XLOC_038796 (gene) - C. hemisphaerica

Overview
NameXLOC_038796
Unique NameXLOC_038796
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:26325..37757+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038796 ID=XLOC_038796|Name=XLOC_038796|organism=Clytia hemisphaerica|type=gene|length=11433bp|location=Sequence derived from alignment at scaffold_361:26325..37757+ (Clytia hemisphaerica)
CGAAATTGCAAGGAAACTGCTGAAAATGAGCAACCAAGATTTGATTATAA ACGTTACTTTCGACCCATTCAGTGCCCTTGATAAAAAAGTCGACCATTCA TTTAACGAGCTTTGTGAACAAGAAAAATTGACACGAAAACGAGAAAATCT CATCTCATTATCACTTTCTGAAGCTGttggagaaagaaaaaatgtcACCG ATTTTTATAACTGTTCCTCGCTACCATCCAAAAATATTGCTGACGTCATG CTGCTCTTAAAAAACAAATACAAACCGCGAAGAGTTCATTTCCTTTTCGA TGAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCAGAAACACTACGCA GCCGTTTGGAGAGTAAATTTCGAGAATCAGTTGTCGTGATTGCCCTCCAA AGTGTACAGAAATCTCGAAAAATAACCGAGGAAGGCAAGGTCACCAATTC ACAGGAGATTGATTTAAAAAGCTCAGGCATGGAACTTTTCAAACTACCAA CCACAATGAGGATGAGCAGTTGCTTACataaattgaaagaagtttTGGAA GGTGAAATCGAAAGCTCGCCCTGCTCCTTAAACTTAGAAATTCGATCGAA AGGTATTACATACTATTTACGTAACTTTCTTTTATAATCGCGTTCAATTG CAACAGTGTGCAAGTAAAATATACTCATTTCCATTTATGAccgaaatatt ttcttacattttgattttaatttttcaggaaacGTTTTGCTAACAAAAGA CGAATCTAACAAGGCCATAATCGAGGAAACCCAATCAAATGGAGATGACG AAAACAGACCGGGTAGCTCTCAATCAACAACAAAAGTTGAATTTCAGGTT AATGAGGTAATTTTGTTAATGAGTGTACTGTTTATAATTAGCTTACNCTA AAAGTGCACGGcaaacttaaggcttcactttttcttgcgtTAAAAGGTAG AAGATTCTTCTCTAGCACCTTCGTACGATGATCCAGAAGGCTCCAAACAC GCACTTCTAGTTTTCAcacacttccagttcttataaaatttgtgtaCTAG AACTTTCTTAggtcaatggcccagaaggctcaagtgacactgcgcacttc tgactTGTTATCACAGCGGGAAATTTCCAAGCAAGCGGCCCGCgcaataa aattttgttttttttggtctttaaaatgaatgtcgagTTACGCAAAGTGA ATCAAAATTTCCGAGTTGTTCATATCAAGAGTTACAGGTTAAAATTTCCG ATTTAAGTGCTGGTCAGCAAAATTTTCCCCCAGtggcaaaaatcgggaaa ttttcgGGCTTAAATCGGGGAAGCAAAAAGtgatagaatatcaactttgt tttttgcATCCACCTTTTCCACCCCTTCCCTCAAAGTAGAACTAATAGAA ATGAAACCAATAGTtaggcaaagaaaaataaagcacCAAAATCTAAGAGG TTCCGTACCATTTACTTCCTGGTATTTCTTCAGATTTGTTTGCTACAAAA CCAAAAATTacatagattttttatttcttcaaattGCTTCTGGTGAGCAT TTTCGCGTCAAAATAATGTTGTTATATATAAATCACAGACCAGATTTACA ACTCGTCAAACCACAAATGATTACGTTATTATCATCAGCTCATTTATTAC AACTCggtatctattttgctgaccagaacgGCTCTCTTTCGAGGGGGAAT TTGCGTATCTAAAAGATTTGTAGAAGTGTGCAGTGTCGTCACAAAAAAAC TCGGAAGTACGCAGTGTCTCGTGAGCCTCctgggccatgaccctagacag ttctagctcacaaattttataagaactggaagtgcgtggtgagccttagg AGCCATCGAGGCTTCAAACTGAGTTCCACCACTTTACCAACTACAGAAGA AAAACATGCCGTGACTTTTCTtaattcaatttttacaattaaaCCTTACC TTTATGTTTTaacgagaaatttcaaattacttCCCATTTATTAGCAAAAA GAAGATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCC TGAAAACGTTTTTAAGTCGCAGCCACAGACGAGTGAAAACGAANTTTCtt acattttgattttaatttttcaggaaacGTTTTGCTAACAAAAGACGAAT CTAACAAGGCCATAATCGAGGAAACCCAATCAAATGGAGATGACGAAAAC AGACCGGGTAGCTCTCAATCAACAACAAAAGTTGAATTTCAGGTTAATGA GGTAATTTTGTTAATGAGTGTACTGTTCATAATTAGCTTACCATTCAAAT TGAATAATGAAGCTATTTTCTCTTTGTCAGAACCGataatctttttagaa attctTTTAACAGATTatttgttaaaggttttatttttacataagtgttc ccgttttatatcagacacatattttatatctggacagtgtctacctattg ttatatcatgctgatataagcaaaaagatgttcttattttcctctttctt tgctccacatccgtgtcaatccaatttgaaaaagcttgtgaattaaaatt gatgagtaagcaaaggatatcactcttatttaaaaacaaaacctttaatt ttgtttttccagACTAGAACAGgttaactttttgtgttggatataacaac ttatttttgaaattccatTCAAATGGTCTGATTCGGATGTAATTTGCTTC TCTATAACTTGTGAAAAAAACGTGCTCTCCTTGGCAACACACCCTGCTCA TAGACCCGCTAGCAGGATCTTTCAGGCAGTTGGGCTTAAATAAAGGACCA AAATTCAATTGGGAAGATTAATATATTCCATTTTTTTGAGCCAGAAAACT CAGTAGGGATGGAAAAAGTAGCACAATTCTttttagagtataattttcca ctggggactaTATTTTCATCAGTTCTCTTTCAATATGAATAGGCTCTACT TGATCTGTGAGAAGTGGCTGATTGCCATCGATTTTAAAGCCCCAAAGAGG CTAGTTCTAGAattcctggatgggaaatgaagccacttatttcccaatCA AAACACGTAACCTGTgtgtttttcaaataaaatttaaaagtgcacggcaa acttaaggcttcaatttttcttgctttaaaAGGTAGAAGATTCTTCGGAT CCGATTCTTCTCTAGCACCTTCGTACGATGACCCAGAAGGCTCCAAACAC ACACTTCTAGTTTTCACatacttccagttcttataaaatttgtgtaCTAG AACTTTCTTAGGTCAATGGCCCAGCTCaagtgacactgcgcacttctgac tTGTTATCACAGCGTGAAATTTCCAAGCAAGCGGCCCGCgcaatgaaatt ttggttttttttggtctttaaaatgaatgtcgagTTACGCAAAGTGAATC AAAATTTCCGAGTTGTTCATATCAAGAGTTACAGGTTAAAATTTCCGATT TAAGTGCTGGTCAGCAAAATTTTCCCCCAGtggcaaaaatcgggaaattt tcgGGCTTAAATCGGGGAAGCAAAAAGtgatagaatatcaactttgtttt ttgcATCCACCTTTTCCACCCCTTCCCTCAAAGTAGAACTAATAGAAATG AAACCAATAGTtaggcaaagaaaaataaagcacCAAAATCTAAGAGGTTC CGTACCATTTACTTCCTGGTATTTCTTCAGATTTGTTTGCTACAAAACCA AAAATTacatagattttttatttcttcaaattGCTTCTGGTGAGCATTTT CGCGTCAAAATAATGTTGTTATATATAAATCACAGACCAGATTTACAACT CGTCAAACCACAAATGATTACGTTATTATCATCAGCTCATTTATTACAAC TCggtatctattttgctgaccagaacgGCTCTCTTTCGAGGGGGAATTTG CGTATCTAAAAGATTTGTAGAAGTGTGCAGTGTCGTCACAAAAAAACTCG GAAGTACGCAGTGTCTCGTGAGCCTCctgggccatgaccctagacagttc tagctcacaaattttataagaactggaagtgcgtggtgagccttaggAGC CATCGAGGCTTCAAACTGAGTTCCACCACTTTACCAACTACAGAAGAAAA ACATGCCGTGACTTTTCTtaattcaatttttacaattaaaCCTTACCTTT ATGTTTTaacgagaaatttcaaattacttCCCATTTATTAGCAAAAAGAA GATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCTGA ATACGTTTTTAAGTCGCAGCCACAGACGAGTGAAAACGAAGAAGTCGTAA AAGAACTGTCCACTACATATACCTATATGAAAGGGAAATGTGGACATTCT TTCGGGAGCTTTTTAAAACCACGAATCTTTTATTTCACCAAAGCTTTCAC ACCTTTATTTGCTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCT GTTTGAATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGCGAGGATATC TGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCC AATTGCATACGCACCTTACCTTACCGGAGAATATCCTCAAGACATCCACA AGATGAaggaaaaattcgtcaaaaatttggacaagtTGGAGACAGTTCTG ATATCTGATTATCGGTCTGTTCGTGGATTGGAAATGACTCATACAATCAT CTTTGTGGATCCAGAAAACGAGGCCAACGCACATTTTCTCGTCGAAGCAA TCACACGAACCATAACAAATCTTGATGTCATTTCAACGAaacctttttca caaaatgctTCCACGAGTATCGAACGAGTATCgaaagagcttttcaaaaa tatgtcgATGGGACTTTAGCAATCAAGACTCACGTTGAATCGAGCAAAGA CGCGGAAGATCTTCTGAAAGTACAATTCCAATACAACGAAAAGGACggct caaaacaaacaaaaatcatTTCACAGAAATTGACCGATTTCAGTTTCGAC GTTTCACAATCTCTAgatgattttaacaaaaatcaaGAGCTATGGCAAAA CTATTTCAGGTATAATTTTTCTGTTGAAATTCTCGATTTTCAATGATCTT TATTATTACAAAAAGCTCAATGAGAGGATATAAgtcatattttccaaaat taggtGCCCGCTAATCCTTTAACCNATTGAAATTCTCGATTTTCAATTAT CTTTATTATTACAAAAAGCTTAATGAGAGGATATAAGTCATATTTTCCTA AATTAGGTGCCCGCTAATCCTTTAACCAAATATATTCCAGACTAAAAAAA TACATCATTTTTTTCCTTCAGGATGGTGTTTACTCTTTCAACTTCCATTT CATCTTTGGGAACGTAAGTCAATACAGTTGATGCCCTCTGATTCGGCATT Ctgttattcgataagctcccattattcatgatattcatgacgtaatcttt tatacggaagcacccgagataacccggaactagtggcaaaataacaaaag actagtggcaaattttgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccagctggcacacaacgtt gtttcaacgttcatctaacattatatggacgttgtgaacgttagataaac gttaaaacaacgttgtgtgtcagctgggaaaagactagtggcaaatttga ccactagttccggattattttgtgtgcttccgtttaaaagattacatcat gaatatcatgaatcaaTCAATTAACAGTCATTTGACaaatttcctttaaa tttctcataaaagattttttatcGGACATTCTATCGCTATTATCTCCCTG GGGTTGGGATATTTTAAGATTCATGAtttaacgatttacgatgcacgatt cacGATCCATTTTCCATGCATAAATTATGCTGATTTATGCGCAATCATGC TAATCATGATATTTTGACAATTTACAAAGTTTCATTCGCAGAAACCAACG acaaactcaattatttttaaaagcaTGATTCATGTTAGATTAtaccaacg gattagaataggtggattaacttctctcgttgctcccaagagagatccat tgtcttctcattgttacaagaaaaatctgtaaatgaccctGCGCACTcct cgtttagttttttcattgtttttataagaacaattttccaatttatacag tttcgaaaacgaatttgtcctatgattcgatcaattttgatgattttgca aatattttaaatcctgcacttaagttttagcatcaacaaacgctagacca gttttaatgtaaatttttaatcttttgtcaATGGCAATCTTCAGATAAGT GAAAATTAACGTATGGTCTATAACTAAGAAACTATCGATGGGTCACGAAT GGGTTGCATACTGGTGAAAGAAGACTGTATTTAGaattaggaaaataaat ttcaaattatttggctaatttctgcattggatagaaagggctaaaaaagt gcattttcttatttaaaatgtaccacgtgatacgtaatgaccaatgaaaa tgttgaaagtaatgattttttacaacttttttacaacttatcaagtttta attgctagcatactcgtaaaaaagtttaataacctaacgaggagtgtttt ctatgagttcttaatccacctattctaatccgttgattatacaaattata ttcaACGAAGCTTTCATTGCATTCTCCCGACTGTACCATGATCcttaaaa agaaagtaaagcaCGTGCAGACACTTTCTGCGCTCTCATTGTTCTTAtct gttgtttacttcgtacattacggtccgcaaaacatGGTGCCGAGTATTGT TAGTCagtatattgtgtagtctaagtaaaAGCCTTGATTAGTCGTAGCTT TATTGCCTACTTATTAGTTTTTTACATAAATTTGATGTCGTAAACAAAAA CGAGAAAAGATTACGCCATTGTTTTGGAAATATGTTagataatttaagtt ttatgtaaatactttatgcatggatcgcgaatcgtgcatcgtaaatcgtt agatcgtccATCTTAAATTGCACCAACCCGNGTATTTCAATTtccataat ttttgtttttgcctttctgaaaggtaaagctTCTATTGATGATATTTATT AATCATTTCTCCTGCATATAGTAACAAATGGGATGGCAAAACCATGGAAA GTTTGACCTTGAATGATGGAACTACGCtcagtttttatggtaagtttgat tcgaaattttgttttgatatacggcaaattttataaattttcgaCTATAC AATCAAAAGCTCGCGAGTACCCAAAACGAAACATCCTTATTTNGGAATAG AGTATGAATTTTTAGACGATCCTATCATCAACACAATGTCACAACAAAag gaataccttatcggccctttttacgccggccccttttacgccgccCCTTA TTACGCCATAGCCTAATGTTGGGCTTACGCCATttagggccgttaataac gccaaaatttataANTTCTGGTAAAAAACCTTGGAACTTATGATAATATT GAAGGCCAATCTGTATCATAGGATTTGTACATCTGTTACATAATATTTTC TATCCatgatttggtttgattttatttGATCATTCATTTGATTCAATGTT CAAATNACCTCAAATTAATAAAcaatgactaaaatttacattaaaatgtc attttcagtagtaaactgttgaaaatttcatcgaaaattactgattttta aatataatatTTCACNAAATGTGAATAAACAGACGATTAGACACTGCTAG GCAACAAAGGGCTAGCATTACGAGATTTAGTGTAGTGGATGTGTAGTGGa acgagttttgaaaaattttgggaACACCCTAATACAGTAAACTCTCttta tttcgaacccctactgttcgaatctttctataattcgaactaaaatattt gtcCCCTCAGCTGAAAAATATGCAATacactctgtaattcgaatctttct ctaattcgaagaaaatttctgCCCCTTTCAAGATCGAGTTAGAGAGACTT AACAGTAGCGACAGTCTTTTCTTCNAAATTgcgaaataataataaaaaat taaccccgcttttaggttaaaattgtaaaatcttggcccttttaCACCGG TCGTTATTACGCCACGagaccaaaaataacgccaataagggccggtgtaa aaagggccgataacgTAATTCGGGAGGcagataaatttgaaaacggagTT TAGTTCGGGGGGGGGTTCGACACTCTTGAAAGATTCCTTATAAAGACCGA ATGTTCTGTTTCCTCGATTTTGCAATACTATATAAACTTCAAGTGTAGAA AAAACTACCCTCGTTCGCAATGGAATGTAATATTCCAATCTTCATAATTT TTGTTTTTGCTGTTCTGAAAGGTAAAGCTTCTATGGATGATATATATTAA TAATTTCTCTTGCATATAGCAACAAATGGGATGGCAAAACCATGGAAAGT GTGACCTTGAATGATGGAACTACACTCAGTTTTGTTGGTAAGTTTGATTC GAAATTTCGTTTTGATTTTATAATTTTTCAACTATACAATCAAAACCTCG CGAGTACCCAAACCGAAACATCCTAATTTTCTATTCTGGTGTTCTACATT CTCTGGACAAAAACCTTGGAGCATATGATAATTTAGGCCAATCATAGGAT TTGTACATCTTTTGCATGATATTTTCTATCCAGTTTAAAGGGAGAAAATG CACTTTAAATGTATCTGAAGATTTGATTTGATTTGATTTGATTTGATTTA ATTTGATTTTTCTTCATCATTCATTTGATTCAATGTTCAAATCATAATTT CATTTCATTGACAGTAGTAAACAAACAGACGATTAGACACTACCAGACAA CAAAGGGCTAGCCGCTAGCCGTACGAGATTTAGTATAGCGGGTGTGTAGC GGAACAAGTTTTGAAAAACTTTGGGAACACCCTAATACAGTaaactctct ttaattcgaacccctactattcgaatctttctataattcgaactaaaata tttgtcCCCTCAGCTGAAAAATATGCAATacactctgtaattcgaatctt tccctAATTCTAAGAAAATTTCTGCCCCTCTCAAgatcgagttaaagaga cttagCAGTAGCGACAGTCTTTTCTTCATTCAAGCATCAGAATACTGACC CAAAAATGGACTAACACCGTCATTTATAATTTTGAAACCCATAGGCTCAG AGTTCCTACGCATAGCATAAGCAAcctggaatatttttcaagttgtcatt tttgatttacagtgggaaatttgaatttagcgCTCATttctcacttacta aaataaaaatcaaatttcggaagttgcgttttttctaagaaagtgtgacc agtgaaagaataacagaatttgattggctatgtttttaACCGTCTTTAAA ATCTTGGAAATTCAAACTCACAGCCCaaaccatgctatacatttcacCAT CattctataaaataaaaaaataatagcaTTGATCTCTAGGCTACAAAAAT AAATGTCACTGGACTTGTCCCACagaatttgagcaaaaaaaaaatgaaca aaattagAGAGGGTACTTTTTTCGGTATTCTCAGAGACTAATGACGTCAC CCCCTCCCTTCAAGATACTCAAGTAAGGTTTAACGTTTTAGAAACAATTT GAGAATATGTTAAGactagaaattgaaaatttaccaTTTTACTTTTAAGA TATTTCAATGGCCTCACTTGAAAGGGTTTTTCTCTTATTACGAAATGGGA GGGACACAAAGACACTCAACTGAAGTCATAATAAAAGAAATGTTAATTTC ATCCTCAAGGGAACGATTTAGTCTTTTTCTTCTCctgctaaaaatgaaag tttcgTGCGTTTGtttcatttgctttttatatgTGAATGAATAAATTTGA ACGAAGAAATTTCTAGATCCTTTAACCTTTCATTTTCTGAACCTCTAGTG TTGTATAATTTAGTGAAAGTACCCGTGCAAAATTGAATTTATTCAAgcta agatttttttaaataaaactagTTTAGCTTGCAGCTTTATTTGACAATTT GAGAAACACATTACATATTAGCACTTCTATTTTTGTatcttttatcacaa tttcgtgattctttttaagaataaggaatAATTTTTTCGGATTGCATTTC AAATAGTTCGTGTGTACTTTTCTGCGTTATCTTTGCTGTTTGTGTTGGAT TAGTTCAcgcaaaatttcacttttgacaaataattctattttaaaaactt tttcgactttttcacattttgagaaatttttcgtggaatttattttttct cagaATGCGATCGAGTTTCGTTTTCTGCATTGAAAAGATTAATTTCCTTC TGaacaaaaacttttcaacaaaaccaaaaaataattAGTTCATCAATCTG GAAATAAATTTCCAATTCCGtttccaatttttcagctttgaatcttcttt tagtttttgagatctagatcttcatttttttctaacttCAGTTTTTTTAC CGTCACAAATAAAAGTGATTTCTCGCtgagcaaaaagttttcattcaaaa ttcaaaattttttcgccatcaattcggaaatatttttctcgttctgtttt caaaatttcagctgCAAAGTATTTTTGGTTCCTGAGAtataaccgtacat cctgtgcccaagttcaggagttgccataaagccattatggtaataaccgg gagggcacattgctatacattgcaTGGTTCCTGAGATATCGagattcatt ttttgttgaatttttttatttacacgcttttttttttataagaatacact ttataagaatgtccatgataaaaatggccaaaaaattaagaatatggtaa gaatatcaccatcatggaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattttctccaa aaagttaagaatatccatgatgaaataaaaaaaaaccattcttataaaaa aaaaagcgtgtactccGTGAAAAGTttgagtttcttctttttttcttcag atgtttggaaaattttgctcgaaaagaaattcgcgaaattcgaagaaatt ttCCACCAAAAACCGAACATCGTCAACTCGTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061843TCONS_00061843Clytia hemisphaericatranscript
TCONS_00061844TCONS_00061844Clytia hemisphaericatranscript
TCONS_00061845TCONS_00061845Clytia hemisphaericatranscript
TCONS_00061846TCONS_00061846Clytia hemisphaericatranscript
TCONS_00061847TCONS_00061847Clytia hemisphaericatranscript
TCONS_00061848TCONS_00061848Clytia hemisphaericatranscript
TCONS_00061849TCONS_00061849Clytia hemisphaericatranscript
TCONS_00061850TCONS_00061850Clytia hemisphaericatranscript
TCONS_00061851TCONS_00061851Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061848-proteinTCONS_00061848-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:26325..37757 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35 0.65 0.47 0.28 5.05 3.3 4.11 4.34 3.23 4.99 4.13 1.97 11.51 6.84 5.13 8.35 6.93 8.07 12.05 19.44 7.09 8.26 4.02 4.65 6.74 4.46 14.46 12.58 11.78 10.26