XLOC_038898 (gene) - C. hemisphaerica

Overview
NameXLOC_038898
Unique NameXLOC_038898
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:1565496..1571106-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038898 ID=XLOC_038898|Name=XLOC_038898|organism=Clytia hemisphaerica|type=gene|length=5611bp|location=Sequence derived from alignment at scaffold_361:1565496..1571106- (Clytia hemisphaerica)
CTGATCACCAACCTAGCAATGGTTTCTATGGGAGTGGAACTCACAGAACG GCCAGATCTTCTGATCTTTTTGGTTGATGATCTTGGATATGGAGATGTTG GATTCAATAAGGAAGGTGACTCGGGTAAGAAAACGAATAGACTAGCAAGC CAGTCGGAATAGAACGATATCAGGCGGGAAAGGTGAAGCTAGGTAAGCGT AAGAAATTGTCGGCTCTCTCGCTAACTTCTCTTCGTTCTCCTTATGTTAT TCTAAGCAGCTCCCTTCCTGGCAAACGCACAACGCCGTTATTTCCGCCCT TTGACATGATTGATTAGTAGACTAATTTGCTAGTCTAAGTATATAATTCT AGGGTGTGGTTGCCAGAGTAATGCAAGGAGCCACAGGGAACAACCGAAAA GACCTCGGGGTAACAAGCGAGCTTACGGAGAATAAAAATACTACATTATT ATTTCAGATGGTTCAGGAGAAAGCCCGACCCCGAACATGGACGCTTTTTC CAAAAAAGGAATTCGTTTTACAGACTACCATTCACCATATGCCGTGTGCA CACCAAGTCGTGCTTCTTTGCTGACTTCAAGACTGGGTGCAAGAACGGGT CTCTACAGGTAGGTATTGGTGAAACACAATCTCCATCTCTGTAGCTTATT TACATATGAAGTCTCTTTAAGTTAAACCTCTATAACATAAATGTCTTCTG GTAATTAAAACAGTGAGTATCGAATTATCCATTCGTACTGGAAATCTGAT CCCTAAAGAGTGGTAACGGATATTAATTCTTTCTTTAGTCTTTTGAATGC GAAGAGCATTGGAGGACTGCCAACCACGGAATACACTCTCTCTGAACACT TGAAGAAGATTGATTACTCAACGTTCGCTATCGGGAAGTGGCATCTGGGA CATCAAGACAACTACCATCCAAATGATCGAGGCTTTGACCATTACCTTGG TGTACCATACAGTCTAGATATGGGATGTCTCGATTATCCAGGTTATTCAC ATCCAAAACATTTGAGTTGCAAGCGAGACATCACNGTACCATACAGTCTA GATATGGGATGTCTCGATTATCCAGGTTATTCACATCCAGAACATTTGAG TTGCAAGCGAGACATCACTGACGAAGTTGCTATTCCCCTGTATCGAGATA AAACTATTATTCAGCAACCTTTAGATTTGAGAACTCTTTCGGATATTTAC TTCCAAGAATTTCAACAAAGAATGGAAGAAATTCATCAAAAGAAAACTAA TTTCTTTGGTTACATCCCCTTCTCAAAGGTGCCGCGTCATTTTCTTCTCA GAGTTGTCGTTCAAATTTATTCGATTTTCACGTTGACCTTCATTTACCCT GGACCAAGCGTTTTCCACTCTATTTGATCGAATTTTATGTTTAGTGAATT TTAGTGCTAGTATTAGGGTACAGTTTTCAAAAAACTCCGATCAAAGATAT TGCATGGCCGGGGTGAGAAACTTTGTCCAGAGTATAGATCAGTGGATCAG TGGGTTTTAACATGTCGCCTCATTTAACGTCAAACTTTATTATTGGTAGC GAGAAATAATATGGTTTGAAATGATGTTTCGGGTCCTACAGATCACAAAA TATGATGGAAACCTTGATTTTTACAATTGAGGCTTGAAAATGAAAGTAAA GAAAGCTTAATGTTTGAGGAAAGTCATAACCTTATCCAATACGCGCACAA ACTACTCTGTTTATAGGTACACGTACCACTTGGCTTTGCTGAACACTCTC CAAACGGCACTGCTTTTTCGGACAATTTGAAGGAATTGGACATGAATTTC GGACGGATGATTCAAACAGTGAAGGATTTGGGATTGTTTGAGAATACAGT GATATGGTTGATCAGTGATAACGGCCCTTGGGAACTAGAATGTCAATTTG CAGGTATTTGCATTTTCGTGTTTTTCTTGTTAGCCAATGTTCTTTATTTG CATTCTTGAAAATACATAGCTATTATTTCTGTATTTCAGGGCAACCTGGA AAATTTCAAGGATTATGGCAAAAAATGAAAACTGGAGGTAGGAAAGCTTC ACTCGAGCACCTTTGAGCATCATTCTTAGCATTTCTGGTTACTTTTTTCA GAGAGCATTTAATATGTTACTGTTACACTGCTATGGTAACAATGAATAGT TTCCTGAATTCTATCGCTTTGCAAATCAATACAAAATATCCATCCAAGCT TTTTATTGTAACATACCACTGTTTGACCAATCCCGTAGCTGCTTGCACCA CTACTTAATACTATTGAAAGCAGTACAATCACGAACGCTATTAGAACCAT AAAGAACGAACTAAGGGTCCGTGACCGACTTTGCCGTTTAAGGTCATTTT AATTATTAGGTGGCGGAGGTACCAGTTGGAAAGAAACCATCTGGGAAGGA GGACATCGCGTGCCAGCAGTCGTTACATGGCCACAATACATCAAAGAGGG GAGGGTATCTGACGCCTTGATCAGTGGTTTAGATATCATGCCCACAATGG CAAGTTTGATGGGGTTTGAATTACCAACTGATAGACATTACGATGGAGAG GACTTGTCTCGTGTTTTGAAAGATGGATCGGATGAAGGGCGACTGGTAGG TCATTAGGCTGCACACATCCCCTCTGATAAGTTTTGATATAGAACTAATT TGGGGATGCATGCAGCCTAGTAGGTCATATCACTTCCCTGTCCCTACTGA TATATTACTCAGAGCCAATATCCAATCATAATCGCTAGTCATGGTATCTA TTTGTTTTAGAAGATTTTCGATAACTCCTGTCAGTTTGGTGTTGTATACA AGTCGTGCCTTTTCTAATCCCAGCTTTCCTCTGCAAAATAAAGGGTAGAT TGAAAAATACTTCCTTCCATTTAACAAACATCTCAGCTAATTTTTAGCAT TTTTTATACATGCGTAGCTAATGAGCAGAACATTTATAATTATTAAAAGG TTTTGTGAAGGGATGAAGCTAGATGTTTGATAAGATAAGAATAATTGATC GTTAATTTAATGACAGTTGGATGATAATCTTTCAGACAGAGAGAATCATG CTGTTAAACACGTGATTGGTACAGTTTTCACATCTCTCCACTTCTTTCTC TCTTTTTAGACGCTTTTCCATCCGCGTTCGAACGCAAGGGATAACGAGAT CACTGCCGTCCGGTGGAAAAATTATAAAGCTGTCTTCAAGTCCGGTAAGT TTCCCTCGTTGTATTTCCTGCCTTGTGCGTTCAATATCCAAGGGGATGGA TAATTGCCACTTAACGTAAGCTTTAACATCCCCTTTATATCCCTTTTAGT GGTCAAGTGTGAGTTGTGACCAAGCATTTTCATCTAACAGTTCCAAGAAC TATTCCATAATATTTTGATAACTGAATAAAGATTCGCTATTCAAAAATTG ATTTTGGTATTTGAACATAAAAGTTATATCTCAGGTTCCTTAACACTTTA ACAAAGAATTGCCTTTTATAAATTGCTTTTTAATCAAATCCCTTAAGAGT AATTAAGAATTTAATTGCAAAAATGACGTTATGAACTTTAAAAAGATGTT AATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCTTTACTCTGTC CGCAAAGAATTGAACTATTTTAAATTTTGCGGAAAATTTTTGTAAAAAGA TGTGTCAAAAGTTATGACTGTTTTTTAAGCAAAATCCAGGTGAAAAATTG ATGAAAAACCACTATTTTGAAGATTTCGAGACAAAGAAGCATTTACAAAT ATTTTGCGCAAAAATATTTATTGTTCGGTCAAGAATGTGTGCTGGAAATG TGAGCCAGTGAAAATACAAAGTTGAAATTGAAGAAATTCTGATTATTGTC ATTTGTCATTAGTCATATTGATGTTGACTCTCTCATAGTCAACTTGTGAC TGAGTAGCGAGTGAGAAAAAGTTGGCCTTTTTTATAATAAATTTGAAAAA AACAAAAAACTAGTTTGACAAGATATAAAAACAATGAATATGTAACACTC TTGAGAAATCAAATGATAATTAAATAAAGATGCGTGTGAAATAATTAATT ACTAGATAATGACTAAATGACAAAATGATAATAACTGACAAAGTATTTGA AATAATTGATAACATAGATAAATGACTTTAAAACATAGAACAAAACAAAC GACGCATGAAACACGAGAATGCACAAGAGAGAGACGCAAAGGACGCTGAA AAAGAAAGCACTGGGAAAACAAAGGACGCTGGGGACAAAAAGACACTGAC AAAAACAAGACACTGAAAATTGAACTATAAAATATTTTTGCTTTTTTAAA TATACTAAAAATTTGATGAATCACATTACAAAGATGTTTTTTCTTCACCG AAACTAAGCTCTTCAAAGTTGAAATACTCTTCCTCGCAAAAGTCTCCATT TTCTTCTTCATCAAATTTTTTTCAATGCAATTTTTGAATTTTCAGATTAA GGAATAGTTTGTCTAACAGAAAATGTATAACATGCCATAGTTTTGTTGGT TACATCAGTCAGAAAACACATTTTAAACACGGCAATTATGAAAAATTCAC TATGGTCAGAGCCCACAAAAACTGATTCTAAATTCTTTTCGGGGAAAGCT TTCGAGAAAAAAACTGATCAAAAGCTTGCCAAAATATTCTCAGAATAACA TTTATCTTGATTCATATTTTTGAAAGGAGAAAGGAGAAATCAAATGAAAC TAACATAGAAATGAGTATTTAAGAGACTCAACAGGGCCCACGCCATGAAA TTGAGAAAGAGAGAGGAGAAATGGCCTTTGTGTGGGAGGGGGGCAATGAA TATAGAGTCTAAGGTGGCGCAACCAAAAATTTTACTTTTCAAAAAAGTGG TGCCCTGTTGAATCTCTTTACTTTCAATAAAACAACTTTAATTTTTATCA AAGTGTATTTTCTACAGGTGGTTTGAGGCTTCTTGATTGTCACTTCGGAT CATCGATGGCCAGGACGTACGATCCGCCATTATTGTTTGATCTGAAGGAC GACCCTTCAGAAGCAAAACCTTTGGATACAACCGACCCCTTCAATAAAGC ATTAGTCAGTCACTTGAAAGACTTATTAGAGAAATTGAATGAAGATATTG CTGGTGATTTTAAAAGCAAGTTTGATGATCGGCAAGACTCATCAGTGATG CCGTGTTGTAACGCACGAAATAGACATTGCCGGTGTCAACCTCTGATTGG TTCAGATTAATGAAATAAAAATGTAAATAAAAAATGAGAAACATTATAAT AAAGGTCCTTGGAGAAAGTTTACTAAAAATGAAAACATACTTCATTTATG TTTTATATACCAGTGGATACTACTTTAATGGGATAAATTTTCGTGGGGAT TAATTTTCGCGGATTTCGCGGATTTGGGTGTCATCCGCGAAAATAAGTCC CATTGGAAATTTGAAAAAGGCCCATCCGCGAAAATTAGTTTCCGCGAAAA ATTTGAATTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062067TCONS_00062067Clytia hemisphaericatranscript
TCONS_00062066TCONS_00062066Clytia hemisphaericatranscript
TCONS_00062065TCONS_00062065Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062067-proteinTCONS_00062067-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1565496..1571106 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ARSGPREDICTED: arylsulfatase G isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.84 0.67 0.84 0.63 4.01 2.16 1.88 2.15 1.89 1.39 1.6 1.72 5.43 5.41 7.7 10.02 2.87 3.38 13.17 10.57 4 4.77 6.55 6.57 11.1 7.62 41.55 35.99 6 7.05