XLOC_038863 (gene) - C. hemisphaerica

Overview
NameXLOC_038863
Unique NameXLOC_038863
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:575309..584296-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038863 ID=XLOC_038863|Name=XLOC_038863|organism=Clytia hemisphaerica|type=gene|length=8988bp|location=Sequence derived from alignment at scaffold_361:575309..584296- (Clytia hemisphaerica)
TCCGCACGGATAAATATTTTTACTGAGCCTATTCAAAAATTAAAATTCGT ATCATTTTGTAAAACCCTTAAGAACATTTTAACGCTTTACAGACGCTAAA ACATCACTCAATTTCTTAGGAAATCGCACAAAAATACTGGGGAAATAATG ATACTTCAAGAAAATCCGGTTGAAAATAACCCAAACCTACAGACATTAAT CCGTTTCGGAGAAATGAATACCGGATAACCAAGGTTACCAAAACAAAACC ATTTTCGATATCTTGAATTGACGTCAAATAAACAAAATAAACACTGTGAC GTCAAATAAAAAATAAATCAATCGATGTTAACAAAAGCTACCTGATCTCG TTGGAGTACACACACAGCAATCATGGCTTCTGAAGATATGGATTTCACCC TTGAAAACCTCCTCGATTTGGCTCTTGGAAACCCTGAAATTGGGGCCGTC AACTTCAATTTCCTTCATGAAGTTATCAGTGAGATTCTTAAACATCTTGG TAAGAATGTTTTATCAATTTTTCTAATATTTTGTTGTCGACCAAACAATC AATTAGCCGTTTCCCTAACTGAGAAGCTACATTGACGAACATGGGCGGTT TTAGACCACGTCGAACTTATCAGAGAAAGAGATTTGTAGCTGTAAATTCA TTGTCTTTTAACGAGTGTTGCACTCCTTCGCATGTTTCGGACTTAGTTGC TCTATTGTCTTAAATCCGCTAGTGACTAACCCTATGGCCCGGGTGTAAGA TTCTTATAGCACGTCAAGTGTTTTGTTACTCATTTACCAACCGAAATTGA CTATAGAGCTGAGTTGGCTCTTGTGACCAGTTGTATATACAGTATTGAAG GACTTTTTTTTTATTTGGTTGAGTTGCAGGAGGCTTTGAGGCCTATTTTC GCAACTATAGACGCTTTCAATGAGCGCTTGACAGTACCTTGGACTGACTA CCCAATTCACCTCACATGGTATGGGTTGATCCGGGCGAAGGTTCATTCAC TTGCCAAGTGGACCTCTGCGAGTGGGAATCGAACTTCAGTCGCCTGTGCA GCAATCAAGGTCAAAGACCACTATATCACAGCGCCTCTATACCCACATAA AGTCTTACTTTACTCGTGGTAAGGCCAACATAACGCAACCTAGTTGCCGC CGACCAGTGATTGAAAAGTGCTTAGTGTTACTCCTTTGCAAACCAAAATT GGATAGAGGGCTGGGTTGGCTCTTGTCACGAGTAGTTTATACAGTATTGA GGGTTACATGACATATAATACCTCCAGGAATCGAACCCGAGCCACTCGCT TGCAACACAATGATTAGACATTGACATGACCTTTGATGTGTCACATAGCT TAAAACATTGATATATCAATTCCAATTCTTGCAAGTTTTTGTATCTGCAC ACTACTATATTGATGTCATTTCCAATAAGCTGATGCTCTTTAAAACTTTT TGTTTACAATAAGCGTCCTGGTTCTACATGCATTTTGATAATTTTCGTAT CCACTTTTACGAATCTGTGGAATTAATCTTGCTAGTGAAGAAGAGACCAA ATTTCATTTCACAGGACGGGTATTCTATTTCTTTGGATAAGTTGTAAATT AGATAGATGTGAGAAATTTCAAGGTCCTTTGAAAGAGATAGCTTAAGAAA TCAGCATATAAACTCATGTAAAGTTTTTTTTGGGACACCCGGTATTTACA ACAATATATCTATAATCATGCCGGCAAGTTCCTTTATACAATATTGCGCC AGGCCTCCCTATAACTCTACATGACCTCATTGCAGATTAAGCTTACTTAA TATGTTACATTTTCTTAAACAGAACAAATAAGTTAGAAAAATGTGGCTCA AAACGGAAAAAAATTCAATTTAAGAAAGAATACTAGGTTTGTTTGTAGCC TCCCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAACATAACGTCCA TATAACGTTAGATGAACGTTGAAACAACGTTGTGTGCCAGCTGGGCTTGG TCTAAAATCGACACTTTTGATCAGTAATGAAATGTAAAAAACCAAAGAAA GTGGAAAGTAAGTGCATTTCCGAGTATTCTGTACCAGAGTGTATTTTTAC GTTTATCGTTTCGTAGTACACTCTGTTCGCATTGTCTGCTTGATAAAAAA TTCCCGTACTGCGATGAAGTTTGATTTATAAATAGCAAAACTTCTCACGA CGTCTCCCCTCGCTGACCCGCACTCCATCAGAGAGGCCGGTTTGAAAAAT CTCAAATCAGAAAAGACAATGACAACAGACTCTCTACGGCAATGAATTTT GAAATTCGTGTACATGCTAATTTCCGAGGGACCTAACGGTGTTATTACGA CAACTAAGCCAAAGTGTGTAAGTGATAGCAGTGATGGACTATTGAATCAT ATTTTTTTATTATTTTACAGGAATTTCCAATAAATCGGCTCGAGTTACCC AAGAGCTTGACTTTCGACTTGCGCTGCAAGATGTGGCTGAAGAACATCGT TCCCAAAGCCCCGTCCAACGGAAACTACCACCTTCATCACGCAAAACCGC TCCTAACAACGCTACTTTAAGTGGCCATGCAATTGGATCGAAAGGCGATC ACGCCGAACCCATTAACCAGGTTCAGCAACCGATCGCTCCAGGCGGACAA CCCATGCTCTCCCAATCACCACCACCACCCTACAAGCCAAGCGAAAACGA CTTTGATGGTCCATCTCAAAGTCAGCCCCATGGCCAAACTAATCCTCAAG GTCAAGCCCAGTCTCAACCACAAGGCCAAGCCAACCCTCAACCACAAAGC TACGACCAGCCTCAATCGCAAGGTCAAGCCCAACCTCAGCTGCAAGGTCA AGGTCAAGGTCAGGCCCAGCCTAAGCCTCTAAGTGCACAAGGTCGACCGA TACCAACCAGTAGCGTTACTCCTCCTCTAGAGGACCCACGTCCTTTGAGT GGTCATGCCAATAACCAACAACAAAGACAACCGTCTATGACTGACGCACG AGCTGAAGCAGCCGAATCTTCAAGATCGAGACAGCACATTCCTGCTCCAC CCAGTTCGCACAGCCGAAAAACATCTTTTCATAATTCTAGACGCAGTTCA CTTATCAACCAACGGTTGTCATCTCTTAAGGGAAATCCTTCTTTCAATGA CACCATCGTAAGAGGGTATGTATAATTATTCGATGACTAAATAAACGTCT GTTTGAAAGCTATCAATGCCTTATACTTCATTGAAACATTCTAAAAATGA CAATCGAAATTAGAAGTTTATCGTAAAAATGGAGACTTCTATTCAAAAAT TTTAAACCGATAGCTTGAAAAGGAATTTTGATTTCTAAAATTCTCAATAA CATATAAAGGCTGTTACGCTGTTCCAGTATTGATATTCTGTAATAAGTCC TTGAAGTTTATATGAACTCTCAGTAACATTCCACATGATTTCATTTCAGA ACCCTTGAGCGTGGGAACAGCCAAACACCAGCCGGTGACATGTGGCATGT CTTGAACATCAACCGTCGTGTGGAAGCAGCGGAAGCGGCTATCCAAGGAA TGACCAATTTGATTGATAATATCAATACAGATTTGTATGAAATGAGAAGT AATAACTCTTCTGATGTTATTCGTACACAATCACCCTCCTTCGGAAAGGT AAGAATCATCCAATACCATAGATTTAGATATCGTGCTTTGGCTGGAAAGT GTGCCGAGGTTAGGTAGGAAATCCTACCTACGTCACGTGACATTACAATA GAATTTCAGCGCTTGACCAATAAGAAGCTTCGCAGGTTTTCAAAAACAAC AGTATTGCTGCTGTTGTTTTCGAAAACCCGCGAAGCTTCTTATTGGTCAA GCGCTTTTTGCGATATTCACTTTTTTTGCTTGGAAGAGCAAAGCACCCTT CGGGCTTGACAGAAATCTGTGTCCAATACATGATCGTATCAATCCGTCTC TGTCGTCTTAGTTTCTTATTTTCCAACTCTGGAATTATAAGTACGAAATC CCAAACCTTCAGAGGGCCAAGTGAAAGTGAAGGTGTTAATGTTACACTTC AGTTCAGTATCAAGCCAGTACAAATGAATAACTTTATTTAGATGAAAGTC AATTGATTTAAATGTCAAACACATTCACCCAATATATCTACGCAAATGCA TCCAAAATTAATGCCTGCCTTTAAATCCTTGGGAACCTACTTCCAAGTGT ATTTTATGATAAAAACAACAGTTAAAATACACTTTCATTTTGTACAGAAT TTGAACGATATGTCAGATGGTGGTGAATGGGCTCAAGCCATGACCAATAT GATGAACGACCTTGATTCCAAAATGAGTGATTTTAACGAACAAGTATCCA AGCTAGCTACCAAAGATCAAATTGAAGATTTCCGTTCTGCCGATTACATT AATGATATGATTAAGGAGAAATTGGAAACTTTGGATATCACTAAACGTGT TTCAAAAACTCACGCACCTGCTGGTCTAAGCGCTGGTTCGGAGAAGGACT CTGGACTGGAAGATGCTCTTGTTAGTAAGGCTGAGACTGGTATAAGTGTG ACAGATGCGGTGAAATCGGTCTCATCTCTTAAGAGGCGTGATTCGCGTGA CTCACGGACACGCATTGCGTACCAAGAGGTATCAGCCAAGATGTTGTACC TTGAACAAGAGATCAATAAAGCGAAAGGTCACGTGAACTCCCTGGAGGTT ATGCTTGGAGCAAAGATCGAGTTATCAGATATCGAGTCTAAATTGGATAA GACTGATGTAAGTCAATTTCTTATTAGTTCACAACCCGGNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCTTAGGGAAAAATTGGTGCTGGGTATGT GCGGGCGATAATAGTTGGCTTTCGGAGGTCCCGTCCATACATACTCTTCA TCCGCCTACCCTAGTACCCACAATCTAGCTTTCTTAATTTACTGAATTCC GCAAAATCAATACGCGGGTTCTTTCTATTTTCCAAGCTAAAGTTGCTTGT CGTGATATTATCGGTTACAAGAGTCTTTCATTCATAAATCATTGTATTAG ATATATCTAGGTAGCTAGGATATAGAAAACTCTAGAAAAAAAGAGCTTAC TAAAGGTCTTTCCAATTTTTAATTTTAGTTCTGGAAAGTTCGAGATGAAC TCAATAAACAAATTAAGAACGCACTCGACCAAATCTCCGCTCTGGAGAGC TCTCATCGAACAGTGGGTGAAGAGGTCAGTGCACTGGTATCACAAACTGA TGAATTCACCGTTCAACAACGTCACCTTGCCAAAGCCATGAAGAAATTAG AACGCGACTTGGAGGATATGACGGATAATTTCCATCGCTCACAAACTGAT ATGGCACAGAAAAGATCTAATAATGGATTAGACGAAGCTGCTATTAACAA GATTCGTGGAAACATTTTTGATATCCAGGAACAACAGTCGAAATTCCAAC AAAATTTGGATTCGTTAGAGCAAGACTCTAAGAATAAGGATAAATTTCTG GAGAACATCAATATCGAAATTAAAGAGTTGCAGGTTAGTGAGACCCATGC TTTGAATTCTCATTTTAAGGTTTATGATTGATAGCATTGTTTGTTTACTT ACCACGTTTCATAACACAACTTGGAACCAACGCCATACCACTTCTGTCTC AGACCATAGAAAAACCTTGAATAACTAGATTTGAGCCACCAGAGACACTA TATAGGGAGTAGATATTTGAGCAAAATCAATTTCTGAGTGTACCTTATCG GGGAAAACTTCGTCGGGAAAAATTTTCGTCGGGGAAAAATATTCGTCACT TGCTGGTTTTGGTAAGCGCATTAAGGCCGGGGAAAATTTTCGTCGGGGAA AAATATTCGTCACTTGCTGGTTTTGGTAAGCGCATTAAGGCCGGGGAAAA TTTTCGTCGGGGAAAAATATTCGTCACTTGGCCGAAATTTCGTCACTTTT CCCCGACGAAGTTTTCTCCGATAAGGTAGCTGATTACACCATAAAAAGTC TAAGCCACCTTTCAATTTGTATGGTTAGTTCACTTTATCATTTCTCTGAT ACGATAGAATGGGTTTAAAATACCACCACCATCATTTATATCATTTCTAG GAGGTGAAAGTGGACAAGGATTACGTTCAACAACAATTAGCTGGTAAGGT TGACCAAGGTTCAATCATCAATAAAGTTGAACGAGATCATTTTGATGCTT GCGTTCGAGATCTGGATGAAAATATCCAAAATATTCTTCAAAAGATTGAT GGAACTGTAAGTTCAAGTTTTTTTTGAAAAATATCCGACACAAGCTTCTT AATACACCTTTTGCCGCGCGGGCATTTTTTTGTCCGTTTTATCCCACTAA AACTGTCCCAGTCCTTTCTTCGCACCTATAGACAATAGAAAAATATGTCA AAAAAGGACTGGATCAAGTTTAGGGGGATAATTAAATAATTAAGTGGCAA GCACCTGACCGCGCGACTACGGTCGAAACGGCGTAAAAAAATTCTATAAA GAAAGGGTCAATCTAAATCTACGTCATAACCTTCAAGAATTTAAGGAATG GCTACAGAAATGCTGATTTTAACTTAAGACCCTTTAAAGCCAGAAGACTT TTTATGAGAACATTCTAAGCCTAACAAACACGAAAAACAAGAACAGCAGT CCCTCAGCCAAAGTCCATAAGTTCTCACAAGTATGTATAGTATGAAAGAA TCCTTCTTATGCAAAGCCAAGGAAAATGTGAAATTTCAGTGACTGATTTA GAGTGCTTCAAATTCAGCTCTTTAGAAGAATTAAGAAACAAAGAAGTACA AAACAAAATCTCTGATATACTTTTTTTCTCGAATATATAGGAAGCCTTTA CAAACCAGAAAATGACTACTTTGGAAGGTATCATTGGTACCAAAGTTGAT CATGATGACCTCAAAGAGATTCATGCTTACATTGATCAACGATTCAAAAC ATTCAAACCGAAAGTTCAACAAAAACAACGCGCTGAGGAAACAGCTGCTG GAACCAAGAAACAATTGATTAAGAATTGTAATTGTATTTCATGCGATAGA CCTGTTGAGATGACCACCGGTGGAGATGAAAGTAAGACAGATTTTTTTGC TCGAATTTAAAATTCTATCAGTTCGACCTCGACTCCCGCTCTGGTAAATT AACATTCTTGAATGAGTACTCTTAGATGCCAAATAAACGGAGGGGGGATT GGAGAGATTGTACTTCTGAAAACCCCAAAAAAAGGTAAATATAGGCTAAA ATCTTTGCTTTTTGGAGCAAAATAAGGCGACTTCTTCTATAGACGAGGGG GGGGGGTCCTAATAAGGTCCGGGGGTTGGAAAATTTGCGAAAAATTAACA AGCGGGGGGGGGGGGGTTTTTTTGGCACCTAAGAGTATGTCAAAAAAGGG AAAACATAGCCTCGTCCGCGTAATGTAATTTTAAGAGCACTCGACGCAAT CCAACGTTTACGAGGTTAATTTTGAAAAATTCGTCGCAATTTAAACCCAT TATCAGGTTCAGTTGACTCTCTCTAATTCGATCTTCAAGGGACCAAGAAT TTCTTCGAATTATAGAAAGATTCAGATTACGAAGGGATTTTATGCAATTT TCCAGTTGAGTGGACTAATCTTTTCGTTCGAATCAAAAAAAAAGATTCGA ATAATGACTAAGGAGGCTCCAGTTAAAATCAAAGTCAAAACTAGCCGTAG TTTTAGTATTACTATTTCAATCTCTTATTATTATCTAGTTGTCACTCTAC CGTACTACCAAGCTTTACCAGGCGTCAAATCCATGCGACCAATCAATACC TTTGATTTGCAAACATTACGTCAACATATGCACCAAACATTAACCCAGGG TAGCAACCGACAACGTTTTGAACTCTCACAAGAACGAAGCCGTCTACAAA AAGAATTACTTCAATTATGGTAAGTGGACTAAATGTTAGCTCTTCTAACA TACCATAACCTCGTAACAATCATTTTTAGCTCCCCTGACATTAAAGCATA AGTTTTAATACAGTGAACTTCTATAATGATCATCGAGTAAACTGAACCAC TATAATCCAAAAATTTTTTTTGAAAAGGTCTTTAAAAGAGTCTCTTTAAG TATCCTACACCTTGGGATGGGTAGAACCCGACCTTACTTTATAATGGTTT GATTGTTTAAAATAAAATGAAATCTTACACAAACTATCATCTAAATATGG TGACCATACACAATATGGTGATATTCCATATTGGGCTTTTCCAGAAATAG TCCGTGCCCCCCCCCTGTTGAGGATATCGGATATCCAGGGGGCTAACGAT GTTTTTTTAAAAGTGGATATCCAAGGGGCTAAATATCTACAAGGGGGGAT ATAAAGTGTTGTTTTCAAGTAAAAAATACGATATCCAGGGGTAAGCATCT TTATAAAAGAGGATATCCAGGGGGATTTTCATATTTTTAAGAGTTCGATA CTTCGAAAAATCAATATCCTCAACAGTAGGCGTAAATTTTTTTCTGGAAA AGCCCATTCTCCGCGCAAGATAAAGGGTGTCACAAATATTAAATTCACAA TGGATTGTCAGTTGCGAGATCAACACTGTAATATATCATTTTGCTTTCAG CGGTGTGCGTGATTTGGACGAGTTTGCTGTTTCGGCCACTAACCGCGCTT GCGGTGGTGAACATACACTGATTGAACAAAATCGAAGAAACCCCACTAAA AATCCCAATGGTGCTCGTGAAGATGGTTGCTATGGAGAACGACAGTTAGA AACAGAGGTCCGGGGACGAGATGGTCATATTTATAAAGGACGTTTACAAT CAGCACATTTACCGGACATCAGGTAAGCAGTATTTTACTAATTTTCGTTT TCTCCAAATTCGTATAGTTTTCTTCAAAATTTGGCACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061999TCONS_00061999Clytia hemisphaericatranscript
TCONS_00061998TCONS_00061998Clytia hemisphaericatranscript
TCONS_00061997TCONS_00061997Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061998-proteinTCONS_00061998-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:575309..584296 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43 0.33 0.84 0.6 0.3 0.14 0.13 0.24 0.31 0.12 0.06 0.13 0.59 0.3 0.06 0.15 0.26 0.16 0.89 1.19 0.28 0.27 0.35 0.41 4.74 5.72 0.21 0.14 0.08 0.19