XLOC_038822 (gene) - C. hemisphaerica

Overview
NameXLOC_038822
Unique NameXLOC_038822
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:942202..947532+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038822 ID=XLOC_038822|Name=XLOC_038822|organism=Clytia hemisphaerica|type=gene|length=5331bp|location=Sequence derived from alignment at scaffold_361:942202..947532+ (Clytia hemisphaerica)
tgcatattttaaaactttcattCGTGGAACTTATGTTACAtcaatacttt tatttttagactAGAAATACTCAGGTCAAACATCAAACATAATGATTTAC AGAAGATAAGAGTATAACACTGTCTGTCACTGTTGTCACtgatctgaaaa ttcaaaacaaaatgtatAGACTGATTAAGCGATACCTTGTTACAGTTATT GTGACTTTTTGTTTGTGCTGGTTATGTATTGATTTAATGTGGGTGCAGTG GAAAAAAGAAAGCACTTCCCAtgataaaccaaaacaaaaacttcaaaacg gCTATAATGATGAGGACTACATACGCCATATAAAGAGGGGACGGAAATTC CCCACTACAACTGAAGATAATTATATGGATGAAAATAATATCCATAATGA AGACAATCATGCTAACAATATAAAATTCTTGAATAACAATCCATTCAATG ATGGTAATtctaaagaaaagaaatttgaacatATAAAGGAACATCCTAAC CTAGAAGTTCCTGGAGATATAGAGACAGATATTAAACCTGAGGAGCCTAA AATTAAAGCTGAAGACAACATGGTATCAATAGATTATTTCAAGCAATTTT ATAAATATTCATTGGATCCACAACCTGGTAGTGCTGGTATGAATGGTGCA GCCGTTAAAAATTCCATGGACGAAAAAGCTGCAGAAGATTTAGGATTCAA AAGATATAGTTTCAATGAACTGTCAAGCTCTAAAATTTCTTTAGAGAGAT CTGTACCTGATAATAGGGAAGATGCGTgagtaattttttctttcagctGA CTCTTTTGCTATCTTACATATTTGGCaatctttttcagatttttttcttt tgagaagATTTTCTGATCATCTCAAAAAAAAGATCATTGAAGACAACTGA CAAGAGCTTTTTTCCAATTTATCTTGTAAATTCTCCTTTTTTTCAGCTGT TTCAATGTGAAATATCCAACAGATTTACCAGATGCAAGTGTTATCATTAT CTTTCACAATGAGGCTTGGTCTACACTTATGAGAACTGTCCATACTGTTA TTGCAAGATCTCCACCACAATACCTACGTGAAGTTATCTTAGTTGACGAT TGCAGTGTGACAGATGATTACAGTTAGTATAAAATCCTATGTACTGGATA CTTTTTTAAGCAACTGTTTTTTTAGTATGTGACTGTGATTGCGATTCTTT ACTTTGCTCTTAATAACcattcatttgaaaaaaaatttctttcagcTCAC TTGGGAAAGCGATTGCAAGAATATGTTGATTCTCTTCCAAAAGTGAAATT ATTTCGTTCACCAAAACGTGTCGGGTTAACACAAGCAAGATTAATTGGTG CTGATAATGCAGTTggtgatgttttgattttccttgACTCGCACTGTGAA TGTACAGATGGATGGATTGAGCCTCTACTTGCCAGATTAAAAGAAAATCC CAAAATGTCAGCTGTTCCTGATATTGAAGTTATCAAATGGAAAACCTTTG AATATGTCCAAGCAAAGGGCTCAAGAAATCGTGGCATCTTCAGTTGGGAT TTGATATTCCATTGGGGAGGTTTACCAATGCATGaaattaaaagaagaaa aacacaaGCTGATCCAATCAAGTATGTTTCAAACTTGTTGTTCTTAACTT AATATTTAGTACCTTCCAACATTCaccttttggtattttttcatgTTGCG AGCAATGATTTTAAGCAGGCAAAAATGTGATGTCTAATCTaaatgattta gattttatgcattatatcttttttattatttcctaCTTCTACTTTTAGAC TactattctttttttattcttttttttagaTCACCAACAATGGCAGGAGG ATTATTCGCTATTGATCGAAAGTTCTTCTTTGAAAGTGGAGCTTATGACA GGGGTTTGACTTTTTGGGGTGGTGAAAACATAGAAATGTCGTTCAGAGTA AGCAATTATTTcttattcttttctttcttcCCCATTCTTTCACTCAAGTT GTATACGAGGCCCCCCAAGCAGAGCCCCTGATCATGCCATCACATCAAAA AGTTCTTATCTCTATGGGGCTTGTATATATCCTAATCAAATTTCATTTGT TATTAAAAAATATCTAtgatatgtaatagttatcggacagttgcgagtac aatatgagaaatattttacgagttccgagatttttccgtacaggctcgga aaatatacggaaaatacggaacgagtaaaatatttccatattgtacgagc aaatgtctgataactggtttatcggtgacccaaaaaatgcactttttgtg NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNaacatcttttcgtcaatttatatttttaca tgtaaaatacaagatatattgtactctttttaaccaatcagattgcagat attttttggatcgccgataagaTGATATGAATAGAATCAATTGTTATATA GGAGCTGGTATATGTTTAAAAGTATAGtttatcagcataatataagaatt ttcaaaatttctatttaGCTTTGGATGTGTGGTGATGGTATTGAGATTCT ACCTTGTTCTCGTGTTGGGCATGTATTCCGCGAAACAGTTCCCTACAAAG TTCAAGGGGGCTCTCTCACTCACAACACCATTCGGGTAGCAGAAGTATGG CTTGAcgaattcaaagaaatttactATATGCTTCATGCTGGAGCTGCGAA ACCAGAGATGGGTGGAGATGTGTCTGAACGTATCGCACTTCGTGAAAAGA TGCAATGTAAAAGCTTCAAATGGTTCTTGCAAAATGTTTATCCAGAAATA CATATTCCAGATAGATATCCTTATGGACGGGGAGATGTAAGTGTGTAGAA AGGAAACCGAAACCAACATAACATATAatcagattttttaaaaacatata ttCTTTTTGCCTTTGTTCTAAGGTTTTTAAGGTTAAGTTTATAGATAGAT TTCTATTTGATCTCATCCTTGTATGTCCTTATTTACTCCAAATAAATTGG GATTGAATTTGAAACATGTGCTAATTTTCCCTTTGCACATTAAGAGTGCT CCATACTTAAGTAGAGCCTGTTATGTAAAGATTAGAAAATACTAGATACT AATAAAGATACTAATTTTCTGTCCTTAATTCAGGTATTGAATATGGGCAC CAACAAATGCTTAGACTCCCTCAAACACGACAACAAAGGAGGAGAGCCAG GTTTATTCCCTTGCCATCATCAAGGCTCAAATCAAGTAAGGCTTTTATAA AGTTTCCCGTAAAATCTCTCTTACTGTAAAGTTTCCCGCTCCAAGGTTTT TTGGTTATGGTTTAAAGAATTGTTCTATACTGTTATCTCTCATTGTTATC GTTTTAACTAagtttaactttttaagttttttttttaaggttgAAAGGCT TCTTTTTTCTGTTATCATCAGCAAATATAGAACCTTCCATAATGTTATGA TTCTATTAATATCTTAGTTAGGCTCACACATTTTCTTTACCTCTTACAGT TCTTCATACACACACTTAAATATGAGATCACGCAAGGAGATTTGTGTTTC GATTTGGCCTCAGGAACTGATAGTTCGAAAGTGAAACTGGTCACTTGTCA TCATCTTGGTGGAAATCAAGCATTTGAACACCTCAAGGTTTGAACAATTC CAGTACTACTCTAACTGATGGTCTACTGTATAtaatctttttttatgatt aatTTATACAGTACAATGCTTTTGCAAGCTCAACATTTCTTTCATAGCTA TTCAGACCccaatttgaaaattcttaacctggctttattgtatatttttt ttattcatgtCAATAGAACTTTCTAGGCTACTACTGATTGTGAGACTGAT AAAAACGCTTGCTTGAACTTTCAAAAAGAAGTCAAAATCAGCCTTATAGA TTTTGTTATTGAGAAATTCATTTGCAAATGATGtccttttttcattattt caggACATGAGTGGTGCTGGCATGATACGTAGTAAAAAGTTCCAAAAGTG TTTGGAAGCACTCAAAGAACAAATTGTCATTCGTGATTGTGACAATAata atttaaatcaaaaatggAAATTCCAAGAACATCCTTTTGAAAATGTGCCA CCAGGTAGACCTAGAAAGTGGatgtaaaatatttctaatgGAAATTTCAG TGAATAAGGTTGATAGTTTTGGTTCGTGTGATCTAGGCACAAGTCTTTTT GATTATCGGTTTTTTCATTGatgataaaattttatatataaatgATACAT ACAGCGAGAATCTGTTGGGTTCAATCATTTCCCTTTgttcaagaaatatt ttgaatatgtaGAAGATTAAGTACTTTTGGtctagatttcaatttttttt taaagaatttctagAGAATATTAATAATTTAAAGAGTATATTAAACTCTT TTTTGGCAGTTATATTTGTTTACAAAATGTAACTGTATTTTACTTTCACA AACAAAACTTATTTAtgatatttaatatttttttactattttgtaCGTGG GGGAGTTGGTCTTTAACCTTTATAACAAATTAAACTAGTTTTGATGAAAT TATTTAACATGCATTTATAGATTGCTATTATTTTTTACTGACTGACacat aataatttatttttgcacTTTGTACTGTATACactaaaatattatttttg tagtttttcatGTTCACTTTTCTTTAGTACACTatcattttatagatttt tacaTTAGGAAGTTTATAGAAAACGTTCTGTTGATAACCATTATAATTTT TCACAGTCTATAACAGGTTTTTAAGAATAATAAGTTTATCACTGATGCGA GTAgaaaggtttttttaactcgactTCAGTTTTAATGATTTAGGtggttg ttttgttttgtctgttttttaaagttttatttataatattttgtagtaac ttttgttttttattcctAAGGATAgcacaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061911TCONS_00061911Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061911-proteinTCONS_00061911-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:942202..947532 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GALNT12PREDICTED: polypeptide N-acetylgalactosaminyltransferase 12 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.12 13.43 3.87 1.69 40.54 29.26 60.27 64.16 43.28 55.6 28.47 36.31 20.84 15.84 20.56 19.45 13.04 12.44 12.98 24.91 6.94 6.1 18.27 17.94 4.42 6.73 9.11 6.65 11.15 10.99