XLOC_038528 (gene) - C. hemisphaerica

Overview
NameXLOC_038528
Unique NameXLOC_038528
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:660592..668754+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038528 ID=XLOC_038528|Name=XLOC_038528|organism=Clytia hemisphaerica|type=gene|length=8163bp|location=Sequence derived from alignment at scaffold_358:660592..668754+ (Clytia hemisphaerica)
ATTTTCCTGAAAGTTCTTTATAAATATTATCTAGCTCTGCGTTCTAACTT GTATAAAGTCAACTATTAGGTCATAATTGCGTGGGATTTccttctttttt gatttttgacgtGTGGCAGTCTTGCAGTCTTGTTGGCAAGGGCATCATCA ACCCATCAAGCCACTTGTCTACAAAGGTTTATCTTGTAACTGTTTATATC AAACATCACAATTTTCAAATTGTTCTATTATGCTTGCATTATCTACAATA CTCTTTAACAAGATCACAAGGCCAGTGGTTTCGGCAATTTCATCATCACA AAATCTTTCAGCTTCAACAAGTGACAAAATGAACCTTGATGAAGATCTTT CAATCGTTATGTTTGTTCTTGGTGGACCAGGTGCTGGAAAAGGGACACAG TGTACTAATTTAGTCAAGGTATAACTTGAtccttttttcatattttggca GTCACTTGTATCATGCAATAATAAAGTCAAGCTGGCTATCCTGAAAAAAT AGATTAAAAAAATCCCGGACAGTCAGGAGAAAATTAGATAGTGCAGGAAA AGGACCATTCCAAAAAAATTCTCCATGTTTTGCACAAactaacttgcatc agtggaggctaacatgcatggccctaaccctaacccatAGCCCTATATTC tgcaaagttaaatcaaaacaaaaatagtagagtagagctgttagtgcagc tgcgtagttgtattttaatgaccagacaggtcattcatttgagggctatg catgttagtctccactgatgcaagtttacctgatctcacggtatatattA AAGTTCATAGGttacaaaatttcaagattCGCAAAAATTTTTCGAGGAAA CGTGTTaagcgtgtattaaattttacAATTGTCAGTTTGTAAAAAGTTTG CGTGCATTATACAAATTTTGCAATTCACTAAattgggcattttcaaaaag tgggaataaagcaagaaaatgactgattttgCACAGGCGATATCATCTGC CagaccaggatgcaagtgaaatttttcaatctgtgGACCTAGACGGGGAT GGTTATTATCACTTATtatgttagggttagggttggagctccaGGACGAC TGTCTGTCGTGTCGGTTGAGCCTATCCgcaaaattaaagaattttacGGG GACTTCATTTCGCgtatggcactattgggtgccaatattttcacaatttt tttacttctactgtcaaatcatgcatgttggttgttgaaacacacattat ttgcgcttctttgatgcaagtgACCATTCAAAATGTAtttattttacata tttttagtattgtttagaaatatttcgcggatgaggctcttctaaatttc caatgggacttaatttcgcagatGACATCCAAATctgcgaaatccgcgaa atttaatcgcCGCAAAAGTtcatcccattaaagtaacttgcatcagtgga gggaaacttgcatagccatcaaatgactgaccaaccaaagcagcaaaatg tcaaaaaaaatgaacaaatgaaTCCAAGTGAGGTCAATTATTTGAGGGGA ATgaaagtttccctccactgatgcaagttacgcGACTTCACGGTACCACT TGGATTCCTAGACTATAGGTTTACAGTAGCTACGAATACTCATTTGTCTT CAAAATCGGTAAAAAGGAGTTTTTAGCTGTAcaaaaaattccatttatac TCAAGATCTGTCATAACAGAGTTATTAAtccgtaaaattttgaaattggc tATCAGCTTGTCATGAAATAACTACCATGTGATAATTATATgtaaatctt tttaattttatgcagTCTTGTTCTATGTTAGATAGCTCATATTTTATGac catttattgattttttgagaTCTGTGGGCTGAGTAGTTACTGCTGAACAA ATAGCTGCTGTGGCTGACATGGGTgtagtttcaattttttttaagtattt tttttttaatgaatttgaagagaattgaaaaagttttttgagaaaattat ttgaGCTGTTAAAATAGTATGGGAAATTAATACTGTAGCGGGGGATGGCA GATAGGGTAGGTGAATGGGGACTTTCTTTTTGTATGTCCTGTAAGGATGT ATGAGAAATGTCTTAAAATTAGTTGAAGTAGTAAAAATAGTTGAAATTTA TTGACAGTTTTCCTTCCTATATACCTTCTTTTTAGTTACTTGTTTCAAAT TGACCCCCTCCCTCCTAAAGGGAAGGTGTTCatacttttaaaaattcaat agCTCTTAGACAGTGATgtaaaactttaatttttatgtttttgtttgatt tctcaACAGAAATATTTTGTGGTCATTCACACTCCCATATCACTTATCAC CTTGTCATTGTGCTTGTACATTTGTCTatgttaagcaaaaaaaaaaagga tagAGGAGGAAAGAGAATACTTTACTTTGTCGTTGTAAAGTTAATAACAA CACAACCTAAGATTAAAGTTTTATTTCTGGGTGAAATATTCAATCCAAGT TATGCGCCAAAAATTTATAGGTACGACCAATTACCTATTTGGACTCTTTC CTaaagatttcatcaaaatttctaaatcttgaagataattttagtaaaaa tacaCTTCAATGCTTAGCTCTAATCATTGGTTTTTATATACAAGGCTGAT TaataatttataaatcttttaTTACACAGTGTTCCAATTGAAACATGCTG GCAttacaatttatttttattgaatcaACACTACTCCCATACACTGCAAA CATCACAGTTTAGTTTTATTATGTAATGAAACCAACATGTAAGGTCGTgt aataaaaacattcaaaaggcATCAAGTTTCTTTATTAAGCTTTATTCTGT GATCAGAGTTACCTTCATCGTTAAgctcattttgaaacattaattttttt atgaatgtttGACGTTCTatttcctgctaaaaatatttttattattatta ttatctatttttaaattacaaaaaagaacAACGAGGTTAAAGTCATGGGA GAAGTAAATCGAGAATAACCCCGAAATTAATGCAgcgtaaaagtacaaaa aatcgATTTTCGATAGagatttactggttcttatcaTAAAATGGTTTGTA CTGATGAGTGGATTGACTCTCAAGACCTGTGAATTttagacatttaaaaa aagtaaatgttTCACATTTGAGTGTGATTAACTGAAAAACTCTAGAATAC TTTATCGAATTTTATATAACTATAGTTGCATTTATTTGAACAACTGTGAA AACCTTCTAATCttctttcaatatttatttgGTGATTGCAAAAGTATTGA CATGAAATTCAATTAATGATTTTCGATGTTTATTCATGATCAAGACAGAA gcaacttttcatttttttctctaaagATACTCGATTTCTTTATACATATT TATaactctttctctaattcgaacctctattaagCGAGACTAGATTAATT TGTTGTTGTATTTCCACTATAATATATTTTaaacactagttatttgtacg aattaaatttgaatggatctgaaaattaattcaagaaattgaaaaattta gaaaatcaagcattccatacactgaAATTTTATTATTCTCTGGATGATGA ATGAATTAAGTCATCAAAGTTATTTATACtattcttttgataaaacaaag ggGGACGTTGCCTAGTTAAAGACTAGGTGAATGGGTGGAGGCTACTATCT TAGATCCCTGAGGACATCATGACGGTCGGAGTCTAAACCAGGGAAGATAT GATctctaactttttatttttggacctataaattaaccgttatTCACTTT CAGTGAAAGTCTCTTTCCACAGACAAACCTATAAAACTCGATTTTGTTCA TATACTTTCAtaggaaatatttttatctttcagGAATATGGTTTCGAACA TCTATCGGCAGGTGATTTACTACGAGCTGAACGTAACAGTGGTTCGAAAG ACGGTGAACTTATACAACATTATATCAAAGAAGGAAAGATCGTCCCTGTA GAAATCACCATCCGTCTACTAGAGAGGGTAAGAAAACAGTTATTACGACT CGGTTATCCCAACTTCCCGATtcgctaaaaatgaaaatggctTTTTGGAC AATCTTCAAATTTAATTCGCTGATTTTGTTTTAAGTTACTTCCCATTTTG TGactctaatacaataatgaccggttagtgagggctgtactgagaaatat tgcccgaggtaaagtaacgaccgagcttgcgaggttgttgcgttgaccga gggcaatattttcagtacagcccgaaaaaaacggtcattattgtatttgt taaccgtttccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttc cttcagcttcgattgatttttagcgctttatccaggaaaaatagcgaaat aaagcagaaaaaacaagcgaaaagagataaaaattgctataatttctgat gtcagaaataaaaaatgagagaaacgATGTCAacacattgttcattttcc tttgaaaaagtgacgtcacaatgaattttcctaacgacgggcaactctgg acaatgtaggcccgtcgtcatgcgaaaagaaccaattgcattgcgcaaaa aagtcgtgtagcccgcttcgaaaaagtaaccggttaacaattaAATATAT TACATTTTTATTTAGCATAGGTTTTTCCATGATTTACTTTGCAGCGTTAT AATATCCTTTCGATTTTCTTAATAATAGGCCATGAACGACagtccaaaat caaaatttctgatcgatggTTTTCCACGTAATAAAGACAATTTAGATGGC TGGAACAAATTAATGACCGGAAAAGTTAACGTTATGGGCGTTCTTTTTTT CAACTGCCCCGAAGATGTGAGTCCTTATTTTTGATGGGCCATCTAGGTAC CTAATTTTGTAAGGTTCCAAATACCTTGCTTTAGGTATTGATTTGCGGAT ACTTGGGTTTACATATAAGGCTTGTGCAAAATTAGAGTTCCtttaccatt tttctttttttttttgttgaaattttcgGGTGATTGATCTAAACTCATTT GCATAATTCTTGCACATAGTCCTTAAAAAGTCTGTACACATTGATCCGAG AATCTTCATTCTTATCTATTAATGATATTCAGGacataatgttttctacg gaaagaccccggtttttgccagtagtggcaaattttatacaagtttttgt ctagtttaaatttgccactactggctaaaaccggggtatttccgtagaaa acattacgttatgaatatcatgaattttgtCTTCTTTTCAATAAGGTGTG CGTCAAACGAATCATGAAACGAAGCGAAACGAGTGGACGCGCTGACGATA ACGAAGAAAGTTTACGCAAACGGTGAGTTGAATACCTTAatggaattaat ttttgcggggattaaatttcgcggttgagctcatccgcgaaattttaaga ttttgtggcgacttaattttgcggatggtactattgggtggcaatatttt caacattttattaCCTTTTACTGTtgaatcatgcatgttggttaaTAAAG TACGtgttattagcgcttctttgatgccagtaaatattcgaaaattattt tatttgacattttttgagtgttatttgaaaatattttgtggaTAAGGCCT TTCCGAATTTACATTGGGACTTAACTTTGCggacccaaatccgcgaaaac cgcgaaattcaATTCCTGCTAAATTATTATCCCTTTTAGCCATCaaaata tatagtttgttttttacTTGTCTCGATTTTTTCCACTGAAGATTGGTGCC TGAGcgccatgaaactctgagtttgaaacaaagatattgtgtcaactctt tattatgTGTGTTTTTATAAATAACGTGTACCATTTTCACTTCAGATTTC GAACATATTACAACGAAACGATGCCGATTATCGATTCATTCAAAGCCAAC GGGCTCGTCATGAACGTCGATGCCACACCCACACCTGATCAGGTCAGATA GATCAACTTTAATCATTGTATCGGTTGGATTTGTGATGATTTTATCTTCA TGAATACTGTAGAGTCTCTTTTACTCAAACTGGCACTAACAAGTTTTCTT GCCTTtagttaaaaatgccttaatTCATATCTTCataatttgtgttcccc gtgcgtgttcgagtcaTTGGAGGATCATCTGTATTATATTTATagaatta atttatttttgtgacCCTTTTAAAGATTATTATCTCCTAGTGAGATTTTG TATGGGATAGCCATTCTATACGGAACTTTGTTATTATAAtgatacttttt tcaaaaatactgttttaattttacttttatcttttttttaccaGGTCTTC GAAAGCGTCAAGAAACTTCTCGACAATAGGTAATGTCGTTAAACAGTTAT CTACCTACTGAACATTAAGTGAAAACACCTATTTGTTCGTTCTGTTAAAA TGTATTTGTTTTGTATATAATTTGTATAAGTTTCACAGTTGGATGTTTTT TTATGTTATGCTGGGCACTCATCGAGGGTGTTGAATTATCGTTACTTTGG CAACTTTTACGTACAAAGATGGTGCGGTTTTGTACATACCTTTAAAATTA GGAGGAAGACCAAATGAGATATTTGTTTTACGTTGAAATCAACATTGGTC TCTCATGGTAATTTAATTAGAGACATTTTTGGAATTATTTAAACAAATGA GATGGGAGTTACAGTTACGCAGGGTTATCGGTTAATGGCAATATGGTTGG CTATTTCTAGTCGCATCAAAGGCATAATTAGGGAATGTACTGTATCTAAA AGATAAATATAATAGGGAGTATTTCTTTTACTTGGTGAATTAAAGATCGT ATTTTTTtgctggaaaaaaaaaacagaaaaattctaACGGATTTTATCAT TAACTTTTCCATGGGAAAAATAATTAATATCTTCTTGGGGGAATTTCACA CCCATGTGTCAAAGACCCACTGGAAAGTTTGGCCAAAATGTTTCAATACC CTAcattttagccccactggaaaattgacttagACTTCATTCCCAgttaa aattcaaaagattttttgacctgaGAACAATTgaatttccatccccattg ggatttcgatagaaatttttatcctcactatgggaagaagttccaccggg gttTGGAGTTTGTTTTTTGAGTGATACAAGGGTGTCATGAAATTGGAAAG TGTGAAATTGGAACGATATTATATTTTTACAAACTTTatgaattttactt tttatgctTCCAAGAATCTATTGATAAGAGTTTGGGATATAATTGTCAAA CGTAAATTATAAGCATGTTATACTGAACTAGTAACTGAGAAGAAAAATCC TGAAACAAGTTTGCTTTTCTTTCTGTTACCTGTTATGATTTTAAAGTGAT ATTTAGCCAAAGTAAGTTTTGATCTCTTTAATGTAAAAAGGGTTTTGTGC CTTATTCTAGAGGTAGTCCATAGGGGATAGTGATAAGCTAATCCTCAAAA TGGGGAAGatttaacaaaatttaataTGGGTATATTATTGTCCTCATATA GAAACAGATTTTCGTTACAATGTAACTTTTAGGTGAATGCAAAATAATAG GGAGAGAATTGAAGTAAAAAACGAAGTGTTTGAAACTaacaaattttttc catttaaatTTCTTGTTCAAAATATCAACCTTCTGAATgtcctttttttc tatttttaagttTCCAATCTACTAACCGACGCTTTGGTAACTAACTGAAC CGAACGAACGAATGATAATCGGACGCTCGGAATGATAGATGTCCAATTTG TTATagtctatttattttttatcatatGTTTTCTGTTCTGTTGACCAGAA TGTGTGCTTTTTGTAatcaatcattttttaattcgtttttaatgcatttt agaAAAACTAATAATAACAGAAGAGGAATGAAGGAATGCATCTGTCATCG TCGTTCGACGAATGTTTCAAGAAAATATTGTCGTTaaaggtttttgaaaa ttttaaaagaaccattcctatttcattgaaaagaagaaagatagactggA ATTtggatgggtc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061411TCONS_00061411Clytia hemisphaericatranscript
TCONS_00061412TCONS_00061412Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061412-proteinTCONS_00061412-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:660592..668754 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CMPK1UMP-CMP kinase isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
66.49 63.61 36.58 37.49 37.93 28.61 92.08 95.27 79.93 71.13 78.95 106.16 65.44 67.41 55.27 58.02 73.03 73.33 55.67 62.94 64.19 68.15 98.74 94.18 115.45 109.46 83.17 98.23 54.08 57.09