XLOC_038661 (gene) - C. hemisphaerica

Overview
NameXLOC_038661
Unique NameXLOC_038661
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_36:170381..176716-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038661 ID=XLOC_038661|Name=XLOC_038661|organism=Clytia hemisphaerica|type=gene|length=6336bp|location=Sequence derived from alignment at scaffold_36:170381..176716- (Clytia hemisphaerica)
AAATTTTTTCTTCAATCAAGGCATGAAAGATATTTTAACAAACTTGGAAA ATTATTGAGATATTTAACTCCTGAACGGTCGTTAATAAGACGTACCCAGT AAAAGGGTATCAAAAATGAGGAATTCAGTGAAAAAATTGCCAAATTTGGC ATTTTTGGGGGTGGTATACATGCTGAATGTTGCATTTTGTCTGAAGAAAT TTATTATTATAATTATTTAGAAGAAAATTTGCCACTTTATATAAACCTTT TCTCTTTTAGATTTTTAGCAACCTAATTTTAGAACATGGTTTATCATAAT GGCCATAGGCTTTTTCTTCAAGCTTTTGTTTCAAAAAGACTAATCAAGGA AAAAGAAGCAAAAGATTTGTACATGAAAGTATGCAATATTTGTGAAGGTA TGAATTTAGTTATTTTTAATAAAGATACAAACTTTGATGGATTTTCATAT TTAAAACTGTCTTCCAAAAAATCAATATTCAGATATTGTAGTCCACAAAA CATTTTGAACATAATTTCTTGAATAACAAAATACCACTTTAAATATTTAC TACACACATTGCAAAATAATAATTTGGTAGTAAAAAAGGTATTGAATTGC ACAAAGTGTCCTTGTGAAATCCTATCATTTTGCAGATGAGCTCAACTGTA AATTTCAATCTGTTAAAATCCTACGAACTAAGTACTTTCTTGATGGATGA TTTTAATCTGTAGGGTGAAAGCTACATTTTAATCTTCAACAAAAGACATC TATCTTTCAGCTGATGGAAATCCTGATGAGTTTCTTGACTTTATCAGTTT GATAAATAAACAACTAGAATCGCTTTTCATGGAAATAAGAAGAGGATGTG CTGAAGATACTGGTCACGTCTATTTTAGCTTGGTATGTTTCATCTGCATG TTTTTTCATTGATATATAGTCAGACTTACAAAGGTCAATTTGTTCCCTGG ACATGCACTGTGCCCCAAAGTTCATCTGTATAGATTTTAATTTAAATAAC CAGGATTACTGAAGCTGAACAAAAATAAAAAATTTGACCCATAGGGATTC CAGGACACAGCATTATCACTTGGATACTTCACAGTGGGCAGGTCTGTGTG GGTGGGTCTGAAAGAGTTAAAGGACATCATTTATCTCCTTTCATTTGCTT AACACAGAATTTTTAAATGAAAGAAAATAACTATTTTCACCTCTCCTGGA CGGGGCTCGTAGTCTTGAGAAATTATTTTCTTAGTTTTGATTTGTCAGTA TAAGGGACACACTGCACTTTCCATATCATCTTTATTACCAAAAAATCAAA ACACATTCTCTTCTTTTATTACCAAAATATTTTCTTTTAATTTTTCCATA CTCCTTAGGTTAACAAAGCAGAGGATGAACATTCAAAGTTAGCCACAGAA TATCAAGCTCATGAAATTGAACTTATCAAATTGGCTGTAAGTTTACATCA TAATGATTCAAATAATGTCAATTGGCTGGGAAAGATATCCAGGTCAAACA AACCGTTTGTCATTAAGTTTGTGTAATATGAAAAATCAAAATATAATAGC CGCATTCTTTTTCACCGTTCAACATAAGCTTGTGTAATATGTAATAGCTA TGGGACAGTTTATTTTGATATTGTACAAGCAAATGTCTGATAACTGGTTT ATCGGTAACCCAAAAAATGCACTTTTCGTGTTGGAATAAAGCGCAGGGCA CTGTTGTAGCAAAGTGATGTTAGATTGCTGCTACTGCTACAATGCAACAA CATCATCGTCAATTTATATTTTGTACATGTAAAATACAAGATATATTGTA CTGTTTTTTAACCAATCAGATTGCAGATATTTTTTGGATCGACAATAAAA GTGTGATATCGAGAAATAAAGAATTAATTTACAATTGCTACACAGTGTTT AGACATGGCGCAATCTTGCAATGATTTTCTTTCGATAAAGAAATTTCTCA ATATTTCATTTGAATTTTCTTGAGCATTTTGTGATTATATTTATTTATAT ATGTAATATTTTTCCAGCTGAATTTGATTATTGAATCGCAAAATGGTTCA GTATCTTCTTTGGATCTCGTCAATCTTGGAATGGATCTTACAAAAAGGAT TCCAGCTCAAGCCTCTGAAGTAAGTCTTTCAAAGCATGTGTATGTGCAAA GAATTACAGTTCTGGGTTAAGTTGATTTAATCCCTTTCAATTTGCAATAA TACAATACAAAAGATTGTCTTACAACTATTTATCACTATCTTCCATTTGT CAAAACACTCTGTTATTAGGTATTTCTGTTTGAACCAGTGTTTCCAAAAC ACCATAATTATTAATATGAAAACTTATTTTTGCGGGAACCTTTTCATTGA AAAATTTGAAAAGTCTCAAGGGAAATGAATGAAATGTGTCCAAAAAAGGG AAAACCACGAAAATTAATTCCCCCGAAATGCAATATTTTTTCAATTGCGA AAATTAGTTCCCGCTAAAATTATTTCCCTTCGGGTAGGTATTGTTTTGGG AGTATAGTGTTGTTCATATTTATGATTTTTCATAAACCTTTTTTCGACAT TTTTATTTTGAAATCTTCAGGAGCTGATCATGAAACTTGTTGAAGATGGT TGGTTGACAGAAGTATGTATATCACAGAAATTTCTTTTACTTTAGAAATT CTTCATTCCTGCGTAAATCTGAAATAATACACCTATAAACCTTCAGCTGC ACGGTTGGCTTTTAAGGGGTCTACTAATGACTCTATGAGGAAGATTTTGT TTTCAGTGAACGACTTTTTTGGGCTATTAAACAAAATCAAACCAAGCATA AGTTGCCAAAACTCTAGAGAAATTTTCCCTAGTCTTTACAGTTGAGTGCA AACTATTTTTAGCATTCGCATAACTAACTAAATCAACGTCAGCTTTAATG CAAGGGTATCTTACATTTTTCACAAGAGTATGTTTTCATCACATGTTTTT CCTATATACGTTGAGAAGAATTTTTCTTAATTGATTTGTTTTTTTTATTT ATTTGAATACTTGAAACTTTTGGTTTTTAGAAAGATGGTAAAGTATTCTT TGGCCCTCGAACAACAATTGAGCTTGGCCAATACTTAAGAAACAAATACA AAGAACAAATTGGTGAATGTCCTCTATGTCATGATTTTGTTGTTATGGTA TGTTTTTTTCTCTATTTTCTAGAAAAAATATCGGTTCATGGGAGATTAAA GATAAAACTGACCAGGGGTATTGAAAAAATTCATATAACTGCAATGTCCA TAGGGGGGATGTGTTAAATGTCTAGGGGGTCGAGTCCAGGGTTGAAACGT GCGTTCAGGGGCTGAAAATTTGAAATAGTCAGGGGTAGGTTATTGAAAAG ATAATCTTTTACTCATCCTTTAAATGGATTTTTTCTGAGAGAAACCATTC AGTTTTTCCTGCAGAAGTATAGATAAAATCCATTCGCTTCAAATTTTCAC TCTTTCTCGCTACCATGTGATTTTGATTAGAGTTATTCTCTTGAGAATGG TTTTCACATGGTGACAAAAAGTGAATGGAGTTTAAATTCAATTGTTTTTC ACATGTTAAGCTGAATATGTCTTCTAATCTTAAAAGGTTGTGTTATAGTT TCAGAAAATAAGTAGAGTTTACACATTAATATCTGGCCGTTATATAGCCA GAACCTGGAGTTGCTGTGTAAACTCTACCTAACTTTCTGTATTGCCTCTG TTGACGCTTAAATTAGGGCAAATGGCTTTGGAAAGCAAAGGTTTTTTGCC TCCTTGTGTTGAAGTTATCAAATATTAATCTGGGGTTTTTAAATCAGAGC TTATCATTGTATAAAGCTGAAGGTCTACAACCTTTCATAAGAAAGAACAA ATTAATGATGCCTTAAAGTTTGTGCCACATTTCGGATGAAGGAATGAATA TAGCACTTTCTTCTTTTGCGTTTCATATTTTTTGCTAATATTGTATGAAA AGTGGGTTGAGCAACTTCTAAAATGAGTCGTATCCTATCCTAAATGGGAG ACTGGACAATAGCTTTTGGCTATACCTAATTGGCTAATGAATACTCAATT GGGCTCTTCCAGAAAATTTTTATTCATGGAGGGTGGATTTTTGTCCAGGG AGTAGTGAAAAACTTTGAAATTTGCCTTATTTAGGGTTAATTATGAATGT CCAGGGGGTCAACTGATGCTTGTCCGGGGGTTAGATCTGTTGTCCAAGGG GTAAATTTCCAAAAACTGTTATATCCTCCAGCCTCCATATTCAATTTTCT TTCTGGAAGAGCCCATTCCTCAGTTAAATCTTACAAACTGTGTCATATAA GAAAACTTTATAATTGCACTTTATTGTTTTACAGGGTGATATATGTGAAG AGTGTGATGTAAAACTACACAAATATTGTGCTGCATTGAGCTTTCAAAAA TTGTAAGTTTAATAAACATTGAATGAAAACTATTTTAATTGGAAAAATTC CGTTTTGTTATTTTATTGTCTTTTAGAGAAAAAAATATAACAACAACATA TGCATGTACCAGGTGTGCCAGAAATAAGTTACCCTCTTTGACCTGATATT GTAGGCAGTAGAATATAGATTTTTCAAAGATTGTTTCGGAATCACTCAGC GGAAAGCCTACCTTAAAATTTGGTGTATTACTTTTCATTTTACTTCATTG GTTCAAAAGTTATGTTCAAAAACCTTAAATATCAATCTTAAAAAATGTCA ATGGCACACCCGGTAAGAAAAGCCACAGTAAATTCTCCCATACAAGGAAT GATAAGTTAAGGGAGACTTTCCTTTATGAACAATTATTTGACTTCTGTTA AGGAGACCCCCCAAGTCGTTTTCGTGATGATTTTTGCAGCATGATTACAT GATTTGGAAATTTTTTCTCTGTGATGTGATGAGAGGTTAAAACGTGATCA TGATTTGAAAAATTTTTGAGCCGTGATACACGATTTGGACTTTTTCAAAG GGATGTGTGATTGTCCATTTTTTTGCTAATTTGCGTGATTGTAATTGAAG ACAAAATATTTCGTGATATCGTGGCTGGAGGGGCTCTGTTAAGGTTATGA CTCTGAAAGATCTATATCAAGACCTATATTTCATGATAAGAATTATATCA TATTTTAATTTTGCAGGCCAGCTAACAAGAGGAAATGCCCCAAATGCAAA ACCGAGTGGACTCGAAATATCATCAAGCTGTCAAGACCCAGTAATAACAA TAATAGCATCAACTTAGGTATTGATAGAATTTTACAAAGTTTAGCATTCT TTTGACAGTTTTACATTAAGCCTTAAGTGTCAATTTTAGTGCCAATCGTT TCTGAAGACTTTCGATAAATTTTTTTTAATTCCTATGGCAACCAATGCCA CCATTTTATCAGTTGCCAAGTTAAAGGTTTTGTTTTTACATAAAGTGTTC CCGTTTCATATCAGACACATGTTTCATATCAGTGTCTCCCTATTGTTATA TTATGTTGATAAAGTTGTTGTTCTTTTCCTCTTTCTGACCAATCTTGCTC CACATCCGTGTCAATCCAATGTGGAAAAGCTTGTGTTGTGAATTAAAAAT TGACGACTAAGCAAACGATATCACTCTATTATCTAGAAACAAAACCTTTA ACTTCATAAATTTTGTATTACAGAGGAAACTGTGGTAAATCATCGTAATG TACCTACATCCAGTCAACAGCCCTCAACATCTAGTGGTAAAAAGCGTGCA AGAAGGTGAAAATTCTCCTCATAGACCTCAAGGGTCTTTTATATTACCTT CAACATGGCTTCTTCAAACTAAACAGGCAATCGAAAGATAATCTTGATAT ATTTGGAAGGATCTGATATGCTTGAAATGAGTTGTGAAGAATTGTACCTG ATTTTGAAATATTCAATACGGAATATTGTACTATTCATAACTCTTTATAA TGATCACACGTCGAAATTCTGATATACTGAGAAAAAAGTATGGAACTGAA ACTGCAAAAACGATTAGACGAAATAAGAACATTCAAATCTTTCTGGGAGT AAAATGAAAACAAAAATGTTGCATCGTCACCCTTGGATGTTTCGCATCAA TCTAAAGCATAACATATTTTTAATTGGGTCAATCATTCAGTCATTTGTGT AAAAATTGTACATTCTATTTAGTAGTATTTTATATTTCATCTTAGTTTTT TATGCTATTTTAATGGCGTACTATATTTCAAAACTAGGCTTAATTTGACT AATCTTGTCACATAGGCGACACAGTGTCAAGTGGACATGTTCAATGACCA ATTAGTGTTCAAAAATATTTTAATCCCATGTATGTTTGCCTTTCTGAAAA TATTTTGGTCAGTTTATGTTTTATCTGAAGCGGGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061650TCONS_00061650Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061650-proteinTCONS_00061650-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:170381..176716 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NSMCE1PREDICTED: non-structural maintenance of chromosomes element 1 homolog isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.31 34.02 40.95 40.65 27.35 18.7 24.79 22.79 21 14.42 15.1 13.21 8.06 10.84 14.77 15.57 26.34 26.2 7.18 8.72 23.54 23.68 46.67 41.99 8.86 13.66 12.3 10.69 23.52 29.99