCCG GTCCTTTTATTACTGGCTAGCCAGTTTTTTAACGCTAATGTCTTACTTTA GGTATTTTTCCATCATAGGACATAAATTACGCCGAAGTTAACTGtttagg ctttatttacgtaTTTGATATTTGTTTGTAGGTGGTAGAGCTGAAACCAG GCGGAAAAGATATATGCGTGGATAAttcaaataaaatagaatacaTTCAT CTTATGGCTGACTACAAACTTAACAAGCaggtttgtgtttttttttttag gtcAAACATGACCACTAGTTGACCAGAGGCAAAcctaggcaaaaatgggt gctggatATGTGCGGTCGGCGGTAAGggttggtctctctaagggtcggaa aattcatgatttttaggaaatttttttgatttcgagAGAAAGAATTGtta taaagtctctctaagggtaggacttttttcaaaaatggaagaaaattttt caagaaagtctctctaagggttaccttttccgcaaaaatcagtctctcta aggttcTGTTTTAAGAGGTCTAGttcgcacatacccctcatctacaaacc ctagtaccccccccccctggaccaGAACAATTCTTTTTCGGGGAAAACTT CCTCGCTTGCACCTCTTTTCCCCCAGGTTTATGATGATTCTCTCAATGTA GCCTTTAAACGGGCCCcaccttttggtaatttttcTATATTATTCTAACC CCcacggaccttattaggacccacccttttattaattttcgaaaatattt tcagctgtcaattGTTGTTTTTCACCTGAGAGTACATTGACAAACTCTAT GAAAGGAAACTCTATAAAAGGCATGAAATTGCCAAAAGTCACGTCTTAGA ATTCGACTGTTGAAAAAGCAACCCTTTCCTGAGTTGATTTGTTTAAATGT ATTAGGTCGTAAAAGCAAACAGTTTAAACACGTTGTAAATAACATGATAC TTGAACTCGTTACTGAGTGTTTTTTAAAACCATTAAAGTGCAATGATTAT CCATTGAGATGACTACATTCAACAGTGTTTCTATGGTGTTTAACcatgat atttttgaaatctcgTTTTAAACTAGAGTCTTTTTTtggttaagtttttt ttaaccgCCATTGAAAGGGCGGTGCTAAATAGGGGAATACAGTGCGATCC ATATGTTTGCTATCATAGGAAAAAATCACACTACGACTAAGTCAAACTCG TTTAACCTCGAAATTAAGAACACGTGTGAGTTTTCAAAATaacgaatgtt ttttttctccaagTAACAAGCAAATTAACACAGCGTGGTTTTCCAAAATC ACGCGACGACTAAGTCAAACTCATTTCACCTCGAGATGAAGACCACGCgt gtgttttcaaaaaataacgaATATCTTTTCTGCAAGTAACAAGCAAATTA ACACAGCGTGGTTTTCCAAAATCACGCGACGACTAAGTCAAACTCATTTC ACCTCGAATATATACCACTATAAATTCCACAATataatatttacaaattt gaaaataactttatgATATTAAATTATAACGTCGACgacaaataaagatt tgaaataCGTTCCTTGGCATTTAGCGAAATATTTGTCAGACTTTGATTCG ATTTCACGCGTGGGATTTCCGATTTCACATGCGTGTGATTCGCGTGGGAA GTACCAATTTCACATTTTGTGATTATTGAATTTCACACGCGTgtgatttg atgatttttcctGTGTATATTGCTACCTGATTAGCTCTTCctataacaat ttttttctagttGAGAAATCAGTGCAATGCATTCAGAGCTGGATTATCTG ACGTCATCGACTTGAAATGGTTACGGATGTTTAGTCATAATGAACTCCAG GTAGGTGTTCAAGGTTATATTTTTACATacgtgttcccgtttcatatcgg acacatatttcatatcaggacagtgtctgcctattgttatattatgctaa tGTAAGCAAAaagatgttgttttttcctctttttgatcAATCTTGCtaca catccgtgtcaattcaatataaaaaagcttgtgaattaaaattgacgagt aagcaaacaatatcactcttatttaaaaacaaaaccttcaaaGCTACTGT TCAGCCAATGGATTATTATTAGTGTGGGACGATCACAAATATGTTGCTTA AAATCACAAAGTGGCATAATTGTTATGTTAAAGGCTTGGACATCCTAGGT ACTTGTGGAATCGAATTCGAccacaatagacgatatcgcgtttagataaa tgcaatgcattctggtaNCTGCTAAAatgttgaaagttgaaagtaCAACT GAAAGCCAAGGTACCATTAAGGGGGAGTAAAAATTGGGATATTTCAATgg acgatatcgcgtttagataaatgcaatacattctggtttctcggggactc tcaaaggaattataatgtcgattatataatgatctggaatagattataat tcccttgagggtccccgagaaacaagaatgcattgcatttatctaaacgc gatatcgtctattagcaAACATCTATTTTACGCTCTTGTGTAGCAGGGGG ggagtaaaatctcagacataatgacgtttgcTACGGTGgcggtgtgacga aaaatcgttactacccagggtagttaaatactaaaatgggtggtatatat gtgttaaatgttgaaaagattttactacctgggtagttaaaactggtaaa attagcaaattttagctatttttgtaattcttttaattttttggatgact tttctgaaaaaaatcagaaaatgtttataatttgaaaaaattttctgttg gaaagttgtttgctgctaagtgcataaaattaaaaacttgccctgatcta aggggcgCCCTATGAAGTGACACGATTCACTACCTAGGCCGCTGGTCTAA AATTAAATTAGGCTTTGGCATTCGATCAACAATCAATATTTACTGTTTCT AAACTTCTTCCCTTTCAGATTTTGATATCAGGTGCACGTGTAGCGGTTGA TTTCGAAGATTTGAAGCAAAATACCAATTATTCTGGTAAGTGATTGATAA TTAATTCAAAAAGTTTCAGAATCATGCGACATGTTTCAGGCATTGAGTCT CAAGCCCGAAGTGCTAGAGgtgagactcctggatgggaaatgaaaccact tatttcccatccagaacgcccgcgcgtagtttttacacaaacgccggatg cTGAACAAAAATTGTaatcctccaaaacaaaggaactgctagatacaatc cgtcgtcacgattacggcgcgttctaggcgcgttttggatgggaaatgag tggcttcaatttctatTGCCTGAGCAGGGtcaaagtttcgcctctagccc ttcgggcttgaaactcaatggcttAAGGGTCCCCCTCTTAAGTCTCTCTC TAAAGGGCTGGTAAATTAAATTTCAtgaaaagatttgtaaaaagattcga attatgaaAATCATTCTAAAATGATTGTTTACCGAAAAAAAAGATAATGA CAACCAAATCGTTGCATtcgatttttcctttttttcattcTCTTCAAAGA TCACGTCTTAGAAtcttagatttttgaaaaaaaagaaaccctTCACTAAG TTGATTTGCGTTAAATCTATTAGGTCGTAAAAACAAACAGGTGTGAATAA CGTTATACTTGACCTCGTTACtgagtgtttttgaaaaaaaatacacgttt atttataagaactttaagTTATAAGCCTAATAATGTtctaaaatatcttt attttttaactattttgtgagtatatttttgtaatttccttAGAATTGAA TgctttagagtccacaaagctttaaaatgttcttatattgcTCTTATAAG TTTCGGctatcgaagtcttatgttcctATAGAGTTTGTTCCTATatcttg tttttaatattttggccatcaaagcgtTTTGttcttctcataaaaaaacg tgtaattaatCCAATAAGAAAGCTGTATTTTCCGCATCATCCgatgaaaa ttttctatttgattTCCAGGCTCTTTCAAAGAAGAGGATTCATACATCAA AGACTTTTGGGCCATCATTGAAACATTAACGGATAAACAAAAACAGCAGT TCTTGAAATTCGTCACCAGTTGTTCCAGACCTCCTCTACTCGGTTTTTCG GTGAGTAAATCATtggaatttcttttatttttactaATAAATGGCATTGA AACGTAATTTGATTATCAGACAGATAGCTTTGTAGAAATTCAAATAACTA CATAAGAGCAAAACTATGCCGTTTCTCAACGGTTCAACTTTATTGTCCAC TGAAGAAAAACCTTATCAGTGCTATAATGCAGTTTTTATTTTGGTGCAAT AGCATACCGtggtgaatctaaaaatagacatcgaTTTTTCCGTTTGACAA AAATTCTATCCCATCACACTTTGCGTTTATTACGCTTACACGCAAATTAC ACTcgattacaaagaaaaagtaataacattCACGACTTTTGAtttaagac gaaaaggattgtgggattaaatttcggtcaaatgataGAAGTAACAATCA CGACGTTTGCATAACGAAGCGCTATTTACCCAACAAAATCATCctttttc aagtgttttgaggCGAATTTTATTGTCTTTGCTACTGTTTCGAAAAAGTG GAATAGATGTTAtgcgtagaaaaaaaaatatcgtGGCATTTAGCGTAGTC AAGAGAGAAAGCAGATTTTGTTTCCCTCCCCCTGACCCTCCCGGTAATGC TATTGAAGACAAGATAAGCGCAATTAACAATGAAAACCGTTGATTGTTTC ATGGCAACTGAAATTGCCCATTTTTTAGATATAATTTATAATTGGTTTTT CTTACGGCACCGCCAATCCTTTCACTTTATTCTCGACTACAATCCATTTC TCATAATGGATTCATATTTCTGTTTGAAGGcacagaaaaataaataagaa gagaaataaaggagaaaataagaaaataaatttttgcgagGAGAAATTCG CCTAAATTACTTTTCGCCAATTTTAATTCGCCAAGGTTAATTCTCGACTA ATTTTAATGATATTGTAATTTGGTCCAGATTTTTCCTTATACTAAAAATT CCTTTTCGCCAAAATTTAGTTATCCAAAATTAATACCTAGGCCTAGttta atcatttttgatttggttcagatttttcttaagaaattccttttttttca gctaaaattttcataaattaacgGGTAACTTGCAAAATTGATTGGCAGAT TCTCGCAAAAAAGTTGCACGAAAATTGGTGAATTTGCCCGTTCGTCAAAA TTTCTTCGCTTAAGGAAGTTGATTGAACACGATTAAAGGGTTTTTTATTA TAGTCCTTCTTGGTATttgtagcctggagatccatgctatgatttcttat tttatatactgatggcaaaatatatagcatggtttgggctgagagtttga atttcccagatcctaataacggttgaaaacacagccaatcaaattttgtt attcttttactggtcatacttttttaaagaaagcgcaagttccgaaattt ggtttttattttagtaaaagTAAGGACAGCGGTAAATTCGAATTTCTCAC TGTAaatttttgaggcagaaatctgcctcacaggtcagacccgtcctgta tacatcagattataaaaaaatacaggacggttctcctgtctatGGTATTT GTTGCTACAGTCAACTGCAGTAATGaatttatttctcttttttgcGAAAA GAAAATGATATTTGCTTTGAAACATGATTCNTCCTGTCTATGGTATTTGT TGCTACAGTCAACTGCAGTAATGaatttatttctcttttttgcgaaaaga aaattatatttgctttgaaacaTGATTCTTTTTCAAGATCCTTATTCTAA AGACGTCTTCAAAAACAgatgttttcaattttgttttaacaAAGTAAAGT GactttataacatttttttcctCTTCTCAATCTTTCCAGAATCTTTTTTC ATGAAGATTTATGAAAACCGCAACATATCATCTAGGCTCATGTTACATCT TAGAAAAAAGTTTCCCTCGCTTTTTAACGGATAATTTGGTTAGCGGATAG CTTGGAAGCCAGACTTATCCTAGAAATTTATCACCCTTTATTCTTCTCCT TAGAAGCTGAATACTAAGCAGAGGGGGTATCAAcgttgagtttaaagccc gaagggctagagtagaatctctaacctttcccaggcacgaaacagtgaag ccacttatttcccatccataacgggccgcaatcatgacgacggattatAT CTAGCAGTCCTTTGTTTTTAAGTAcggcattttttgaaatctagcgatgg attttactttcaatccggcgtttgtctAAAagccacgcgcgggcgttctg gatgggagaTGAAGTAGCTTCATTTCTCATCCAAAAGTTTCTACTCTAGC CCCTTCGGTGCTTTAAACTCAACGGGTATCAAGTATGTTTCTCAATCATT TGGCAAAACCTGGCTAGTGGTTGAACCCACGATCTTGTATGCTGCATCCC TGAAATAGTGATGATAATCATCAGAATCGTAAAGCGTTTTCGCTCATTAA GTTTTATAAGTTCGTATTAAACGTGTTAAAAATAGATGGAATAGGGTAAC CCAGTAGTCTAGGACTCAGCAAACTGACTCGGGTAGCTATGAACTGAAAG GGACATTAGGAggagccgggtcataccaaagattcccaaaatggtacttg atgcctctctgcttgatgctcagcaaccaTTTGtcaagtggagaaatcca gggaaaggagtggcaccctcccctaccttcgggtagacagctagagaaaa gggagccttcggatCGCCTCTGACTGTGGTCGCCGACTTACTTACTACTA CTATTCTTTTATCAGGAGCTGAACCCGAAATTCTGTATTCACAGCGGTGG TGAAGTCGATCGTTTGCCAACAGCCAGTACGTGCATGAACTTACTCAAAC TTCCCATCTATAACTCAATCGGACTTTTACGAAAACGCTTAATATATGCT ATCGAAGCGGAAGCTGGTTTTGAACTTAGTTGATGTCTTACGTTGAATAT TAAATAGAGTTCAAGTGTGGTTTGAGAGGATTAACGCAACTGAACCGGCA AAAGGAGTCTAAAATGATGCACGAACTTACTCGATCAAGCCTGAAGCTac tcaaattataaaaatctcGTTGAACTTTAACGAGAGAGACGTTGATATGA TAACGCTTAACGCTTATCGTAACAAAAGTTGGATTTAAGTCAATAAAAAG CCTGGGAATGAGCTAAAGGAAACCCAATCAAAGTCGTTCAGTTGCACTAA TTATACGCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061381TCONS_00061381Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061381-proteinTCONS_00061381-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:146928..156537 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.22 4.75 3.61 4.22 15.89 9.94 13.52 14.97 9.69 11.45 12.27 7.63 7.95 7.72 8.43 9.68 11.3 12.72 6.52 9.24 8.7 10.59 8.49 10.96 17.88 16 5.55 5.75 7.13 7.13