XLOC_038532 (gene) - C. hemisphaerica

Overview
NameXLOC_038532
Unique NameXLOC_038532
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:887061..894905+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038532 ID=XLOC_038532|Name=XLOC_038532|organism=Clytia hemisphaerica|type=gene|length=7845bp|location=Sequence derived from alignment at scaffold_358:887061..894905+ (Clytia hemisphaerica)
TATTAATGACTGATGCAATAAGAGACATGACATACATGAACAACACTTTG ATACCAAAACAAAATAAACTCGATGTTGAACGAATAcaaatattcttttt aaaatcttGTTATTACTACTGACATAAGACTTTTCTTTACATGTACGATT GGTGATCAGAGGGTCtgagaaacaaacaaaacataaagaaactttcaaat ttgaACGAAAAACCGAGATTTCTTTTGAAGTACATGTTATTGCTGGTTTA TAGAAACTCTAAGTTACATTAGCTATAAAggttgaaacaaaaaaatggat TCCGCACATTGTGATGATCGCAATTTGGCACACAGTGCTACTGGTAGAAA TGTCACCAACAAAGTTGACAGCGTCGTTGAGACAGCGAAACTTAAAGAAG ACCATGACAAGCAGATTCAAAAATTGACATTGGAAAACAAGATTAAGttt cttgaatctgaaaataaCCATCGAATGAAAATCATGCAGCTTGAAAAGGA CAATCAATCGTTAACTCATGAGCTGGAACTCTTGAAGTTGAAGACCTCGC ATGAACAAGAGGCTAAGAAAGTCGTCGTTGATCgtgaaatggagaaaaaa atgctGAAACAGCAAAATGAATTCCAAAACAAACTTACTGAAAAAGACAA GGAGCTAGCTGGAAAAGACAAGGAACTAGCTGAAAAAGACAAGGATATGG CGGCAAAAGAAAATGAGTTTAAATTGAAATTGGCTGAAGTGGAGAACGCG AATAAGCTGAAAATTGCAGAACATGAAAACGTAAACAAATTGAaacttct tgaaaaagaaaaagaaatggcAGACAAAGTGAACgagttgaatttgaaaa tcaaagtgTGGGAAACTCTCCATAATAAGACTGAAGTGAATGACGTAGCT TCAGGCGTGAACATCATTCAGAAGAAGCAAGATGGAGCCCAAGCAAGGAA TATTACCAGGGCTGATAAGTTGGCTTGGGGAGCTGATAAGTTCTTTGAAA GTAAACCAATCAAGCTCAATTTGTTTGCATCGTATCAAGATTGGTATGAA GAAATCAGTTCGTTGCTACATAGAGAGAAAGAGATTGTTTGGAGTAGTGC ATCGAAATATGTGTTCGTGAAAAGAGACTGTGGAGAATATTTCGAGAATT TACGGATGATCACACACAGAAAGGGACGAGCGAGACAGAATCATTCTGAT ATCTTTTACATTGAAGATGATGaaaaacaattttggaaaaaaacgaCATT TATGTTACTCCACCCATTACAGCAtaataaaagtttgaaaatggtTGAAT GGTCGACAGGAAAAGACCATGAACAATGGAAAGTCTCCAATGTTTCAAAC GACTTTTATCATGGTAGGGAaaagtctgccattttgtttggaATTTTTGA TAGAAACGAGGATTAATTTCACAAAAAGTCCTCAAGAAGGATTTCTATTG TGAATTTTGACAACATAATAACATAGTCATGAAAAGATATTAATATTGAT tactttaattttcgcgcatctTGTAATTTCTGATACATTTTTTCAGTGTT TTCGCAGGAAAATATACATAAATATAAAGAAGACAAAATAGGCGTGGAAT CAAAAGTCCCAGAGGTATATTTAACATAATTAGAGGGCTCTTATTAGTTT CTTTAAAAGAGcgcaaatatgttattcttGCAGATTTAAAGCTTAACCTT TAATTTTCGTGCAGGATAACGcgcttatctgatattccgatggcggattg gcggccgttcaccttaaagctctaaaggagagggccaatttcccatcgga gatgATTGATAGTCGGCCTTTAATGTCccgcatccccagtcgggttcaac tacgTTTGAGCGTAAACCAAATATTTCGATTAGACCCGTCAATCCACGAA ATTGAGGACTTGGTTACCAGGCCTGCCACTGAAAAATCATTGACACGGTC ttgcgaaattccgtaatctaaaccttccagatgttgaaacttttcccgac cttcagtaGGGACCgcgaaagacgggggtaaaatggttggaatcgaccaa aatgttgtttttaggttttagacCACCTATAACCNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaatattcaaaatc tgatgattccagcggaaagagcatgaaatgctgataaaaattgaggtata aaacatgccttgaaaatcttcctatcaaaagttatggacgttgaaagttt tttggtgacgtcatcataagcctttNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAAATCAACGCAGCG TTCTCCCTTCAGGAGCACAGTGTACaaccaactaatttttttggatgttt taagccttcctatgTTGTTTAGACTTAAGCATCNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNatgtataaaacactaaatttggtcaactagtt ccgttattacgggattttaggttttgcctggaaaggcttatgatgacgtc atcacaaaactttaaacctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNGGAAGATtttgaaggcatgttttatacctc gattttcatcagcatttcatgctctttccgctgataccatcagattttaa atattttcaaaaaaataaatttttgctgagccacctgatgacgtcatctg gcaggtggccaggtggcaaaatttggtgtcactgtttaaaattaagtttt agaccctctaaggttcatctgtgccaaatttcatgctttaatcaccatct gaagtatttttgtgctaacagacctcactaaaGGAATCGctaaattcaat ccgtcgtcaaaaatacggcgcatattttaaggcttcacttttttcttgcc tgagaaaggtcaaagattcgattctagcaGTTCGGaattatacttcattg gttttttcttttctattttctggatacccaggctgtTATAAACAAAGCGG GTCGATTATacagatttcaaaaatataatattaagGTGATATTGCTGCGT TTGTAGAAAACCCAAAAGTGGATTTATAAACATCATTCTAAAATTTGGAA CGACATCAAGAAAAAGCTCTAATCTCAATTATCGAAAACCAGCCATTTCG AAATTCTAATGGAAATATGATACAACAAATAACATTTTAAATAAACACGA ACAAAATAAAATGCGAGAAGAGGCGCAcaagaaaaaataactttctTCGT TTTCAATAGGAGgacatttaaaggttttatttttacataagttttcccgt ttcatatcagtcacatatttcatatcaggacagtgtctgcctattgtttt TATTATGCTGATAGaagcaaaaaatgattttcttttccttttttttgacc aatcttgctccacatccgtgtcaatccaatgtgaaaaagcttgtaagtta aaattgatgagtaagcaaacgatatcacgcttattaaaaatcaaaacctt tAACAGCGTCGCGATAGCTTTTCGTGAACTAGAAAGAATAAAAAGGGAGA GAAAAAGATGGCTAGAAATCTTGCCCATAATACCAACGGAACAGACTGGT ACACGGAATTTAACTGTAAAAGGACAATCAATCGTTGACTCATGAGCTGG AGCTCTTGAAATTGAAGACCTCACATGAACAAGAGGCTAAGAAAGTTGTG GTTGATCGTGAAATGGAGAGAGAAATGCTGAAACAACAAAATGAATTCCA CTTTGCTAGCGTAGCCGGTCAGAGCATCTTACTAGTATACATAATAATAT ATAGAGAAATACCATTCCCTTGAGAacgaaacatgtcgggaaaaatcaaa atataatagccgcattctttttcaccgtccatcataataattttataaat atgaatatttttctagACTTTGCACATATAtactatataatattttcagc cgaagagccaaatgtaaattttggagattgaaatataccattattattat tgttattattattaaaacaaACTAACTGAAAAAGACAAGGAAATGGCGGC AAAAGACAAAGAACTAGCTGGATGGAACGTTTTTCTCTcacaaaaacaaa ctatataacaagaacataaggcttagaTGGCCAAAacgttaaaaacaagt taagaactttGGAGACTTTAAAACCCCCGATTTCTtcagaaaatggacaa aaagactcagaaaacggtgaaaataagaacatgttgagaacctctttagg ctttaaaactcaaaaagataagAACAACCAAAGGCTTTAAAGATATtgga agttcttataaaaaacatgtagaaaATCTCTCCACACTCAtaatttgcca ttttttaatatttcgttctaactgagaaaaatacaaaagcTAGCCTGTCT ATGGTCAAATTCACTTGGATCGTCTGTATATTAAATTTAACGAGGCAACG ATTGCGCTTGCGCACCACAATAATAACTCACAGCTAAGAACAAGCCAACC CTGGGTTCACAGTGGTCTAGGAGCATTATTGTTATTAGTGCCGGCATGTA ACGAAAGAAAGAGAGTAAAaagtctctctctctctcaattCTTGTAAGAA CCCCTTGCATTCCTCTTAAAGACATGACACACATGAACAACATTTAGAGA GAATTTGATACCAGaacaaaacaagacgacttgaagtcgaaaatttcgcc taaagtttaaactgcatgggaaaaacaagaagtagggATGGAAGTCAATC TGAAATCTACATAGTTCACATTGACGAAACATTTTTACAAGAAAagcgag gctcaaaatcgctaaaaaataagaccaatttaagaacaatggttgtttaa ttcttaagaactaataaccgaaGGGCCATACcatgcctatcgtaatactt tcgctaggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaattcagaaaagag acgcaacttcaccccttcgattctttttatttggagcttgattttttgta tatgggtctgttttcaacgactagtttactagtctatcgctaggcgaaat taataaactCGATGTTGAACAAATAtaaatattctttttaaaatcttGTT ATTACACTGATATAACACTTTTCTTTGTAGGTACGATTATCAAGTACTAT CAAAGGatttgataaacaaacaaaacataaagaaaatttcaagtttgaGC GAAAAACCGAGATTTCTTTCGAAGTACATGTTATTGCTGGTTATATAGAA ACTATAGAAACTCTAAGTTACATTAGCTAAGGTTGAAACGAAAAAATGGA TTCTGCAAACTTTGACGATCGCAATTTGGCACACAGTGCTGCTGGCAGGA ATGTCACCAACAAAGTTGCCAACAGCGTCGTTGAAATCGCGAAACTTAAA GAAGACCATGACAAGCAGATTCAAAAATTGACATTTGAAAACAAGATCAA ATTTCTTGAATCTGAGAATAACCACCAAATGAAAATCATGCAGCTCGAAA AGAACAATCAATCGTTGACTCATGAGCTGGAGCTCTTGAAGTTGAAGACC TCGCATGAACAAGAGGCTAAGAAAGACGTGGTCGACCGTGAAATGGAGAG AGAAATGCTGAAacagcaaaatgaatttcaaaacaaacttactGAAAAAG ACAAAGAACTAGCTGGGAAAGACAAGGAAATGATTGTCAAGGAAAGcgag ttcaaactgaaaatgaaagaattggAGATTGTCCATGCAAACCAACTGAC TGCAAAACAAAACGAATGTGAGCTGAAATTGATTCAAAAAGTTCAGGAAA TGATTGCCAAAGAAAGTGAGTTTAAATTGAAATTGGCTGAAGTGGAGAAT GCGAATAAGCTGAAAATTGCAGAACATGAAAACGTAAACAAATTGAaact tcttgaaaaagaaaaaggaatggCAGACAAAGTGAACgagttgaatttga aaatcaaagagTTGGAAACTCTacacaataaaacaaaaatggaaGACGTG GCTTCAGGTGTGAACATCATCCAGAAGAAGCAAGATGGAGCCGAAGCAAG AGATATTACCAGGACTGAGAAGTTGACTTGGGGAGCTGATAAGTTCTTTG AAAGTAAACCAGGCGAGCTCAATTTGTTTGCATCGTATCAAGATTGGTAT GAAGAAATCAGTTCGTTGCTACACGATGGAGAGGAAGAGATTGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061420TCONS_00061420Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061420-proteinTCONS_00061420-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:887061..894905 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32 0.76 0.24 0.41 1.05 0.87 1.3 1.7 2.12 1.79 1.92 1.87 5.1 4.57 4.45 4.02 3.18 3.3 8.43 8.73 3.18 2.36 2.6 3.72 3 2.96 5.56 5.41 2.63 2.52