XLOC_039069 (gene) - C. hemisphaerica

Overview
NameXLOC_039069
Unique NameXLOC_039069
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_363:76051..81610-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039069 ID=XLOC_039069|Name=XLOC_039069|organism=Clytia hemisphaerica|type=gene|length=5560bp|location=Sequence derived from alignment at scaffold_363:76051..81610- (Clytia hemisphaerica)
GAAACATTGAGCAATCTCGCTGGGGTTATTTTGTCTTTTTATGTTGAATA TTAGTACAAGACACCATTTAGAAACCATTTTGACCCTTTACTGGGCTTTC GTAGTCTTAAAATGGACAAAAAATGCCATTTTACTCATTTTTCGCTTTAT TGCGAATCAAAGACCCCCTGGGGAATGCTGGATTTTTGACTTAGGAGGTT AAAAATTGCGCAAAATGTCTTACAATAGATTAAATTTTCACACAAAAATA TTACACTTTGAATTTTTTGACATCATGCTAAAAATGGTAGTTGACGATCT ACCCTATCAATATAGTATGATTGACAGATTGAAGTTTTCACCCGCGCAGG AGTTCGCGGAGCGTTCTCGGCTCAATCCTTGGACCGCGCTAAAAATGGTA GACTGAGCTGTGATAGATCATTTCGATGGAAGTTGTTGNNNNNNNNNNNN NNNNNGACAGAAAATCGTTTGTTTTATTGTCAATGATGACAGTGCGGTTA TTAATTTTGTTAGATCTGACAAATTGATGTTTGTAAGTGCACTTTATAGT TTTGATTCCCATTGAAGAATCATATTCTGGTTTTCATGTTATTAGATGCT GTTTTAGAGCTTTAGGTCTACACTGTAAGAGAAGAAAGATTCTTTTTCAA TCACTGATTCCAACTTTCACATAATTCCTATCTCTAAAGAAGGGTGTCGA AATTAGAAGACGGCGGGATGTCGAGATTAGACCACTTACGGTAGGAGTCC ACACCCCCTGGAAAGTGGAATTTTGTGAAAAAGGGCCTAGAAAGTGACTA TTGATGCCAGTTTTGGAGGAGAGAACCCCCTGGAAACCTTTAATAACCCC CTTGGAAAATCCAAAAATGACCAAAAGCCCCTTGGAAAATCAAGGCTCAG ACCCCCTTGGAAAAGTTCCCCTTATTTATTCCCCCTAATTATTTTAGCAC TAGAAAGCTGAAAACCTCAGCTTTCAGATGGTGTATGCTTTTTTTTCAAA AAATTGCAATTTCTTCTATTTTTCGAATTCCAGACAGCCTGTAGATTTTC AAATAAGCAGCATGTGCTAGATTGTAGTCTAATCTTACCATGGGTTTACT AAAAAGAAAACGCGATTGAAAAGATGAACCAGCTCATTCAAGAATTTTGC GGTGCCATGTCAGCGCTAAGTCATGTTTTCACCTTGACGCCGGTGGTCAT TAATGATTTCCAGGTTTTTTTTTCCTCATAAGATGGCATCAAGTTTTGTT ATTTGTGTGATATTTGGGGTAATTTTGAAAAGAGGGCTAGAAGTGAGTTT GCAATTCTTATCTTAAGCTTATCAAGACAAGATCTATGTAAGACTTTTCT ATGCAGCAATAAAACTTTTTCGGTCAGTACGTTTTTAGGTGGGGTTGGTC AGATGACATCAAACTAATAAGTCCAGCCTTGTCCAATTTTAATTCGAAGG TTAGAAGAAAGGACATCTGCTCAAATTACTCAGTTATTTTGGGAGAGAGT TGAACAGGATTGGCTAAATTTGACAAGAAATTATATCAGATAATGTGTAA GACGGTTGATGTTCTGGGGCTCCTACAATTGACCAAGTCTGGGTTGAAAA ACAGGTCATTCACCATCTGACTGGTTGTTATTTGGTATAAGGTTTTTGAG GAAGCTCCATGTCAGTCCATGTGGTTCATCTATTGGTCATCTTGACCAAT GTGACTTTTCAGGGTGGTGGATTTTCCGAATCAAAACAGTTACTCTGGAC AATCTCAAGACTTTGTCTGTCAGCTTATGCGGTGTTTGAGTTTACAGTCA TTTGACATCACCACTCCAAGGTCAACATAATCATACTTGTGAATTTCTTC TACTTGTGTAGCTTGTCTTTGCTGTAACTTCAGTTTGACACCTTTGAACT CCATGGTGTTATCAACCAACCAATAATAAACTGAATTTAGGTCTCCTTGA AGTTTTAGAGTATCCTCAATGTTTTCTAACGTCTTTGATAATTCTTGTGT CATCTGCAAAACTTTGTGTTGAAGAGTGTTGGGCTTCATCAATGTCCCCC TTAAAGATTAGGAAGATAGTCAGAGTCTCCTTTTTCCACCATCATGGTGA AGTTGAGCTCCAAATCCTGGACTAACGAGTTTTGAGCTATAACTTTTGGA TAGCTTTTAAAAGATTGTAATCACAATTATAACTAACAAATTTTTTATTA AGTATTGTGCAATAAAAAGCCTAAAAAGACCAATTTTTGTTAACAAAGTT ATTGAATTTGTAGGAAGGTTTTGTATTTTGCTTTAAGCTGTATTTGTTAA AAAATTTTAATCATAAAAATATTCAACTGACTATTCAACTGCTAAGCAGT TTTGCCATAACAAAGACAAGCTTGAAGAAGAAGAAGAAAATCTCCAATTT TTAAAACTTTCAACAAAATTACTTGTCGTTATGTATTGAAAGACGTCTGA AGACGTTCAACAACAAAAATTTTGTTTGATAAATATTTTGTAGTGGTACT TTACTAGAATATTTTTTAAACAAATGACATTTATGTACCAGACGAATAAA TAAATGTGATTGCTCATACCTGGTTTTCACAATCTGTGTGTGTTTAATTT TTGAAATGTTTTCATAATATACTGTGTATTGCTATCAGTTCAATAAGCCT GTATTTACACCTCTACTGATTCTCAAAAGCATCTCAGGCAAGTTAGGACT CCCTCCTTTGCAACAATGAATTTATCTCGAAGTAGAAAGCTTTTTTACAA CAATCTGGAGGGTAAGTTTCAGGTACGTAGTATTATATTTGAGCTTTGAA AGTTCTTTTTATACAGCTAGTCCACTTAATCAAAAACAATAGCTCTTTTT TAAGACTTTTTTTTAATAAATCTTCGAATAAAATTTTGTAATAATTTTCA ATACCCTAAAAACTGATCTTGATTTAGTGTAATCTGATCTAGTCTTTGTT TGAAACTAGACTTTTTTTTAAATTGGTGCCGACACAAGCATTTATAGAGA ACCCTTTTCTAATATTTGGATCAAACTTTTAGAGTAAATTTATACCTGGA AATGCCTCGAAGTAGATCAAATTCTCGCTCGAGGAGTCGTAGTACATCAC CCAAGAAAAGAAAAAGTAAGGTAAGAGCAGGATGGCATCGTTTTCAAACT TTTTTTAAATACAGCAGTTTTGATTTGGCACTGTTTCCAATTGTGATAAT TATATTTTGTTTATCTTGTCTTATTTCAACTGGGCTTTCTAGCCTTTCTA TTGTAGCCGTCTATAGCTAATTGGTCTAAGTAAATCTCTCATTCTTTTTT TGTGTAATTTCAGGATCGGGAAAGAGAGCGTGATAGAGACAGAGATCGGG ATCGGCATAAGAGAAGCAGTCATCGCCATCGTAGTCGGTCACCTGCTCGA TCTAAAAGAAGAAGTCGCAGCAGATCACCAAGTGTTGATCGGTTTGGACG GTCCACCAAACGCAGGGATAAATTTGCTGATGAAGATGATGATACCAGAG TGGAACCAGGAATGAAAAATGAAGAGATGGAAAGACAAAGAAAAATGTAA GCCAAGTCTTAGCCGAAATTATCTTTTCAACAAGGTTCTGATTCCAGCTG ATTCTGTTTTCCCATCAAGATCAAAAATATACTAAAATGTACAGACTATC AATGTTTTTTTGGAATTTTGTTGTTCCCGTATACGCTGGTATACGTGTTA TCACCCTCTCTGTTGTGTTTAAGATCTCTCATTAAATTTTATATGAAATT GATGCGTTAGTGGTATTTCTTAGCCTTCTTTGAATGTGAACTGAATTATG ATATGTTCCTGACAGGACAAAAATAAATCATCAATCACTGATTCTATATG GCTGTAATTTTACAAGTATCTTGTAAATGTGTCCTGTTCGCCCTTTTGAT GTTGTAACATAAAAAACTATTGATGAATTTGGTTATTGCTTTTTCAGTCG AGCAACAGAGATGCAAGCGAAATTTATTGAAGAAGAAACGCAAAGGCGGA TCGAAGATGTGGTCATGAAGAGAGTAGAAGAGGAGTTAGCCAAACGAAAA ATCGATGTTGACGAAGAAGTGATGAGGAAAGTAGAAGAAGCCAAGAAACA CGTTGAACATCATTTGGAAGGCGAATACGAACGAAGGACGAAAGAAATTG CTGAACAGTTCAAATTAAAAGAGGTACGTTTTCACTTTATTTAGGATGTT CGATTGGTTCTTTGAATTCATGATATGCACCACTGGAGAGTCTTCTGAGA ACTTTTAAAATTTTCGATCCAATACATCACTTAAACAATAGAAAAGGTGA CGTATTTGATGAAAAAACAAACAGAAAAGTTGCATAATTTCGTGAAGTCA TTGCAGTGGTGTGTAAGAGAAAGATTCGAATTTCGGGGGGGGGGTCAAGT TGATTGTTCAGCTTAAGGGATTAATGTTAAAGTTCGGACTACAAAAAAAG ATTCAAATAATGGAGGTTCGACGAATAAAGAGAGAGTTGACATTAACACA TTTCCAGCCAAGTCAAAGACTTCATTACTCAATTCCTAGAGAAATATGAG AAACAAATAATGCAATTCCGTTTTTAAGCAATATTCTTTTTGGAGTCTTT GTTCACACAGCAATAATATTTCTTCCTTTTGTAGGAGCAATTAAAGCAAG AAATCGAAAGGCTGAAAAAAGAAATCGACCTCGCCTATTTGAAAGTCCAA GATACAGAGAAAAAATTGGTAGGTTTCTGAACTATGAATGAAAGCACTTT CGATGTTTATTAGCTCTGAATCCTTCCCTGTGTTATACATTTGAATTGCA ATTCGCAACGTGATGCAGCCATTCAATATTGACAACTCCACAAATGGCGA AAGTGGAAACGGAACTAGAAAGTTTGAGTGGAGTTAACTTAATAACGGGG GAGGTTGCACCGTAATGCCTACGCCTTTTTTTATGAATCGCCGTCAATAC TGACAGCAAAAAATCCTTATTACTGAATTACCCTCGATTCTTTTTTCAAC ACTGAGACAGACATAAAAAGAGACTGATGCCGTAAATAGTTGTCCTTATT TATTTCAACCCTATTTTTTGACTCAATTGATTGATTTTTTTTCGTACTAG GCCGAAGAACGACTCACTATGCTCGAAAAACAGCGTGGCTTAGAGGACGA AAAGCGACAAATCGAAGCGGACTTTAAGAAAAACGAAAGAAAAGCACAAG AAGTGATATTAAATAAAAAGAACTCGAGACCAAAATTGTCTTTTGGATTG AAAAGTCTACCCAAATAAAATGAATGTCCGGGTAAGATTATGTGTTAGAT GGACACTGTAAATATGTTATCTGATAAATGGTCATAAGTTGAACGAACAT TTCGTGTATTGTTGACACGATTTCACGTCTAATGGTCATAAATTGAACGA ACATTTCGTGTATACGTTACATGTTTCTTGGAGAGGTACTACTGGGGGAT TACGTCGTAAGTTTTAAAATCACATTTTTTCTTTAGAATTTATTATTTTA TTTGAATATTATGTATATTTTTATTCTTTTTACAAAATATGTTAAAAGTA ATAAAAAACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062354TCONS_00062354Clytia hemisphaericatranscript
TCONS_00062353TCONS_00062353Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062353-proteinTCONS_00062353-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_363supercontigscaffold_363:76051..81610 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ARGLU1arginine and glutamate-rich protein 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.61 18.12 15.11 14.37 53.5 42.37 44.72 48.16 36.53 27.06 34.85 29.97 23.67 25.23 24.03 24.91 37.17 35.08 15.48 16.47 27.96 25.79 26.98 24.83 37.63 40.17 23.96 21.43 21.88 22.96