XLOC_039084 (gene) - C. hemisphaerica

Overview
NameXLOC_039084
Unique NameXLOC_039084
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_364:22832..33225+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039084 ID=XLOC_039084|Name=XLOC_039084|organism=Clytia hemisphaerica|type=gene|length=10394bp|location=Sequence derived from alignment at scaffold_364:22832..33225+ (Clytia hemisphaerica)
gaaaaatatgaAAGTTGAATTTGATAACAATTTATCTACTGGCGacgggt
gacgaaattttgtgAAGACTTAGCCGtaagttttgttttatttttataag
tcattgaattcatttgtACATTTACAAATGGCCAAGGCAGAACTACCTTA
AGTGTATTATGGAGTATTCCATGtaaggtaagtgacctaccgttAGGTGT
GGCcatattgagtttaaagccccggaGGAGCTAGAAGaggaattttcaac
tttttcaggcaagaaaaaatgaaccCCAAGATTTGCGCTGTATTTAGAAT
GACGGATTGAACCTagccctttctttgtttttgcgcgaaacatttttcaa
aatctggcgataggttttactttcaatctggcgattatgtaaaaaaaaga
aCCGTGCgttttagatgggaaataagtcgTTTCATTTCCAAGAGTTTCGG
ATCTAGTCCCCTTCAGTGCTTTGAAATCAAGAGATGTCGCTATGCGTTTT
TTCAGGTTTCTTAAAGTGAATTGTGAGTGTCGTACGTAGAAAGCGAAAGT
AAGCTAGTAAGAATAAAGAAGATTTTGGACAGACTTTGGGAagattttac
cattttttactaaaatagatAAAAGTTTTTAAGAAATTCACTACGAATTA
TTAGTTACTTTTTGGGTGTAAAATTCATACTCTCGAAACTTTTTTGCGTT
TCGCGAGGAAATTAGCTTTTGCAAATTAGCGAAAGCTACAATgttcttcg
tgtgcacagactttttaaaatgatttcaaacgagtggtgagaaaaatttt
gggATAATGAGGATAGCGAGGATACTGAGGGTAGCGAGGATAGTGAGGGT
AGTGAGGATAGTGAAGACAATGAGGGTAATGAGGATAGTGGGTACAATAA
GGATAGCGAGGATAGTAAagatacaatcatggtcgaaatcaattgagaat
ttaaagcttatttaatcggatatttcaatttggttcgggtttatagactt
ccaggccttattggaccatgtcttaagtctcatgttaaaactcagagtta
aaactctacccttccaacctgaAATGAAAATAGCGAGGATACTGAGGGTA
ATGAAGCTAACTGTAAATGTAAACATGTGGTAACCATGATACAATTCGAC
CGCGTGGTGCCGTGATGCGATTCGCCATTTTTGAGgggggtccataatgg
ggtccataaaaattttcgctgaatcagcaaaaacggcaaatcctgtcttt
tttttgcaaaatgtaggatataaataactttaaagcttaatattttcagt
taagctgtttttctaaaattttcacagcatattACACACATGAATCATAG
TCACTATAAAAAACCcaggtctggcaatgtattgttttagctttttgttc
aattttcttttgttgcaAATAAAAGACAAGTTGTGagttgcatacttttt
gatcacgttaccaaaatctcctcttgggattggtctattttctaatcaca
tgatcaaaaagtttgcaaaataaatcgatttcttttaacaaaaaaaaaga
gacaaaagccttctaGACCAGTGTTTATTCAAGGAACTTGGTTTATTATG
ACTACGCATGAATGGAAccattttcgaaagaaattggttttcagaaactt
aaTTTAGAAGTCGTTAACCCTTTAATTACcgcggtcatttttttctaatt
tttttaaagaaaatcgcttgttcaaaccatggaggtataaagaaagacag
gagaagtatgctattgtaaccaagctcgccctacgattaaaaaagttacg
atgtatgcatgctcataatctcatatatcNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNggcgagcttagaatttcttttgatacattttataaaa
gaaatcaaaagactttaacgaccaattaccgacacattcaactcctgttt
tctttatacctctatgttCAAACCaaagtataagaaagccgcgacTGGAA
TATGTactgcattgtcttttcagttaattgatGTTCCATCTATGTCTCCG
agatttataagaacatcaagatgctcggtttattattggtagatagtttt
tggaatttttctcttattttccttcacaaaaagtttttttattgctagat
atctttgaatctgtacccaatagaacacttaaactaattttggacatatt
ttatatatattttaataatagtttttcgccaaaattcagattataagaac
tatattcaagaatAAGAACTTttctgtcagtttgaatgatagattttgaa
ggtgctggcttgaaattttcacagtattatcttgatgtacgttttcaatg
atttctaaaaagatttcactgaaatattgtgaaggcattagGCACgttat
aaatttttgatttcttttagcCCAGCCAtcttgtgcttgtttaaatttct
tattgttgatctttcctttacaatgattttgtGATGCAAGTGTGTTATCA
aaggcatatcattaatgtctaaaatgcactgagaagtaagtattcatgac
aaaccaataaaatttacctttaaagatgctacattaccgATTTCTTggtc
aacaaatagtcatcaaatacgacagagatagaacaacagaaattcagata
ttatcattccagccgcggctttcttatactatgttcaaactttaaaggct
tatatctccggatctagaaggagttagaagcctgttcatagctcgttgga
tagcttagagtctcctcttccTTTTAAGCGCCTacgctgcgcggacctgc
ctgaatgattgaaaggtaaaacttcaaattaattcgctagaggacagaac
caagtaaaacagggccaattttggaggttcttgaatCGCTCGTTGACAAG
AGATGTcgaaaaacggtcaaaatcttaaaaaagtggatttttgtcaaatt
tttgcatattttttgtCTGTTTGGCTCAAAAtatcgctggaaagactcac
ttttgatttttttgcttgaccatgaaacccaatccaattcctacgagtta
gaccatgacgatttctaactcaaactgggcattattTAGCCCATGTCTAG
TATACCCGTCATTGGTActtaaatattttataaaaatcataaattttacg
tCCTttgggtcgtaaatttaagggaaaacaaaaTTATGTTTATAGTTTCA
TCACcttttaccactgggcttaataatttgattttaactacacctacgtt
ttgggggtcccaaacctgcgttttaacaaccaggggtatactgtaaaaat
ttcatcaaacaaatttatgcccaaaaccctctaagtcaaatttccaaact
atggtcgAAATTTCGTATTCATATCTTATCTTATTTAAAGATCTCGAGAG
ATCACTAAGATTACAAACCTActttttgggggccattagaaaaaagctac
ctatctttaagcgattgaaaaatattgttgaaattgaaaattttgaaaaa
gaactttcggaaaataaagtagagatgttaaagttttgcatGCAGCAAAG
TTTTTGTAAAGCCTTTTTTCCTCTAGATTCGAGAGAAATTTagatttgat
cgacgttttggggatCACATACTGTAGATCTGAAAGACAAAATAACATAC
AAAGACACTTCATAAAGAGAACAATTTATCAAAAGGTTTGTCTTAACAAG
CCTAATAAATCTTTTAATTAAATAGCTTACGTCAAGTTTTGTCAGTTAGT
ATGATTGGTTCGTATCCAATAACTATAGGCGTGCTAATTGCTAACATAGT
AgatgttttttatcaatttatctTTCTCAGAAAACTTGAGTGCTTTCTCG
AAAAGgaaggggtaattttttgtttattattagtTGTCAGTTACTAGtgt
acatgatttttttgtttgtgtttttaTATTTGGATATAGGAAAATGAGTG
TTTTTAGAACACAAGAATTTAGTAGCTGAAACTCTAGGATCACAGAATTT
AGGATATGTGCACATTAAACGTTGCAGGCCTTCTTCATCACAAAATTTGT
CTCGAATCTGaattaaaattataacaaaTAGATAGGAAAAAGATATAGAA
AGGTGCACATCACATTGCTTCTACCGTTCTATCTTCTATCGTTCTATTTC
CAACCAATGAGTTTGAATTAGAGATTCCTTTCAGATAATTTTTATAGAAA
CAATGACAGAAACAACTTATGATTCAATGTTGCAATTTGAAATAGACGGA
GAACATCCTCCTCCACTAGAAGAACTTTTAATGGATAAATATGATGAGTA
TAGAAGATGTTTACTGTCGACGGAGTTGGACGATCAACAGCTCCAAAAAA
TGGTCCAATTCATCTTGAAGACGCGCTCTTACCAAGCTTGTTTCTTCCAA
GATGAGAACACTGATAGCCTCGATCTGATTAAAACGAAAGCTCCCATCAG
TTATTTGATGTTCCCCATAGCAACAAAAGCTATCAAGACAGGGAGCCGTT
CAGAACAAGTCTACTTACAAGACTCTGATGTTGATTACATTTATGAGATT
GGCCCTCTGCTGGTGGAAGAAGTTAGCCTGCtgaataaaataataaattt
gcGAAAGCATAGCCTATGGTACAAAGAAACAAAGCATGCTGGGTTTTACA
CCGTCATAGATGACGAGGGTGGACATATAGCAGCAGTTGCAATGCAAGCT
AAAATTGATTCTTCAGCAAAGTCAATCAAGTTGGTAAGTAAGCCGTATTA
aaccttaaccctttaagtgccatggtcatttttttctaagttttttaaag
aaaatcgctagttcaaactttaaaggcttatatctccggatctagaagga
gttagttTATAGTCCGTTGGATAGCTGAGAGTCTCATCTTTCTTTTAGGC
GCGGCGGCTGAGGGGGAGGGGTAGGTAAGGGAAGCAGACTGTGGACCtac
ctgaatgatagaaaggtggtAAAACTTTAAATcactggaggacagaatca
agtaaatcagggccaaatttggaggttcttggatcactcgttgaccaaaa
atggtcaaaaaacggtcaaaatcttacaaaagtggatttttgtcaaatgt
ttgcatttttttgactttttaccttaaaatctcgctgaaaagactcactt
tcgatttttttttatgcTTCAACATAAAGcccaatctaattcctacgagt
tagaccaaaaataacgatttctaactcaaactgggcactACATTACCTAt
ttctgatatatacgacattggcacttaaagggttaatgatATCCTAAAAT
ACAAGCCATCTAAATACATTTgagtttttgtttgattttttggaaGGTTA
ACCAACATATCTGAGTGTTAGTTAGTCTGAAATTTGGTACGTGGCAAATC
ATACGCAATTTTCACCCTATTAAaatagtttttgagttttattttttctt
cgttAGCTTTCAGAACGTAAGGAAGTTTCAGCAGTTTTAAccaccaatca
aaacgctgaagATGATAAGGATGACGATTCACTTGGTGAAGATAGGGTCA
TTGCATTACCTTTGAAACAATGGCCTCCACCTAATTGGAAGTCATTTAGC
AAAAGAAAGCCTATTTATTTGCAAAGGATCATGGATAAGTTAGAAGGTAA
GTAGTTCAATCCTCTCTGATTTCACTGTTCGGTTTTGGAAAAACTActag
aaaatgtttttagatctaatcatgaaggtaataaagatagatggagagta
AATACcgcttttgttctattctgatttatcatcggaagcaaacagctgtt
tggttgctttgggaataagacgATTAATTTCTGGTATACTCGTGGggata
tttaagatgaatgaaaagacattacatttttaacaagtatattgaaatat
aatagccttgtcatgaaaaattgaaaaaaacttcacataataagcacaat
acNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNtttgtcagagtatgaaaaccgctgcccacttagac
gtgaagattttaagataagaaactttcaatgataatgtgatgcgactctc
aatgttcacaaaatgccaccctaaaaatatatccttatgaaattaatata
ttcttttatccttaaatcagttgaaactatttcgaatcgcattttaagta
agatttctcgcaaaattaagtttttcaaaatcaacggaccagcctctttc
tgttcttataaacttaTAAATTGATGtgttttgcttccaatgatggtaca
tcaaagaaaagccgctttgaatagatttataaaagatttcaacggccatt
taggtcattaccgagacgttttctctccatctgaatctttattaccttca
tgatctaatgggctcttccagaagaaatttgaaaatatcctatatatcct
ccaccctccatgcacaaaaactttctggaagagcccaatagaAGAATAGT
TTTGTTAAGATGTTAAGAATATGCGTTGAAATTGTTGAATATACTTGGCT
ATCGCCAATACCTATCCATTGGAATACAATAGGATTCTTCAACATCTCAT
CATTGGATATTTTAATgattaatcttttttatattctttgttttcatcat
AGAGGCTACCATCTATCTGGTTCCCAAAGCACATCCTGACAGTGCTGACC
CGTGGATAGAATGGAgattatcattttcaatggTGGAAAAAGAAATCATG
CTTAACTTGCCCCACTTGTACCGGAAGGTCTATCTCATCTGCAAGGAGAT
GGCAAATGATTTGAAAGTCAAGAATGTGTATTATTCATACGCTTTGAAAA
CTACTTTCATGTGGCAATGCGAGGCGTGGTCCAAAACAGGCCTTGTATAC
ACATTAGACCACATCTTAGATATGGTACAGAACGTCTTTCAGCGTCTTTA
CAAAGCTCATGAAACGAAAGACCTCCAAAATTACTTTGTTCCCGATATGA
ACTTATTTGAACTGATCTCAGATTCGAAGAAGGAGTCTGTAGCTTCGAAA
AGGAAGGGTTATTGGCACCAAGCGGGCGACGACGGAGATGATAGCACCTT
ACAGAATGATGTATTAGTGAAAGCAGACAAACATCTATTGAACTTACTGA
AGACATACACAGAGAAGGAATCCCTCATTAAGAAAATCATACAAAAAAAC
CAAGTACCTTTCTTTCCCATTGTTTACCAACAAGTTGTAACATCAACTAA
TAATGACCATAGTATTCAACGTGGTGTGGTCATGTGGGACCATCAACCAG
AATATCGTATCCCTAAGAAATATCACCCATCACATTACAACCTGTACAAT
CTTTCTGTTGACATCTCGCACGAAGACCCTGACATGTTAAACCATGAATG
GAATGAGCGCATCCTGACAGAGTTATACATCACTTTTCTTCTTCTGCTTT
CCATAACAAGTTTGCAGCCTCGCACAGGATGTAAAGAGCATTTGATGTAT
GTCTTATACAATATAAGCATCTTTTGGAGAGAGAATCGTCTAAGCCAACA
AAACACAGGAGCAGGATCAACTATTTTTCAGGGAACTGAAGAAGATGCTT
TCGTCAAAATTCTTGAATATTACAAGTCCTTGGCCTTCTATTTCTTTGGT
GAAAAAGATTGGCTATTACAAACACCTGATGCTTTAGGTTACACAGATcc
tctttctgattttttccatCATAAGCAGGATCCTTACATGTGCTTCTTGA
ATCAGGAACTTCCTAAATCCTTCAATTCAGATATGACACCtgaaaagctt
gaaaaatgttGGCTCACTGGAAGCTTGGACGAGGAGATGTttcagatgac
gtcatcaaaagaaaaattgcaatatGTTGAGAAATTCGATAAGAACCTCA
AAAAGAAACGCCTTCTTAAAAGCAAAATCCTTTCCTTTGGAAATGCTGAA
GGATGCAGAAACGTGCAtgaaaaagtttcgaaaaatcCTTTCTACCAGCA
GGATGCAGACTTTCAACCATTGGTGAATCAATTGAACATCAACTGGCAAC
GAAATCTTCGTCAACGGCTTTTGAAGGAGAAAGAAATTCAGGAGAAAGAT
GATAGCAATGAAGAACCTCTCTTCAATGTAAGCCAAAAATATCCGCATAG
TTTCCTCATGAAATGTCTTTTACCACAAATGTGTGAGATGTATAACTATG
GATTCACCAGCAATAAATTCGATTTTCCTACACCAGCTAAATATCTCTCT
TTCGTTATGCAATTTCACACGAATGCGATGgagcatgattttcaaactcg
tcNATTCGATTTTCCTACACCAGCTAAATATCTCTCTTTCGTTATGCAAT
TTCACACGAATGCGATGGAGCATGATTTACAAACTCGTCAGGCAGCTAAA
GAAGAGTCCAAACGTCTACAAAAATGGGGTTATTGCGTTCCCGAGGATGA
CGACGTAGTGTTACGTACTTACGATAAACGTTTGCATAACACCTTTCTAC
TTTCGTGTGAGTCAGTAATTTGAACTACAGATATTGAAGAAGTTACTTTA
AGGACAGTTTCACGACTGGATACATTTTAAGAACTTGTTACCATACATAG
TGGGCTTTTGGTGTTTTGGGTCGAAAATTTCTTGGTGGGATTTGGAAATT
ATCAGGTTTCAGGTGGAAGAAACAAGTTGAGGTGGGGATTAATTTTTTTA
GGtgggatttttggtgttttggtaaAAGTTTATGTTAGTTTTTATTTCCA
AtttaatcatatttttttctaaattatatATTCATTCTATTAATAGTTCT
TTTACCATACttagctttttttattataCTGTAAGAGTTTTTGTTTCgtt
cctcgaattagtataatTTTTCGTGGGGATAGCATtcttagctgggatct
gggagtctcgattgagggtgggaattttaggtttaggtgggacctgaatt
tttaGGTGGGACAAATAATTGTATTAAGGCgaaaccaatttaatttgttg
ttctacgggcagatcgttagcaaaatatgagtcgggcggtcggtaaaata
aaaataagatttgcattAATCAAGGAAGGGctttaagtaatattttcaaa
taaacttGGTCGaaaattgtaataaaatctttcgtGCATAGAATTCATGA
TTATAgattcttttcaactttttttaactgtaaatctctttaatgacttt
tattagaaatttgtggcataggaaatccaaatttttatattttttcgttT
GCAGTAAATGATGGGTCGGtcgccattgtttaggtaccaaaaactgagcc
tgcacaTGCTTATAAactttatgcttataaaagaaaaaacatgtatacat
tttctgtaaggcaaactattcctgaatctgaaaattcaaaaattgcattg
aaaaaattgatgaagaagaaaatgaagacatttgcaAAGACAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062371TCONS_00062371Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062371-proteinTCONS_00062371-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:22832..33225 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.36	0.39	0.37	0.27	0.18	0.18	0.68	0.7	0.35	0.61	0.21	0.43	2.09	1.82	2.07	2.5	0.64	0.7	1.82	2.29	0.44	0.41	0.37	0.52	0.79	0.62	2.98	2.41	0.81	0.92