XLOC_038687 (gene) - C. hemisphaerica

Overview
NameXLOC_038687
Unique NameXLOC_038687
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_36:1407110..1410624-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038687 ID=XLOC_038687|Name=XLOC_038687|organism=Clytia hemisphaerica|type=gene|length=3515bp|location=Sequence derived from alignment at scaffold_36:1407110..1410624- (Clytia hemisphaerica)
TTCCAAATGGTCAAATCATCTCTGGCTTTATTTCACCCCAACATTTCCAC
CGGGTAAAGTAAGCAAATTAATAACATGTCGTTATTAACCGAAGAATACT
TTTCCATCTATGTCATATTATTTCTATCTTCTCTTAGAACCCATTCGTAA
CCACACAACAGGTGGTCTTTTGTGTGAGCAAGAAAATCCCGATGACCCAT
GTCCAGATGAAATTGGACAAAAGATCGTACCAATTTACATGGCAATTTAC
ATGTTGATGACGAATATATTATTGTTGAATCTGCTCATTGCCATTTTCAA
GTAAGTTGTATGTTTGAAATATTCGCAAACAAAAGTTCCAATATGTATTA
TCATGAAAACTTTACAACACGACTTTGGGGTTTAGAACAATTTAATCTCG
AGAAATAACACGTTTATTATAAGAAAAATTTTTAGAATAAATTGTTTTTT
TTTATTCTAACTTTCTCCATTTTTCGAGTATCTCAGTCCATTTTTGTAAA
ATAATCAGGTGTTTTAGAGACAATAAATGTTCTCCTTAACGTGTTCTTAA
TATTTTGTTCATAGAAGCAATAAAATCTATTAAAGTTTGTTCTTATAAGA
GGAACCAGTACTCAACTGCTTGAGGACGCAATACAAAAAAACTTGTCATT
TATAAGACGTCTTATTCTTTTTAGCCGCAAGTCTAAAAAAGATATACAAT
ACTCAAATTTGTGTGCCCTCTTTAAACTTAATTTGAGGCCGATTTCGAGT
TTGGTTCTCTTACGCATTCCAGTTACTCGTGTGTCCATTTCATCAAACTC
TCTTCTTGAGATATTATGTCTTTCAATTATTGCTCCAATGATGAATCTTT
ACCAACAAACTCTATAGGCTGCTTGCATCCTCTAACGAAATGAACACTTA
CGGTTTTGTAGAGGTCTGCGATTCAGACTACAAACTCCACTTTTAATCAA
ATAGCTCGACATTTTACTCGATGTTTCTTTATTTCATATTTGCCTCATCG
GTGACTTTTCTTTTCTTTTCTTTTCTAGTAACACTTACGAAAAGGTGCAA
GAGAATTCGGATCGTTTGTGGAAGTTTAAACGTTATGATGTCATAAGTGA
ATACAATGACCGCCCATCATTTTGTCCGCCCTTCATTGTGTTGGCTCATA
TTTGGTTTTTCGGATTGTTCTTGTTCCGATGTTGTTGTAAAGGAACAAGA
CAAACCAAATTTGGAACGCTCAGTAAGCTGTTTTTTTACTTCTCCTTCTT
TTGTAATAAGTGCATTCTTATCAGTTAAATTAAAGACCTAAAGAATAAGG
TAGTAAATTTTTATCTTTATTGCTTTACAGACTAAATTTGGTAGTTTTTC
CAAGTTTTTGAGAAATTTACGTTCAATTTTTAATTTTATCCAGTTTAATC
CACTAATTTGAACTTTTTCTTTTTGTGGCTTTTTATTTCTATTTTGCATT
TTTGTGAAGACGTAGTAGTTTTTGCTGCCTTTTTAGGAGTTTTTTTTGCT
TAAATTCTACTTATTTTTTCACCGAACGACCGATCCTCTCTTTTCTCAAC
TTCATTTGAGCTACAATTTGACAATGTCTGTGTGTCTGTCTGTCTGTCAC
AAAAACTTTAGGGCAGCCTGGAGACTTCAAAAATGCTTGGATTTGGCTGA
AATTTGGCACACTTGTTACTTGGGTGAATATCTGGGGGCTATTTTTCATT
TTTCAAAAATTTTGATTTTTTGGGCCTGGGGACGAGTTATTCGCCAAAAA
GAGGCTATAACTTTGGCGCAGCCTGGAGACTTTGGCTGAAATTTGTCACA
CTTGTTCCTTGTGTGAATATCTGGGGGTGTTTTTTTTTTCATTTTTTGAA
AATTTTGATTTTTGCGGCCTGGGGATGAGTTTTTCGCCAAAACGAGGCCA
AAACTTTGGGGCAGTCTGGAGACTTCAAAAATTGTTTGATTTGGCTGAAG
TTTTGCACACTTGTTCCTTGGGTGAATATCTGGGGGTCTACAATCGGGCC
TATAGTTTGAAGGCACTAAAGTTGAGCCCAGTGTGTTGCGCACGTTTGAC
TATTGTATAGCTTGACCCGTAAAACAACAAATTAAATTGGCCTCGTCTTA
GATTGGCGAAGAAAATTCGGCTAACTAAGGGGGGATTTTTCGGGAACACG
CTTACAGGCATATTTTTACATTAGGAAGAAATTTTGGCGAAAAGTACTTA
TATATTTTGGTTTTTCGTTGAAATTCGCCTTCGCTTGAGTGTTCATTTCA
TCTAAAAATGCAATCGCCCCTCTTTGTAACAGCTGTGGTCATTCAAGAAA
ATGAAAACTGGAGGAGGGGGGGGCTCCCTTAATGAGGCCCCCCAAACGGA
CCCTCAATTCACGAAATCATGCAATTTTTTTTCGAAATTCACGCATTCAC
ACAATAACCCGATTTTTCAGAAATCGGAAAATTTTAATAATCGGTGGAAA
AAAGGAAAAATTCACATATTCACGCACAAGATAACCCAGATTCACGGTCA
CGCTTTCACGCAATCAAAAAGTGCATTTTCACGTTCACTCAAGTTTTTTC
AATTCACGCATTCACGCATTTTTTTTTCAATTTTCACGCATTCACGCAAC
CGATAATGCCCATTCACGCAATCACGCAAACCGCTGGGGGGCCCTCTTGA
TTTCTGCTGATCCTTCTGAATAATAACGAAATTCGTTGCCAAAAATTCCT
CTGAAATTTAATTGTTTTTTCGCATTTTAATCGAATTTCGCCACACGTTC
GAAAAAAGGTTTTGCCGAATTCAGATTTACCAAAACTGATTTTGTCAAAT
GGTATCGAAATAGGCGAGTTGGCTTATTTACCAATTTTTTGATTCTCTTT
GAGCATTTTCATTTTTTGAGAATAAATCCATTCGAAGCTTATGTAACTTT
AGAATAAGGTAATCTATTTAAAGGTGTTGTTTTTACATAAGTGTTCCCGT
TTCATATCAGTCACATATTTCATATCAGAACAGTGNAACCATAAAATAAT
TTTTCTTTCTCTCTGACTAATCTTTCTCCACATCCGTGTCAATTGAATGT
GAAAAAGCTTGTGAGTTAGATTTGATGAATAAGCAAACGATATCACCCTT
ATTTAAAAGTAAAACCTTTAAGTTAATCACTTCCCTTTTCTTTTCAGATA
AATCGTTTTACGTGGACGAGATCATTTTGTTACGTAAATGGGAGAAGAGC
AGGATGGAGGCTTACAATTATTTACACGAGAAACGTGAAGCAGATACGCA
AGACAAACGTGTCAAGTCTATTNCAGGGCTCGAAATAACGATATTTAGGT
GGTCGGACACACTGTCCGATCAAAAATTGATTTGGTTCGGACATGTCCTA
AGGCTTTTAAAGTAAAATGGGTCGGACATGTCCGATTGATTTTTATGTGG
GGTATACTTCATGTCTAATACAAGCTTCTGATAGAATTTTACATTGATCA
CGAAGAAGCTAAACAAATGTCAATTAATGGTCAGAAGCCCATGATTTTTA
CTTGAAGCATGCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061697TCONS_00061697Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061697-proteinTCONS_00061697-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1407110..1410624 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.53	3.03	2.44	2.02	18.72	14.12	11.44	14.22	10.05	10.72	9.16	10.82	4.86	4.15	1.96	2.71	2.03	3.52	3.82	4.12	5.37	4.83	4.05	5.08	6.54	7.77	3.56	3.7	1.41	2.13