XLOC_039084 (gene) - C. hemisphaerica

Overview
NameXLOC_039084
Unique NameXLOC_039084
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_364:22832..33225+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039084 ID=XLOC_039084|Name=XLOC_039084|organism=Clytia hemisphaerica|type=gene|length=10394bp|location=Sequence derived from alignment at scaffold_364:22832..33225+ (Clytia hemisphaerica)
gaaaaatatgaAAGTTGAATTTGATAACAATTTATCTACTGGCGacgggt gacgaaattttgtgAAGACTTAGCCGtaagttttgttttatttttataag tcattgaattcatttgtACATTTACAAATGGCCAAGGCAGAACTACCTTA AGTGTATTATGGAGTATTCCATGtaaggtaagtgacctaccgttAGGTGT GGCcatattgagtttaaagccccggaGGAGCTAGAAGaggaattttcaac tttttcaggcaagaaaaaatgaaccCCAAGATTTGCGCTGTATTTAGAAT GACGGATTGAACCTagccctttctttgtttttgcgcgaaacatttttcaa aatctggcgataggttttactttcaatctggcgattatgtaaaaaaaaga aCCGTGCgttttagatgggaaataagtcgTTTCATTTCCAAGAGTTTCGG ATCTAGTCCCCTTCAGTGCTTTGAAATCAAGAGATGTCGCTATGCGTTTT TTCAGGTTTCTTAAAGTGAATTGTGAGTGTCGTACGTAGAAAGCGAAAGT AAGCTAGTAAGAATAAAGAAGATTTTGGACAGACTTTGGGAagattttac cattttttactaaaatagatAAAAGTTTTTAAGAAATTCACTACGAATTA TTAGTTACTTTTTGGGTGTAAAATTCATACTCTCGAAACTTTTTTGCGTT TCGCGAGGAAATTAGCTTTTGCAAATTAGCGAAAGCTACAATgttcttcg tgtgcacagactttttaaaatgatttcaaacgagtggtgagaaaaatttt gggATAATGAGGATAGCGAGGATACTGAGGGTAGCGAGGATAGTGAGGGT AGTGAGGATAGTGAAGACAATGAGGGTAATGAGGATAGTGGGTACAATAA GGATAGCGAGGATAGTAAagatacaatcatggtcgaaatcaattgagaat ttaaagcttatttaatcggatatttcaatttggttcgggtttatagactt ccaggccttattggaccatgtcttaagtctcatgttaaaactcagagtta aaactctacccttccaacctgaAATGAAAATAGCGAGGATACTGAGGGTA ATGAAGCTAACTGTAAATGTAAACATGTGGTAACCATGATACAATTCGAC CGCGTGGTGCCGTGATGCGATTCGCCATTTTTGAGgggggtccataatgg ggtccataaaaattttcgctgaatcagcaaaaacggcaaatcctgtcttt tttttgcaaaatgtaggatataaataactttaaagcttaatattttcagt taagctgtttttctaaaattttcacagcatattACACACATGAATCATAG TCACTATAAAAAACCcaggtctggcaatgtattgttttagctttttgttc aattttcttttgttgcaAATAAAAGACAAGTTGTGagttgcatacttttt gatcacgttaccaaaatctcctcttgggattggtctattttctaatcaca tgatcaaaaagtttgcaaaataaatcgatttcttttaacaaaaaaaaaga gacaaaagccttctaGACCAGTGTTTATTCAAGGAACTTGGTTTATTATG ACTACGCATGAATGGAAccattttcgaaagaaattggttttcagaaactt aaTTTAGAAGTCGTTAACCCTTTAATTACcgcggtcatttttttctaatt tttttaaagaaaatcgcttgttcaaaccatggaggtataaagaaagacag gagaagtatgctattgtaaccaagctcgccctacgattaaaaaagttacg atgtatgcatgctcataatctcatatatcNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNggcgagcttagaatttcttttgatacattttataaaa gaaatcaaaagactttaacgaccaattaccgacacattcaactcctgttt tctttatacctctatgttCAAACCaaagtataagaaagccgcgacTGGAA TATGTactgcattgtcttttcagttaattgatGTTCCATCTATGTCTCCG agatttataagaacatcaagatgctcggtttattattggtagatagtttt tggaatttttctcttattttccttcacaaaaagtttttttattgctagat atctttgaatctgtacccaatagaacacttaaactaattttggacatatt ttatatatattttaataatagtttttcgccaaaattcagattataagaac tatattcaagaatAAGAACTTttctgtcagtttgaatgatagattttgaa ggtgctggcttgaaattttcacagtattatcttgatgtacgttttcaatg atttctaaaaagatttcactgaaatattgtgaaggcattagGCACgttat aaatttttgatttcttttagcCCAGCCAtcttgtgcttgtttaaatttct tattgttgatctttcctttacaatgattttgtGATGCAAGTGTGTTATCA aaggcatatcattaatgtctaaaatgcactgagaagtaagtattcatgac aaaccaataaaatttacctttaaagatgctacattaccgATTTCTTggtc aacaaatagtcatcaaatacgacagagatagaacaacagaaattcagata ttatcattccagccgcggctttcttatactatgttcaaactttaaaggct tatatctccggatctagaaggagttagaagcctgttcatagctcgttgga tagcttagagtctcctcttccTTTTAAGCGCCTacgctgcgcggacctgc ctgaatgattgaaaggtaaaacttcaaattaattcgctagaggacagaac caagtaaaacagggccaattttggaggttcttgaatCGCTCGTTGACAAG AGATGTcgaaaaacggtcaaaatcttaaaaaagtggatttttgtcaaatt tttgcatattttttgtCTGTTTGGCTCAAAAtatcgctggaaagactcac ttttgatttttttgcttgaccatgaaacccaatccaattcctacgagtta gaccatgacgatttctaactcaaactgggcattattTAGCCCATGTCTAG TATACCCGTCATTGGTActtaaatattttataaaaatcataaattttacg tCCTttgggtcgtaaatttaagggaaaacaaaaTTATGTTTATAGTTTCA TCACcttttaccactgggcttaataatttgattttaactacacctacgtt ttgggggtcccaaacctgcgttttaacaaccaggggtatactgtaaaaat ttcatcaaacaaatttatgcccaaaaccctctaagtcaaatttccaaact atggtcgAAATTTCGTATTCATATCTTATCTTATTTAAAGATCTCGAGAG ATCACTAAGATTACAAACCTActttttgggggccattagaaaaaagctac ctatctttaagcgattgaaaaatattgttgaaattgaaaattttgaaaaa gaactttcggaaaataaagtagagatgttaaagttttgcatGCAGCAAAG TTTTTGTAAAGCCTTTTTTCCTCTAGATTCGAGAGAAATTTagatttgat cgacgttttggggatCACATACTGTAGATCTGAAAGACAAAATAACATAC AAAGACACTTCATAAAGAGAACAATTTATCAAAAGGTTTGTCTTAACAAG CCTAATAAATCTTTTAATTAAATAGCTTACGTCAAGTTTTGTCAGTTAGT ATGATTGGTTCGTATCCAATAACTATAGGCGTGCTAATTGCTAACATAGT AgatgttttttatcaatttatctTTCTCAGAAAACTTGAGTGCTTTCTCG AAAAGgaaggggtaattttttgtttattattagtTGTCAGTTACTAGtgt acatgatttttttgtttgtgtttttaTATTTGGATATAGGAAAATGAGTG TTTTTAGAACACAAGAATTTAGTAGCTGAAACTCTAGGATCACAGAATTT AGGATATGTGCACATTAAACGTTGCAGGCCTTCTTCATCACAAAATTTGT CTCGAATCTGaattaaaattataacaaaTAGATAGGAAAAAGATATAGAA AGGTGCACATCACATTGCTTCTACCGTTCTATCTTCTATCGTTCTATTTC CAACCAATGAGTTTGAATTAGAGATTCCTTTCAGATAATTTTTATAGAAA CAATGACAGAAACAACTTATGATTCAATGTTGCAATTTGAAATAGACGGA GAACATCCTCCTCCACTAGAAGAACTTTTAATGGATAAATATGATGAGTA TAGAAGATGTTTACTGTCGACGGAGTTGGACGATCAACAGCTCCAAAAAA TGGTCCAATTCATCTTGAAGACGCGCTCTTACCAAGCTTGTTTCTTCCAA GATGAGAACACTGATAGCCTCGATCTGATTAAAACGAAAGCTCCCATCAG TTATTTGATGTTCCCCATAGCAACAAAAGCTATCAAGACAGGGAGCCGTT CAGAACAAGTCTACTTACAAGACTCTGATGTTGATTACATTTATGAGATT GGCCCTCTGCTGGTGGAAGAAGTTAGCCTGCtgaataaaataataaattt gcGAAAGCATAGCCTATGGTACAAAGAAACAAAGCATGCTGGGTTTTACA CCGTCATAGATGACGAGGGTGGACATATAGCAGCAGTTGCAATGCAAGCT AAAATTGATTCTTCAGCAAAGTCAATCAAGTTGGTAAGTAAGCCGTATTA aaccttaaccctttaagtgccatggtcatttttttctaagttttttaaag aaaatcgctagttcaaactttaaaggcttatatctccggatctagaagga gttagttTATAGTCCGTTGGATAGCTGAGAGTCTCATCTTTCTTTTAGGC GCGGCGGCTGAGGGGGAGGGGTAGGTAAGGGAAGCAGACTGTGGACCtac ctgaatgatagaaaggtggtAAAACTTTAAATcactggaggacagaatca agtaaatcagggccaaatttggaggttcttggatcactcgttgaccaaaa atggtcaaaaaacggtcaaaatcttacaaaagtggatttttgtcaaatgt ttgcatttttttgactttttaccttaaaatctcgctgaaaagactcactt tcgatttttttttatgcTTCAACATAAAGcccaatctaattcctacgagt tagaccaaaaataacgatttctaactcaaactgggcactACATTACCTAt ttctgatatatacgacattggcacttaaagggttaatgatATCCTAAAAT ACAAGCCATCTAAATACATTTgagtttttgtttgattttttggaaGGTTA ACCAACATATCTGAGTGTTAGTTAGTCTGAAATTTGGTACGTGGCAAATC ATACGCAATTTTCACCCTATTAAaatagtttttgagttttattttttctt cgttAGCTTTCAGAACGTAAGGAAGTTTCAGCAGTTTTAAccaccaatca aaacgctgaagATGATAAGGATGACGATTCACTTGGTGAAGATAGGGTCA TTGCATTACCTTTGAAACAATGGCCTCCACCTAATTGGAAGTCATTTAGC AAAAGAAAGCCTATTTATTTGCAAAGGATCATGGATAAGTTAGAAGGTAA GTAGTTCAATCCTCTCTGATTTCACTGTTCGGTTTTGGAAAAACTActag aaaatgtttttagatctaatcatgaaggtaataaagatagatggagagta AATACcgcttttgttctattctgatttatcatcggaagcaaacagctgtt tggttgctttgggaataagacgATTAATTTCTGGTATACTCGTGGggata tttaagatgaatgaaaagacattacatttttaacaagtatattgaaatat aatagccttgtcatgaaaaattgaaaaaaacttcacataataagcacaat acNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNtttgtcagagtatgaaaaccgctgcccacttagac gtgaagattttaagataagaaactttcaatgataatgtgatgcgactctc aatgttcacaaaatgccaccctaaaaatatatccttatgaaattaatata ttcttttatccttaaatcagttgaaactatttcgaatcgcattttaagta agatttctcgcaaaattaagtttttcaaaatcaacggaccagcctctttc tgttcttataaacttaTAAATTGATGtgttttgcttccaatgatggtaca tcaaagaaaagccgctttgaatagatttataaaagatttcaacggccatt taggtcattaccgagacgttttctctccatctgaatctttattaccttca tgatctaatgggctcttccagaagaaatttgaaaatatcctatatatcct ccaccctccatgcacaaaaactttctggaagagcccaatagaAGAATAGT TTTGTTAAGATGTTAAGAATATGCGTTGAAATTGTTGAATATACTTGGCT ATCGCCAATACCTATCCATTGGAATACAATAGGATTCTTCAACATCTCAT CATTGGATATTTTAATgattaatcttttttatattctttgttttcatcat AGAGGCTACCATCTATCTGGTTCCCAAAGCACATCCTGACAGTGCTGACC CGTGGATAGAATGGAgattatcattttcaatggTGGAAAAAGAAATCATG CTTAACTTGCCCCACTTGTACCGGAAGGTCTATCTCATCTGCAAGGAGAT GGCAAATGATTTGAAAGTCAAGAATGTGTATTATTCATACGCTTTGAAAA CTACTTTCATGTGGCAATGCGAGGCGTGGTCCAAAACAGGCCTTGTATAC ACATTAGACCACATCTTAGATATGGTACAGAACGTCTTTCAGCGTCTTTA CAAAGCTCATGAAACGAAAGACCTCCAAAATTACTTTGTTCCCGATATGA ACTTATTTGAACTGATCTCAGATTCGAAGAAGGAGTCTGTAGCTTCGAAA AGGAAGGGTTATTGGCACCAAGCGGGCGACGACGGAGATGATAGCACCTT ACAGAATGATGTATTAGTGAAAGCAGACAAACATCTATTGAACTTACTGA AGACATACACAGAGAAGGAATCCCTCATTAAGAAAATCATACAAAAAAAC CAAGTACCTTTCTTTCCCATTGTTTACCAACAAGTTGTAACATCAACTAA TAATGACCATAGTATTCAACGTGGTGTGGTCATGTGGGACCATCAACCAG AATATCGTATCCCTAAGAAATATCACCCATCACATTACAACCTGTACAAT CTTTCTGTTGACATCTCGCACGAAGACCCTGACATGTTAAACCATGAATG GAATGAGCGCATCCTGACAGAGTTATACATCACTTTTCTTCTTCTGCTTT CCATAACAAGTTTGCAGCCTCGCACAGGATGTAAAGAGCATTTGATGTAT GTCTTATACAATATAAGCATCTTTTGGAGAGAGAATCGTCTAAGCCAACA AAACACAGGAGCAGGATCAACTATTTTTCAGGGAACTGAAGAAGATGCTT TCGTCAAAATTCTTGAATATTACAAGTCCTTGGCCTTCTATTTCTTTGGT GAAAAAGATTGGCTATTACAAACACCTGATGCTTTAGGTTACACAGATcc tctttctgattttttccatCATAAGCAGGATCCTTACATGTGCTTCTTGA ATCAGGAACTTCCTAAATCCTTCAATTCAGATATGACACCtgaaaagctt gaaaaatgttGGCTCACTGGAAGCTTGGACGAGGAGATGTttcagatgac gtcatcaaaagaaaaattgcaatatGTTGAGAAATTCGATAAGAACCTCA AAAAGAAACGCCTTCTTAAAAGCAAAATCCTTTCCTTTGGAAATGCTGAA GGATGCAGAAACGTGCAtgaaaaagtttcgaaaaatcCTTTCTACCAGCA GGATGCAGACTTTCAACCATTGGTGAATCAATTGAACATCAACTGGCAAC GAAATCTTCGTCAACGGCTTTTGAAGGAGAAAGAAATTCAGGAGAAAGAT GATAGCAATGAAGAACCTCTCTTCAATGTAAGCCAAAAATATCCGCATAG TTTCCTCATGAAATGTCTTTTACCACAAATGTGTGAGATGTATAACTATG GATTCACCAGCAATAAATTCGATTTTCCTACACCAGCTAAATATCTCTCT TTCGTTATGCAATTTCACACGAATGCGATGgagcatgattttcaaactcg tcNATTCGATTTTCCTACACCAGCTAAATATCTCTCTTTCGTTATGCAAT TTCACACGAATGCGATGGAGCATGATTTACAAACTCGTCAGGCAGCTAAA GAAGAGTCCAAACGTCTACAAAAATGGGGTTATTGCGTTCCCGAGGATGA CGACGTAGTGTTACGTACTTACGATAAACGTTTGCATAACACCTTTCTAC TTTCGTGTGAGTCAGTAATTTGAACTACAGATATTGAAGAAGTTACTTTA AGGACAGTTTCACGACTGGATACATTTTAAGAACTTGTTACCATACATAG TGGGCTTTTGGTGTTTTGGGTCGAAAATTTCTTGGTGGGATTTGGAAATT ATCAGGTTTCAGGTGGAAGAAACAAGTTGAGGTGGGGATTAATTTTTTTA GGtgggatttttggtgttttggtaaAAGTTTATGTTAGTTTTTATTTCCA AtttaatcatatttttttctaaattatatATTCATTCTATTAATAGTTCT TTTACCATACttagctttttttattataCTGTAAGAGTTTTTGTTTCgtt cctcgaattagtataatTTTTCGTGGGGATAGCATtcttagctgggatct gggagtctcgattgagggtgggaattttaggtttaggtgggacctgaatt tttaGGTGGGACAAATAATTGTATTAAGGCgaaaccaatttaatttgttg ttctacgggcagatcgttagcaaaatatgagtcgggcggtcggtaaaata aaaataagatttgcattAATCAAGGAAGGGctttaagtaatattttcaaa taaacttGGTCGaaaattgtaataaaatctttcgtGCATAGAATTCATGA TTATAgattcttttcaactttttttaactgtaaatctctttaatgacttt tattagaaatttgtggcataggaaatccaaatttttatattttttcgttT GCAGTAAATGATGGGTCGGtcgccattgtttaggtaccaaaaactgagcc tgcacaTGCTTATAAactttatgcttataaaagaaaaaacatgtatacat tttctgtaaggcaaactattcctgaatctgaaaattcaaaaattgcattg aaaaaattgatgaagaagaaaatgaagacatttgcaAAGACAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062371TCONS_00062371Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062371-proteinTCONS_00062371-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:22832..33225 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.36 0.39 0.37 0.27 0.18 0.18 0.68 0.7 0.35 0.61 0.21 0.43 2.09 1.82 2.07 2.5 0.64 0.7 1.82 2.29 0.44 0.41 0.37 0.52 0.79 0.62 2.98 2.41 0.81 0.92