XLOC_038769 (gene) - C. hemisphaerica

Overview
NameXLOC_038769
Unique NameXLOC_038769
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_360:31645..40049+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038769 ID=XLOC_038769|Name=XLOC_038769|organism=Clytia hemisphaerica|type=gene|length=8405bp|location=Sequence derived from alignment at scaffold_360:31645..40049+ (Clytia hemisphaerica)
AAACATAATTCATTGTGATATTAAGCCACAGAACATTTTCATCACTGGAA ATACAGATAAAACTTTAATTAAAGAGCGCCAGAAGGATTAAAAAACTTTA GATGTTCTCACAAGGAGGTTCCcattcattttgaaaaagtgacctGGGTT ATAAATTATTCAATAAACGCtcccttcttttaaacacccCGAAGTAATAT GGTATGTCCTATTAACAACTTAGATGACTCATACACCTCTAATTTTTATA CAAACATTGGTTTACTTTCACTTCGACTTAGATgataatacaccgtttag tagtCTCGACTACGCATGCGCATAGACAATTCCGACAGAGCGTTCCGGAA AATACACGCCGCGCGATTATCTCACAAATATTTTTTGGTTGGTAAAGTTT TCAAAACATCCTTGGAGTTATGGCTGTAAAAAGTGCTCTCCCTGTAACTT TAAGTGGAAAATATGGATTTAAATGAGAGAAACAAGTATAAATCTTTGAA AAGATCACGATCAAGGATTTGTGCAGTTATAAATAATTGTCCGAATGGAG ATTACAAGCTCTCAAAATGGGCTGAAGAAATCTGTCAACTTCATCAAATG AAACATCAAGATTGTGTTTGTGAGCCCCCATTTACGTGAGTATTACTTTG TCAAATCTTTTAAAGCAGAAAAGTATATAAATTGAGCAATATTTGAAAGC TTTTGCACATTTCTTCTTAATGCTCCTAAAGAAGAACcataaagcaaaat ttgaatttctctttttctctatATCAGTTTTTTCAGAGGTTATCAGTCAG AGCTTTAACAAGTAAGGTTCTTATACTTCTTTTATAGCTAAGTTTTTTAT TAACATCTACCTTATTAATTTCTTCAGCCTGATTCCATTTCCAACTTATA AGAAGGATCCAAGAGGCAGACACAACTGGAAAAAACTCATCAAACGTGTC AATGCTGACAAATCGGAATTGGAACCCGGACATCAAGCAAGAGTATGCTC AATTCATTTTGTAGATGGTAAAAAGACAGCTGAAAATCCAAACCCTGTAT TGAAATTGGGCTATCCAGACTACTTGATcccaaaagaatttttgaagaCT GGAAGACGTACCCTTTCTTACAAATCCAACCGAACTAAGAACCACCTCCA TCAAGAGAAAAGGATTCAACAAATAATGATCTTCCCTCTTCTGTTTCGTC AAATGATACAACAATCTACCACAATCAGTTTATGGAAATTGAGTCTGATT TAGAAATAGATGATGTCACAATGGAAGTGGAATTTGAATCTCAGCCAAca gaattgttttgaaaaaatctacttgagccatcttttacctatgatggtac cctactttcatgcaaaaaatcagaaaaagttaatgatccaatttttcaca agtccaaaaaaaccgttcCCTAAATGTTTACTCCCTTTTCTTTAGGTTGG CAGTTCGTAAACACTGTGCTTGATAGTGGAACattcagtggtttcatttc caaAGTGACCTACAACTACGAGCTTGCATCCTCTCCACGTCCGTTTATGT TGCTTCAAACGTTCATCAAGTGGTTTTTTGGATGGGCTTCTGCAATGAAC ATTGATTTTCGTATGGGTTGTAAAGGCTGCGGTGAGAATCCCAAGGTAAA GATCCAAAACTATCTGTTTTTTGTAGTTTAGATACGCTGCACAAATAACA TGACCAAAAGTGTTGCCTTCAATATTGATGTGGAAATTTACTGTAACCAA CTTCTGATTCACAATTTCTTTATTGCTTAGGTATTGGCATGTGACGGAAC CAAAATTGGTACTAACTTCAAAAACGTGTTTGTCACTCCAATTGAGAAGC CAAGTTATGACCATCCCACGGAGACTCTTGGTTCTATGGATCACTGCCCG TTGAAAAATCAGTTAGCAAGAACAGCATTTGCAGAATTAGTTGATCAGGA TACGACTGAGCACTTTGAGGCCATCCCTGGCGAGTTAAAACCTTTTGCTT CTCAAAGAAATGAAACAGATGTTGACCATCTTAAAAAGGCTTACTCTAAT GTTTACAAACAACTGTCAAGAACATCTTCCGTCGACacaaaaattcataa agaatcaaagagccaatctcgagaaaagctaatacctaagtaagtgataa tgtgcttataaataaatatcgaatttggccagtttttttaaaaaaaaccg tcaagcaaccaaaatttcatgtctaaacaaacaaattcttcaaaagtaag ccctcatgagcaaagaaaacatctatctcataaaaaaaattgagtaattt aactaagaacattgatgtatgcttattaatagttattcttatagataaac atgcattttttgagccagaaaattttttttggaaaaatctgcttgagcca tcttttacctatgatggtaccctttcatgcaaaaaatcagaaaaagttaa tgatccaatttttcacaagtccaaaaaaaccgttcCCTAAATATTTACTC CCTTTTCTTTAGGTTGGCAGTTCGTAAACACTGTACTTGATAGTGGAACa ttcagtggtttcatttccaaAATGACCTACAACTACGAGCTTGAATCCTC TCCACGTCCGTTCATGTTGCTTCAAACGTTCATCAAGTGGTTTTTTGGAT GGGCTTCTGCAATGAACATTGATTTTCGGATGGGTTGTAAAGGCTGCGGT GAGAATCCCAAGGTAAAGATCCAAAACTATCTGTTTTTTGTAGTTTAGAT ACGCTGCACAAATAATATGACCAAAAGTGTTGCCTTCAATATTGATGTGG AAATTTACTGTAACCTAACTTCTGATTCACAATTTCTTTATTGCTTAGGT ATTGGCATGTGACGGAACCAAAATTGGTACTAACTTCAAAAACGTGTTTG TCACTCCGATTGAGAAGCCAAGTTATGACCATCCCACGGAGACTCTTGGT TCTATGGATCACTGCCCGTTGAAAAATCAGTTAGCAAGAACAGCATTTGC AGAATTAGTTGATCAGGATACGACTGAGCACTTTGAGGCCATCCCTGGCG AGTTAAAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGACCATCTT AAAAAGGCTTACTCTAATGTTTACAAACAACTGTCAAGAACATCTTCCGT CGAcacaaaaaatcataaagaatcaaagagccaatctcgagaaaagctaa tacctaagtaagtgataatgtgcttataaataaatatcgaatttagccag tttttctataaaaacacgtcaagcaaccaaaatttcatgtctaaacaaac acattcttcaaaagtaagccctcatgagcaaagaaaacatctatctcata aaataattgagtaatttaaccaagaacattgatgtatgcatATTAATAgt tattcttatagataaacatgcgttttttgagccaaaaaattctttttgga aaaatctgcttgagccatcttttacctatgatggtaccctattttcatgc aaaaaatcagaaaaagttaatgatccaatttttcacaagtacaaaaaacc gttttttagccgttttttggcccaaatttgcccaaaatcgggctccgtca catttgaaggtttatagttacacatctttgtgcaaagaatcaatcacgag gaaagctaataacgaacgaacggacgaacgaacggacaaaggttaattta taggacctccaccccaccggggcaGGTCCAAAAAGATTATGACGATGCCA ATGAAGAACAGTATGACTTTTTAATAGCATTTACCGGTATATAATAGATT CTTGATTGCCGGAACCATAGAGAACATAGAAACATAGAAATAAAGGAAAA TAGTAACTTATCATTACTAGAGCCGTTTACTGTTTCTGTGCTTTTATTAG AAGTGATTCCAGTCTTTTTATGATCACGACTTGCAGACTTCGTACGGgat tttttttcgttctttgaATGTGCTAGTAATGGATTTCGGTATTTTTGGTA CACAAagatgaattagaaaaaagaaaactcaCAATATATGGAAACAAAAA ATGACATGCAGGAACGGTTGAAAGAATCGGCTACTCTGAATACTCGTAGA GAAAGGTCAGCAGTATCAACTCAAGATGATTTTTTCAACTAATATAATTG AGTTTCATCACAAAATTCGAGGCCTTTAAAAAGGGGAAAATTGAAATGGG TTAGCCActtggttgaaaaattaaaatttatttctGAAACATATTTACTT GATTCACATATAGTTAAAACATTGGaattttatgatttcaaaagttttcc ttcAGAAAACCAGCCCATTTTATAGCCTTCTAAACTTGAGGCATTTTTGC TACATTTTGTCACGGACGAAATCAAAAAGGTCAACAAATTAATCAATACA ATGTCTGGTAAAGAATTTGCAGAGAAGTTGAAGAATGGATTAGTTGGACC ACGTATCAGAACCCACAATTATAAAACATTTATCTCCAATATTCTGAGCT AAAGCATGTGAAAAAGACACTGGGTAAAAATTTTGAGCATGTTTCCTCTA ACACAATACAACTATGTTTGAACAGGTAGGAGAAGTAGAAACTGCAGGTG GCTTCCCTTCTTTGTTCTAACTAAAAGTTCTTCGTAAACATAGTTAACAG AGAATATTATATTCATCTTAGCAATTACCAATTACAAGAGAAATGCCATC GAATCGAGGACAGTATAACTTGTATGACGTGCCATATGtcgttttattat tttcagggaGGGTGTTTCAACATCAATATTTCTCGACATCTCAAAGTCAT ATTTTTGCGAAGTCTCAACGTCATTTTTCTCCATATTCCAAAGTCAACTT TTCTCGACATCTCAAAGTCATATTTTGAAGAATGGATTAGTTGGACCACG TATCAGAACCCACaataataacaTTTATCTCCAATATTCTGAGATAAAGC ATATGGAAAAGACACTGGATAAAAATGTTGAGTGTGTTCCCTCTAACACA ATACAACTAATAATCTAAAGCTCTTCATATGGAGTAGTTAGAATGTTGAA TGATATGTAACAGTTTGCAGTTGCGTTTCCATTTCAGGAATCCTCTTCGA CCTCGGGATCTTAAAGAAGCCGGAAATAGTGGAAGTGCAACGAAACGACT TGATTTCGGACCACATTGGTGACACTGAAACAGAtactgaaaaattaatt aaatcaaGCTTCGGAAAAATCCTTTTTGTTGACGAAGCATACAATCTATC GTCAGAGAACAAATGCTCAAAAGATTACGGAAAGAGAGCTTTGGATTTTG ATCATGAGATATCTTTTACCACCACCACCCAATTCCAAATTCCAATAGAT CCCGTGATAATTTTCTGTGGCTATCAGTCAGATATGAAATCCTTGCTGAA AGTCAACAGCGGGTACTTAAGAAGAATAAAGCAAAGATTTCATTTGGATG ATTATACCCCAGAAGACCTCTGGTGTATTCTGGAGGGTAAGCTTTAAGCT ATTGATGTGAGGTGTCCATATGGACTTGGGCCCCTCGTTATTAAGTGCTT TAAAAGCTTGCCAAAGGaatacattttgttaaacaatgCATCACTTGCCG ATGATATGTTGCATGATATCACCACTGCACAAGAAGAGAGGCTTTTGGTG CCACAAAATCTGAACTAACAAAATTGGCTGTCGATAATTTTACTTTGGGC ATTAACACTTTTCTTAGTAAACTCCAAGAGGACCTTAAGGTGGAAGTGCG ACGCTTGGTGGATAAGTTGACACAGATGCCGGGGCCTGTTGATTCTGAAG TGGTCTTACATATCAAAGGAGTTGGGCTTATACCAGGCTCCCCAACGATG TGGCAACGTTCTTTCAAACTTACGAAAAGATGCCTGTACCAGGTTCACCG ACGACGTGGCTAAGTTATTCGAAACTTTAGTTTTATTCATTTagcttttt tgtttaaaaacttCTGTACATAAAAATAATGTTGGaagtattttgttttg attgtaatTTATCGCGAGATTTCTTATTGGTACAAATTGTTGCGCGTACT AATTTTCGAGCAATTTCGCGCAAAGGCCCGAAAATGCACGAAATTTAGTC CTAGAATTCCtctagaaaaatttaaaacaaccAAAAATTCACGATCAATA GAGTCttaaagttgtatttttttatttcatatttaaatAATACCAGAATA TTAAAGAAAATACGCTCGTGCGTGAAAATTAGCACCaattagccaaattc tggagccgctcgctgcgctgcagttgatgcgcgtgtcgggacaaaaatcg aggcggaagccattttgtttacatttttggctgAGGAAGCACTGCAAAAC AGTGCTTTTTGAGTAGATTTGGTGATTCTtgggaagaaagaagaagaata ctGCTTGGAACCAACATTAAATGTATTGGAATAGACTTCTATCATACATT GGAATAACAGACAATACTTTTTGAATATAAAATGAATGTGTGAAActtgc ttttttgtttacaaacttcACTCAAGTAGTTTTGTCGATTTTGCTGCTTT CGAAAGCTGTTGATGAAGACTATTAACTTGCAGAAGTAACTTTATATTGG TACAAACAATGACTATAATAGCTTCACAAACATTCCCTATCATGGAATTC AGCTGGGAAAGATTTTTTCGATCGCAATGAACAGTTTTGATATTGATGAT ATGAGAGAGATATCCAAGATATAGGCTCATAGTTCAAACATGGTTTCACC CATCCccttagataaaaaaaaattcacaattcaTCTTATTCATCTGAAAA ATGGCTAAAGAGACACCATCGGTCGGATCGGATTCATCACTGACTGCGCT GACGGATAAACTTTACttttaactctcaaaattttgtcaTTGAATCTTTC CATCCAGTCGTCAAAGACCGAGTTATAATGTTATAAAAGTGACTGATTTT GTAGTACGTTTTACGTACAGGCTTTGATTGGATCCAGGACAAGAAAAGGA TAAGCAAATCcgaagaaagtgccaaaaaattctgaaattttggaaGTACC GCAAAAATTGAAAGTACGTTACGACATTGACATGACTGTGTTTATCATAT AATGGATTATTATTGTTTTGGATATCCAGCACACCatcaacggctctaac ttgggacgagtggtcATATTATGGGATGGTTGACTTtctggactgtattt tcactGTTAAGTCTctgttgacaacaagtttgttttctatgatttgcgac tatgttaattaaatgactttggaggttcggtaaaatgattgccgaattgc tgtcccaagttagagccctTGACGGTACAAATCCACTTTGTAGTCATTGC ATTTTCAGGCAAAGTTATGATGCCTAAAGCACtgtctgaaattatttttt atttggattatcAGTGCTCAATTCTGTTCGGTGGAAAAGCTTCCAACTTC CCAAGTACTGTCACAAAGgattatgataaaaaaattacgagatgttttta ctttatcattaaatatataaaatttgtacaaagTTTGCATcagccaaata tttttatgcttgaaAATAGTTTATAAATTCTATTCTGTTGGATAATTTTG TGGtggtaaagataagaaaaacataACATGAAGTCAAAATACTCTCAAAC ACTTAAACATGTTTATGtatgattttactttttacctATTTCCCAACCCA AAATCTACTTATCATACTCAACTGAGGCCCAAagtgagcagaaaaagttt ttctaagaaaagtaATAGCCCAAATAAAACATATACAGTACAAAAAGTTC ATAGGCTATAGGCCAAAGACTGAGGCTgggataattgaaaattccACAAA CGATGAGTGATTATAAACGTTTCATGTTTGGAAGAGGCTTTTTCTTGAAA TCCAATAAAAGTTCCAACATAAATCCAAtctctttttccaattttttgcN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNTGCGAATGCCgcctaaaaacgaaa gcgaaagtattTTTTGTCCCTACAAGCTGCGCAcggcagcgcagcgagcg gctccagaatttggctaataaaGTATGAATTAGAAAAGAGCAGAAATCTC ACAAAACAtggaaacaaaaaatggcaTACAGGAACGGTTGAAAGAATCGC TTACTATGAATACTCGTACAGAAAGGTCAGCAAAATTAACTTAAGATGAT TTTTTCAACTAATATAATTGAGTTTAAGAAATTAATCACAAAGTTCGAGG ACCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061780TCONS_00061780Clytia hemisphaericatranscript
TCONS_00061781TCONS_00061781Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061781-proteinTCONS_00061781-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_360supercontigscaffold_360:31645..40049 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.73 0.61 1.24 1.48 0.96 0.73 0.62 0.82 0.53 0.48 0.32 0.55 0.47 0.55 0.35 0.44 0.39 0.37 0.39 0.41 0.59 0.62 0.29 0.63 0.89 0.91 0.73 0.52 0.58 0.74